RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 TOGARAM2Q6ZUX3 1019 aa9.84□□□□□ -0.83
TDP1-210ENST00000554976 EEF2KMTQ96G04 330 aa9.84□□□□□ -0.83
TDP1-210ENST00000554976 NAA15Q9BXJ9 866 aaKnown RBP9.84□□□□□ -0.83
TDP1-210ENST00000554976 ANKEF1Q9NU02 776 aa9.84□□□□□ -0.83
TDP1-210ENST00000554976 DMAC2Q9NW81 257 aa9.84□□□□□ -0.83
TDP1-210ENST00000554976 MGAMO43451 1857 aa9.84□□□□□ -0.83
TDP1-210ENST00000554976 TTC26A0AVF1 554 aa9.84□□□□□ -0.83
TDP1-210ENST00000554976 TESPA1A2RU30 521 aaPredicted RBP9.84□□□□□ -0.83
TDP1-210ENST00000554976 HIP1RO75146 1068 aa9.84□□□□□ -0.83
TDP1-210ENST00000554976 ATP4AP20648 1035 aa9.84□□□□□ -0.83
TDP1-210ENST00000554976 NCKAP1LP55160 1127 aa9.84□□□□□ -0.83
TDP1-210ENST00000554976 TRIM65Q6PJ69 517 aa9.84□□□□□ -0.83
TDP1-210ENST00000554976 FASTKD5Q7L8L6 764 aaKnown RBP9.84□□□□□ -0.83
TDP1-210ENST00000554976 ZNF526Q8TF50 670 aaPredicted RBP9.84□□□□□ -0.83
TDP1-210ENST00000554976 TYW1Q9NV66 732 aaKnown RBP9.84□□□□□ -0.83
TDP1-210ENST00000554976 TMEM150BA6NC51 233 aa9.83□□□□□ -0.84
TDP1-210ENST00000554976 EPHB6O15197 1021 aa9.83□□□□□ -0.84
TDP1-210ENST00000554976 EIF3JO75822 258 aaKnown RBP9.83□□□□□ -0.84
TDP1-210ENST00000554976 SLC25A27O95847 323 aa9.83□□□□□ -0.84
TDP1-210ENST00000554976 NMT1P30419 496 aaKnown RBP9.83□□□□□ -0.84
TDP1-210ENST00000554976 HNRNPH3P31942 346 aaKnown RBP9.83□□□□□ -0.84
TDP1-210ENST00000554976 FKBP1BP68106 108 aa9.83□□□□□ -0.84
TDP1-210ENST00000554976 MTF1Q14872 753 aa9.83□□□□□ -0.84
TDP1-210ENST00000554976 EAPPQ56P03 285 aaPredicted RBP9.83□□□□□ -0.84
TDP1-210ENST00000554976 PADI6Q6TGC4 694 aa9.83□□□□□ -0.84
TDP1-210ENST00000554976 CNGA4Q8IV77 575 aa9.83□□□□□ -0.84
TDP1-210ENST00000554976 SHCBP1Q8NEM2 672 aa9.83□□□□□ -0.84
TDP1-210ENST00000554976 TIPINQ9BVW5 301 aa9.83□□□□□ -0.84
TDP1-210ENST00000554976 IKZF4Q9H2S9 585 aa9.83□□□□□ -0.84
TDP1-210ENST00000554976 NDST4Q9H3R1 872 aa9.83□□□□□ -0.84
TDP1-210ENST00000554976 PARVGQ9HBI0 331 aa9.83□□□□□ -0.84
TDP1-210ENST00000554976 ZHX1Q9UKY1 873 aaPredicted RBP9.83□□□□□ -0.84
TDP1-210ENST00000554976 MAFBQ9Y5Q3 323 aaPredicted RBP9.83□□□□□ -0.84
TDP1-210ENST00000554976 SOWAHDA6NJG2 315 aa9.83□□□□□ -0.84
TDP1-210ENST00000554976 SFI1A8K8P3 1242 aa9.83□□□□□ -0.84
TDP1-210ENST00000554976 PRPF6O94906 941 aaKnown RBP9.83□□□□□ -0.84
TDP1-210ENST00000554976 ERCC3P19447 782 aa9.83□□□□□ -0.84
TDP1-210ENST00000554976 PLS1Q14651 629 aa9.83□□□□□ -0.84
TDP1-210ENST00000554976 CCDC60Q8IWA6 550 aaPredicted RBP9.83□□□□□ -0.84
TDP1-210ENST00000554976 NELFCDQ8IXH7 590 aa9.83□□□□□ -0.84
TDP1-210ENST00000554976 PCYT2Q99447 389 aa9.83□□□□□ -0.84
TDP1-210ENST00000554976 TSG101Q99816 390 aa9.83□□□□□ -0.84
TDP1-210ENST00000554976 NOC4LQ9BVI4 516 aaKnown RBP9.83□□□□□ -0.84
TDP1-210ENST00000554976 POLD4Q9HCU8 107 aa9.83□□□□□ -0.84
TDP1-210ENST00000554976 TMEM51Q9NW97 253 aa9.83□□□□□ -0.84
TDP1-210ENST00000554976 MAGEC2Q9UBF1 373 aaPredicted RBP9.83□□□□□ -0.84
TDP1-210ENST00000554976 ADGRA2Q96PE1 1338 aa9.83□□□□□ -0.84
TDP1-210ENST00000554976 SLC16A3O15427 465 aaKnown RBP9.82□□□□□ -0.84
TDP1-210ENST00000554976 NOL4O94818 638 aa9.82□□□□□ -0.84
TDP1-210ENST00000554976 FGFR1OPO95684 399 aaKnown RBP9.82□□□□□ -0.84
TDP1-210ENST00000554976 GNA14O95837 355 aa9.82□□□□□ -0.84
TDP1-210ENST00000554976 COPB2P35606 906 aa9.82□□□□□ -0.84
TDP1-210ENST00000554976 SNAPC2Q13487 334 aa9.82□□□□□ -0.84
TDP1-210ENST00000554976 ZC2HC1CQ53FD0 456 aaPredicted RBP9.82□□□□□ -0.84
TDP1-210ENST00000554976 RETREG2Q8NC44 543 aa9.82□□□□□ -0.84
TDP1-210ENST00000554976 ANKRD20A12PQ8NF67 263 aa9.82□□□□□ -0.84
TDP1-210ENST00000554976 CDHR1Q96JP9 859 aa9.82□□□□□ -0.84
TDP1-210ENST00000554976 JPH1Q9HDC5 661 aaPredicted RBP9.82□□□□□ -0.84
TDP1-210ENST00000554976 PCDHA10Q9Y5I2 948 aa9.82□□□□□ -0.84
TDP1-210ENST00000554976 FARP2O94887 1054 aaPredicted RBP9.82□□□□□ -0.84
TDP1-210ENST00000554976 KIF20AO95235 890 aa9.82□□□□□ -0.84
TDP1-210ENST00000554976 ACTR2P61160 394 aa9.82□□□□□ -0.84
TDP1-210ENST00000554976 SYCP1Q15431 976 aa9.82□□□□□ -0.84
TDP1-210ENST00000554976 STXBP2Q15833 593 aa9.82□□□□□ -0.84
TDP1-210ENST00000554976 MAP1SQ66K74 1059 aaPredicted RBP9.82□□□□□ -0.84
TDP1-210ENST00000554976 FRMD5Q7Z6J6 570 aa9.82□□□□□ -0.84
TDP1-210ENST00000554976 BAP1Q92560 729 aa9.82□□□□□ -0.84
TDP1-210ENST00000554976 SLC9A2Q9UBY0 812 aa9.82□□□□□ -0.84
TDP1-210ENST00000554976 LOC102724159A0A0B4J2E5 919 aa9.82□□□□□ -0.84
TDP1-210ENST00000554976 TBCAO75347 108 aaKnown RBP9.82□□□□□ -0.84
TDP1-210ENST00000554976 AKAP3O75969 853 aa9.82□□□□□ -0.84
TDP1-210ENST00000554976 KRT18P05783 430 aaKnown RBP9.82□□□□□ -0.84
TDP1-210ENST00000554976 PLS3P13797 630 aa9.82□□□□□ -0.84
TDP1-210ENST00000554976 UBA1P22314 1058 aaKnown RBP9.82□□□□□ -0.84
TDP1-210ENST00000554976 GTF2F1P35269 517 aaKnown RBP eCLIP9.82□□□□□ -0.84
TDP1-210ENST00000554976 IRX3P78415 501 aaPredicted RBP9.82□□□□□ -0.84
TDP1-210ENST00000554976 GTF2BQ00403 316 aa9.82□□□□□ -0.84
TDP1-210ENST00000554976 CDK17Q00537 523 aa9.82□□□□□ -0.84
TDP1-210ENST00000554976 PWP2Q15269 919 aaKnown RBP9.82□□□□□ -0.84
TDP1-210ENST00000554976 SLC9A9Q8IVB4 645 aa9.82□□□□□ -0.84
TDP1-210ENST00000554976 MRPL44Q9H9J2 332 aaKnown RBP9.82□□□□□ -0.84
TDP1-210ENST00000554976 MORF4L1Q9UBU8 362 aa9.82□□□□□ -0.84
TDP1-210ENST00000554976 PPP2R2CQ9Y2T4 447 aa9.82□□□□□ -0.84
TDP1-210ENST00000554976 REXO2Q9Y3B8 237 aaKnown RBP9.82□□□□□ -0.84
TDP1-210ENST00000554976 ANK1P16157 1881 aa9.81□□□□□ -0.84
TDP1-210ENST00000554976 ARHGEF35A5YM69 484 aa9.81□□□□□ -0.84
TDP1-210ENST00000554976 SUPT20HL2P0C7V6 817 aa9.81□□□□□ -0.84
TDP1-210ENST00000554976 OSBPP22059 807 aa9.81□□□□□ -0.84
TDP1-210ENST00000554976 MTIF2P46199 727 aaKnown RBP9.81□□□□□ -0.84
TDP1-210ENST00000554976 ERVK-9P63128 1117 aa9.81□□□□□ -0.84
TDP1-210ENST00000554976 PLA2G4FQ68DD2 849 aa9.81□□□□□ -0.84
TDP1-210ENST00000554976 ANKRD23Q86SG2 305 aa9.81□□□□□ -0.84
TDP1-210ENST00000554976 C12orf56Q8IXR9 622 aa9.81□□□□□ -0.84
TDP1-210ENST00000554976 AFAP1L1Q8TED9 768 aa9.81□□□□□ -0.84
TDP1-210ENST00000554976 BRI3BPQ8WY22 251 aa9.81□□□□□ -0.84
TDP1-210ENST00000554976 IQCDQ96DY2 449 aa9.81□□□□□ -0.84
TDP1-210ENST00000554976 NUP58Q9BVL2 599 aa9.81□□□□□ -0.84
TDP1-210ENST00000554976 XPNPEP1Q9NQW7 623 aa9.81□□□□□ -0.84
TDP1-210ENST00000554976 AGPAT5Q9NUQ2 364 aa9.81□□□□□ -0.84
TDP1-210ENST00000554976 A0A0U1RQJ8 604 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms