RNA–Protein interactions for RNA: ENST00000555017.5

SEC23A-208, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 4

Gene SEC23A, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-208ENST00000555017 BBOX1O75936 387 aa3.8□□□□□ -1.8
SEC23A-208ENST00000555017 RAD17O75943 681 aa3.8□□□□□ -1.8
SEC23A-208ENST00000555017 PRAMEF1O95521 474 aa3.8□□□□□ -1.8
SEC23A-208ENST00000555017 IFIT1P09914 478 aaKnown RBP3.8□□□□□ -1.8
SEC23A-208ENST00000555017 SLC5A1P13866 664 aa3.8□□□□□ -1.8
SEC23A-208ENST00000555017 ITGB5P18084 799 aa3.8□□□□□ -1.8
SEC23A-208ENST00000555017 ATP5JP18859 108 aa3.8□□□□□ -1.8
SEC23A-208ENST00000555017 CHMLP26374 656 aa3.8□□□□□ -1.8
SEC23A-208ENST00000555017 PRDX5P30044 214 aa3.8□□□□□ -1.8
SEC23A-208ENST00000555017 CTSKP43235 329 aa3.8□□□□□ -1.8
SEC23A-208ENST00000555017 KCNJ4P48050 445 aa3.8□□□□□ -1.8
SEC23A-208ENST00000555017 GIPRP48546 466 aa3.8□□□□□ -1.8
SEC23A-208ENST00000555017 HK2P52789 917 aa3.8□□□□□ -1.8
SEC23A-208ENST00000555017 PTH1RQ03431 593 aa3.8□□□□□ -1.8
SEC23A-208ENST00000555017 PUM3Q15397 648 aaKnown RBP3.8□□□□□ -1.8
SEC23A-208ENST00000555017 VPS53Q5VIR6 699 aa3.8□□□□□ -1.8
SEC23A-208ENST00000555017 ZNF746Q6NUN9 644 aaPredicted RBP3.8□□□□□ -1.8
SEC23A-208ENST00000555017 SLC23A3Q6PIS1 610 aa3.8□□□□□ -1.8
SEC23A-208ENST00000555017 CWC27Q6UX04 472 aaKnown RBP3.8□□□□□ -1.8
SEC23A-208ENST00000555017 DPP8Q6V1X1 898 aaPredicted RBP3.8□□□□□ -1.8
SEC23A-208ENST00000555017 ZNF589Q86UQ0 364 aaPredicted RBP3.8□□□□□ -1.8
SEC23A-208ENST00000555017 ERC1Q8IUD2 1116 aa3.8□□□□□ -1.8
SEC23A-208ENST00000555017 TTLL6Q8N841 843 aa3.8□□□□□ -1.8
SEC23A-208ENST00000555017 MIGA1Q8NAN2 632 aa3.8□□□□□ -1.8
SEC23A-208ENST00000555017 SPATA5Q8NB90 893 aa3.8□□□□□ -1.8
SEC23A-208ENST00000555017 RBBP8NLQ8NC74 664 aaPredicted RBP3.8□□□□□ -1.8
SEC23A-208ENST00000555017 PIWIL2Q8TC59 973 aaKnown RBP3.8□□□□□ -1.8
SEC23A-208ENST00000555017 LPIN2Q92539 896 aa3.8□□□□□ -1.8
SEC23A-208ENST00000555017 ASPNQ9BXN1 380 aa3.8□□□□□ -1.8
SEC23A-208ENST00000555017 HDAC8Q9BY41 377 aa3.8□□□□□ -1.8
SEC23A-208ENST00000555017 FOXP3Q9BZS1 431 aa3.8□□□□□ -1.8
SEC23A-208ENST00000555017 CCSER2Q9H7U1 834 aa3.8□□□□□ -1.8
SEC23A-208ENST00000555017 SP110Q9HB58 689 aa3.8□□□□□ -1.8
SEC23A-208ENST00000555017 CD209Q9NNX6 404 aa3.8□□□□□ -1.8
SEC23A-208ENST00000555017 INCENPQ9NQS7 918 aa3.8□□□□□ -1.8
SEC23A-208ENST00000555017 GFOD1Q9NXC2 390 aa3.8□□□□□ -1.8
SEC23A-208ENST00000555017 DUSP13Q9UII6 198 aa3.8□□□□□ -1.8
SEC23A-208ENST00000555017 DENND2AQ9ULE3 1009 aa3.8□□□□□ -1.8
SEC23A-208ENST00000555017 CTNND2Q9UQB3 1225 aa3.8□□□□□ -1.8
SEC23A-208ENST00000555017 ECM29Q5VYK3 1845 aa3.79□□□□□ -1.8
SEC23A-208ENST00000555017 TIAM2Q8IVF5 1701 aa3.79□□□□□ -1.8
SEC23A-208ENST00000555017 ASTN2O75129 1339 aaPredicted RBP3.79□□□□□ -1.8
SEC23A-208ENST00000555017 XDHP47989 1333 aa3.79□□□□□ -1.8
SEC23A-208ENST00000555017 CYP2D7A0A087X1C5 515 aa3.79□□□□□ -1.8
SEC23A-208ENST00000555017 FKTNO75072 461 aa3.79□□□□□ -1.8
SEC23A-208ENST00000555017 IDH1O75874 414 aaKnown RBP3.79□□□□□ -1.8
SEC23A-208ENST00000555017 CPA1P15085 419 aa3.79□□□□□ -1.8
SEC23A-208ENST00000555017 ATF4P18848 351 aaPredicted RBP3.79□□□□□ -1.8
SEC23A-208ENST00000555017 ALDH1B1P30837 517 aa3.79□□□□□ -1.8
SEC23A-208ENST00000555017 HIBADHP31937 336 aaKnown RBP3.79□□□□□ -1.8
SEC23A-208ENST00000555017 ETFBP38117 255 aa3.79□□□□□ -1.8
SEC23A-208ENST00000555017 CACNB3P54284 484 aa3.79□□□□□ -1.8
SEC23A-208ENST00000555017 EIF6P56537 245 aaKnown RBP3.79□□□□□ -1.8
SEC23A-208ENST00000555017 EGR3Q06889 387 aa3.79□□□□□ -1.8
SEC23A-208ENST00000555017 UBE4AQ14139 1066 aa3.79□□□□□ -1.8
SEC23A-208ENST00000555017 KIR3DS1Q14943 382 aa3.79□□□□□ -1.8
SEC23A-208ENST00000555017 PPP2R5EQ16537 467 aa3.79□□□□□ -1.8
SEC23A-208ENST00000555017 TIGD5Q53EQ6 642 aa3.79□□□□□ -1.8
SEC23A-208ENST00000555017 HSP90AB4PQ58FF6 505 aa3.79□□□□□ -1.8
SEC23A-208ENST00000555017 DALRD3Q5D0E6 543 aaKnown RBP3.79□□□□□ -1.8
SEC23A-208ENST00000555017 BMP2KLQ5H9B9 411 aa3.79□□□□□ -1.8
SEC23A-208ENST00000555017 CCDC158Q5M9N0 1113 aa3.79□□□□□ -1.8
SEC23A-208ENST00000555017 LCE4AQ5TA78 99 aa3.79□□□□□ -1.8
SEC23A-208ENST00000555017 TTLL5Q6EMB2 1281 aa3.79□□□□□ -1.8
SEC23A-208ENST00000555017 THAP5Q7Z6K1 395 aa3.79□□□□□ -1.8
SEC23A-208ENST00000555017 TTC6Q86TZ1 520 aa3.79□□□□□ -1.8
SEC23A-208ENST00000555017 MAGEB6Q8N7X4 407 aa3.79□□□□□ -1.8
SEC23A-208ENST00000555017 TDRD7Q8NHU6 1098 aaKnown RBP3.79□□□□□ -1.8
SEC23A-208ENST00000555017 BRF1Q92994 677 aa3.79□□□□□ -1.8
SEC23A-208ENST00000555017 OSBP2Q969R2 916 aa3.79□□□□□ -1.8
SEC23A-208ENST00000555017 ANAPC16Q96DE5 110 aa3.79□□□□□ -1.8
SEC23A-208ENST00000555017 TCTN2Q96GX1 697 aa3.79□□□□□ -1.8
SEC23A-208ENST00000555017 HAUS7Q99871 368 aa3.79□□□□□ -1.8
SEC23A-208ENST00000555017 TINF2Q9BSI4 451 aa3.79□□□□□ -1.8
SEC23A-208ENST00000555017 FSD1Q9BTV5 496 aa3.79□□□□□ -1.8
SEC23A-208ENST00000555017 LGR4Q9BXB1 951 aa3.79□□□□□ -1.8
SEC23A-208ENST00000555017 SRRTQ9BXP5 876 aaKnown RBP3.79□□□□□ -1.8
SEC23A-208ENST00000555017 ANKRD2Q9GZV1 360 aa3.79□□□□□ -1.8
SEC23A-208ENST00000555017 MKRN2Q9H000 416 aaKnown RBP3.79□□□□□ -1.8
SEC23A-208ENST00000555017 PUS7LQ9H0K6 701 aaKnown RBP3.79□□□□□ -1.8
SEC23A-208ENST00000555017 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP3.79□□□□□ -1.8
SEC23A-208ENST00000555017 ARMT1Q9H993 441 aa3.79□□□□□ -1.8
SEC23A-208ENST00000555017 GPR108Q9NPR9 543 aa3.79□□□□□ -1.8
SEC23A-208ENST00000555017 PAG1Q9NWQ8 432 aa3.79□□□□□ -1.8
SEC23A-208ENST00000555017 SUCOQ9UBS9 1254 aaKnown RBP3.79□□□□□ -1.8
SEC23A-208ENST00000555017 ABCF2Q9UG63 623 aa3.79□□□□□ -1.8
SEC23A-208ENST00000555017 FBXL21Q9UKT6 434 aa3.79□□□□□ -1.8
SEC23A-208ENST00000555017 KCNH3Q9ULD8 1083 aa3.79□□□□□ -1.8
SEC23A-208ENST00000555017 PALD1Q9ULE6 856 aa3.79□□□□□ -1.8
SEC23A-208ENST00000555017 HDAC5Q9UQL6 1122 aa3.79□□□□□ -1.8
SEC23A-208ENST00000555017 DICER1Q9UPY3 1922 aaKnown RBP3.79□□□□□ -1.8
SEC23A-208ENST00000555017 MYH1P12882 1939 aa3.78□□□□□ -1.8
SEC23A-208ENST00000555017 MAST3O60307 1309 aa3.78□□□□□ -1.8
SEC23A-208ENST00000555017 TTC41PQ6P2S7 1318 aa3.78□□□□□ -1.8
SEC23A-208ENST00000555017 ZNF541Q9H0D2 1346 aa3.78□□□□□ -1.8
SEC23A-208ENST00000555017 ZNF532Q9HCE3 1301 aa3.78□□□□□ -1.8
SEC23A-208ENST00000555017 TCRBV5S4A2TA0A5A2 114 aa3.78□□□□□ -1.8
SEC23A-208ENST00000555017 IQCJ-SCHIP1C9J366 451 aaPredicted RBP3.78□□□□□ -1.8
SEC23A-208ENST00000555017 RNF113AO15541 343 aaKnown RBP3.78□□□□□ -1.8
SEC23A-208ENST00000555017 PPIP5K2O43314 1243 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms