RNA–Protein interactions for RNA: ENST00000554600.5

SHMT2-213, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-213ENST00000554600 ATP4AP20648 1035 aa12.01□□□□□ -0.49
SHMT2-213ENST00000554600 HMGN5P82970 282 aaKnown RBP12.01□□□□□ -0.49
SHMT2-213ENST00000554600 PRKCEQ02156 737 aa12.01□□□□□ -0.49
SHMT2-213ENST00000554600 EARS2Q5JPH6 523 aaKnown RBP12.01□□□□□ -0.49
SHMT2-213ENST00000554600 PPP4R3AQ6IN85 833 aa12.01□□□□□ -0.49
SHMT2-213ENST00000554600 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.01□□□□□ -0.494e-7■□□□□ 9.3
SHMT2-213ENST00000554600 RPAINQ86UA6 219 aa12.01□□□□□ -0.49
SHMT2-213ENST00000554600 POTEDQ86YR6 584 aa12.01□□□□□ -0.49
SHMT2-213ENST00000554600 RDM1Q8NG50 284 aa12.01□□□□□ -0.49
SHMT2-213ENST00000554600 ETNPPLQ8TBG4 499 aa12.01□□□□□ -0.49
SHMT2-213ENST00000554600 APBB2Q92870 758 aa12.01□□□□□ -0.49
SHMT2-213ENST00000554600 MBOAT7Q96N66 472 aa12.01□□□□□ -0.49
SHMT2-213ENST00000554600 PPP1R16BQ96T49 567 aa12.01□□□□□ -0.49
SHMT2-213ENST00000554600 CERS4Q9HA82 394 aa12.01□□□□□ -0.49
SHMT2-213ENST00000554600 SEPT9Q9UHD8 586 aaPredicted RBP12.01□□□□□ -0.49
SHMT2-213ENST00000554600 CEP131Q9UPN4 1083 aa12.01□□□□□ -0.49
SHMT2-213ENST00000554600 TRPV2Q9Y5S1 764 aa12.01□□□□□ -0.49
SHMT2-213ENST00000554600 IGSF9BQ9UPX0 1349 aa12.01□□□□□ -0.49
SHMT2-213ENST00000554600 MYO7AQ13402 2215 aa12.01□□□□□ -0.49
SHMT2-213ENST00000554600 RALGAPA2Q2PPJ7 1873 aa12□□□□□ -0.49
SHMT2-213ENST00000554600 UPP2O95045 317 aa12□□□□□ -0.49
SHMT2-213ENST00000554600 OATP04181 439 aa12□□□□□ -0.49
SHMT2-213ENST00000554600 MGAT3Q09327 533 aa12□□□□□ -0.49
SHMT2-213ENST00000554600 LPIN1Q14693 890 aa12□□□□□ -0.49
SHMT2-213ENST00000554600 UGCGQ16739 394 aa12□□□□□ -0.49
SHMT2-213ENST00000554600 FBXO47Q5MNV8 452 aa12□□□□□ -0.49
SHMT2-213ENST00000554600 BANK1Q8NDB2 785 aa12□□□□□ -0.49
SHMT2-213ENST00000554600 FAM20AQ96MK3 541 aa12□□□□□ -0.49
SHMT2-213ENST00000554600 GTF3C3Q9Y5Q9 886 aa12□□□□□ -0.49
SHMT2-213ENST00000554600 KIAA1671Q9BY89 1806 aa12□□□□□ -0.49
SHMT2-213ENST00000554600 DDX11L8A8MPP1 907 aa11.99□□□□□ -0.49
SHMT2-213ENST00000554600 ZBTB42B2RXF5 422 aa11.99□□□□□ -0.49
SHMT2-213ENST00000554600 MAGEB2O15479 319 aa11.99□□□□□ -0.49
SHMT2-213ENST00000554600 ZNF862O60290 1169 aa11.99□□□□□ -0.49
SHMT2-213ENST00000554600 GJB5O95377 273 aa11.99□□□□□ -0.49
SHMT2-213ENST00000554600 IBSPP21815 317 aaPredicted RBP11.99□□□□□ -0.49
SHMT2-213ENST00000554600 IGFBP4P22692 258 aa11.99□□□□□ -0.49
SHMT2-213ENST00000554600 CD52P31358 61 aa11.99□□□□□ -0.49
SHMT2-213ENST00000554600 CALCRLQ16602 461 aa11.99□□□□□ -0.49
SHMT2-213ENST00000554600 MTERF2Q49AM1 385 aa11.99□□□□□ -0.49
SHMT2-213ENST00000554600 NCAPH2Q6IBW4 605 aa11.99□□□□□ -0.49
SHMT2-213ENST00000554600 TSHZ1Q6ZSZ6 1077 aa11.99□□□□□ -0.49
SHMT2-213ENST00000554600 NME8Q8N427 588 aa11.99□□□□□ -0.49
SHMT2-213ENST00000554600 MAFAQ8NHW3 353 aaPredicted RBP11.99□□□□□ -0.49
SHMT2-213ENST00000554600 TNFRSF25Q93038 417 aa11.99□□□□□ -0.49
SHMT2-213ENST00000554600 SCLT1Q96NL6 688 aa11.99□□□□□ -0.49
SHMT2-213ENST00000554600 MAP7D2Q96T17 732 aa11.99□□□□□ -0.49
SHMT2-213ENST00000554600 CELF4Q9BZC1 486 aaKnown RBP11.99□□□□□ -0.49
SHMT2-213ENST00000554600 SUGCTQ9HAC7 445 aa11.99□□□□□ -0.49
SHMT2-213ENST00000554600 KCNMB3Q9NPA1 279 aa11.99□□□□□ -0.49
SHMT2-213ENST00000554600 AKT3Q9Y243 479 aa11.99□□□□□ -0.49
SHMT2-213ENST00000554600 KIF3AQ9Y496 699 aa11.99□□□□□ -0.49
SHMT2-213ENST00000554600 BRWD1Q9NSI6 2320 aa11.99□□□□□ -0.49
SHMT2-213ENST00000554600 FNDC1Q4ZHG4 1894 aaPredicted RBP11.98□□□□□ -0.49
SHMT2-213ENST00000554600 TBX3O15119 743 aa11.98□□□□□ -0.49
SHMT2-213ENST00000554600 C22orf31O95567 290 aa11.98□□□□□ -0.49
SHMT2-213ENST00000554600 VTNP04004 478 aa11.98□□□□□ -0.49
SHMT2-213ENST00000554600 TMOD1P28289 359 aa11.98□□□□□ -0.49
SHMT2-213ENST00000554600 CLCN3P51790 818 aa11.98□□□□□ -0.49
SHMT2-213ENST00000554600 PSMC5P62195 406 aa11.98□□□□□ -0.49
SHMT2-213ENST00000554600 TBC1D8BQ0IIM8 1120 aa11.98□□□□□ -0.49
SHMT2-213ENST00000554600 NFX1Q12986 1120 aaKnown RBP11.98□□□□□ -0.49
SHMT2-213ENST00000554600 PAK2Q13177 524 aa11.98□□□□□ -0.49
SHMT2-213ENST00000554600 PPP2R5CQ13362 524 aa11.98□□□□□ -0.49
SHMT2-213ENST00000554600 KIZQ2M2Z5 673 aa11.98□□□□□ -0.49
SHMT2-213ENST00000554600 TMEM266Q2M3C6 531 aa11.98□□□□□ -0.49
SHMT2-213ENST00000554600 XKR3Q5GH77 459 aa11.98□□□□□ -0.49
SHMT2-213ENST00000554600 EFCAB12Q6NXP0 572 aa11.98□□□□□ -0.49
SHMT2-213ENST00000554600 SLFN12Q8IYM2 578 aa11.98□□□□□ -0.49
SHMT2-213ENST00000554600 KIAA0319LQ8IZA0 1049 aa11.98□□□□□ -0.49
SHMT2-213ENST00000554600 LRRC71Q8N4P6 559 aa11.98□□□□□ -0.49
SHMT2-213ENST00000554600 PPM1EQ8WY54 764 aa11.98□□□□□ -0.49
SHMT2-213ENST00000554600 ARNTL2Q8WYA1 636 aa11.98□□□□□ -0.49
SHMT2-213ENST00000554600 HAS1Q92839 578 aa11.98□□□□□ -0.49
SHMT2-213ENST00000554600 TBC1D32Q96NH3 1257 aa11.98□□□□□ -0.49
SHMT2-213ENST00000554600 YME1L1Q96TA2 773 aa11.98□□□□□ -0.49
SHMT2-213ENST00000554600 RAD9AQ99638 391 aa11.98□□□□□ -0.49
SHMT2-213ENST00000554600 MTUS1Q9ULD2 1270 aa11.98□□□□□ -0.49
SHMT2-213ENST00000554600 CHD9Q3L8U1 2897 aa11.98□□□□□ -0.49
SHMT2-213ENST00000554600 MYH11P35749 1972 aa11.98□□□□□ -0.49
SHMT2-213ENST00000554600 LCHNA4D1U4 455 aa11.97□□□□□ -0.49
SHMT2-213ENST00000554600 TMEM150BA6NC51 233 aa11.97□□□□□ -0.49
SHMT2-213ENST00000554600 EML1O00423 815 aa11.97□□□□□ -0.49
SHMT2-213ENST00000554600 NEMFO60524 1076 aa11.97□□□□□ -0.49
SHMT2-213ENST00000554600 DKC1O60832 514 aaKnown RBP eCLIP11.97□□□□□ -0.49
SHMT2-213ENST00000554600 RPS6KA5O75582 802 aa11.97□□□□□ -0.49
SHMT2-213ENST00000554600 MCM7P33993 719 aa11.97□□□□□ -0.49
SHMT2-213ENST00000554600 TAP1Q03518 808 aa11.97□□□□□ -0.49
SHMT2-213ENST00000554600 MICALL1Q8N3F8 863 aa11.97□□□□□ -0.49
SHMT2-213ENST00000554600 USP38Q8NB14 1042 aa11.97□□□□□ -0.49
SHMT2-213ENST00000554600 FBXO18Q8NFZ0 1043 aa11.97□□□□□ -0.49
SHMT2-213ENST00000554600 TMX3Q96JJ7 454 aa11.97□□□□□ -0.49
SHMT2-213ENST00000554600 ZNF668Q96K58 619 aaPredicted RBP11.97□□□□□ -0.49
SHMT2-213ENST00000554600 SH2D3AQ9BRG2 576 aa11.97□□□□□ -0.49
SHMT2-213ENST00000554600 AGO3Q9H9G7 860 aaKnown RBP11.97□□□□□ -0.49
SHMT2-213ENST00000554600 VAV3Q9UKW4 847 aa11.97□□□□□ -0.49
SHMT2-213ENST00000554600 PADI3Q9ULW8 664 aa11.97□□□□□ -0.49
SHMT2-213ENST00000554600 PCDHA12Q9UN75 941 aa11.97□□□□□ -0.49
SHMT2-213ENST00000554600 INSL6Q9Y581 213 aa11.97□□□□□ -0.49
SHMT2-213ENST00000554600 SQORQ9Y6N5 450 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms