RNA–Protein interactions for RNA: ENST00000554584.5

SYNE2-212, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 20,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-212ENST00000554584 KRT71Q3SY84 523 aa3.55□□□□□ -1.84
SYNE2-212ENST00000554584 MUM1L1Q5H9M0 696 aa3.55□□□□□ -1.84
SYNE2-212ENST00000554584 OLFML2BQ68BL8 750 aa3.55□□□□□ -1.84
SYNE2-212ENST00000554584 RAB3IPQ96QF0 476 aaPredicted RBP3.55□□□□□ -1.84
SYNE2-212ENST00000554584 MTRF1LQ9UGC7 380 aaKnown RBP3.55□□□□□ -1.84
SYNE2-212ENST00000554584 CDV3Q9UKY7 258 aaKnown RBP3.55□□□□□ -1.84
SYNE2-212ENST00000554584 KCTD16Q68DU8 428 aa3.55□□□□□ -1.84
SYNE2-212ENST00000554584 PGBD2Q6P3X8 592 aa3.55□□□□□ -1.84
SYNE2-212ENST00000554584 RPAINQ86UA6 219 aa3.55□□□□□ -1.84
SYNE2-212ENST00000554584 DHRS1Q96LJ7 313 aa3.55□□□□□ -1.84
SYNE2-212ENST00000554584 BTBD9Q96Q07 612 aa3.55□□□□□ -1.84
SYNE2-212ENST00000554584 GSDMAQ96QA5 445 aa3.55□□□□□ -1.84
SYNE2-212ENST00000554584 KLHL3Q9UH77 587 aa3.55□□□□□ -1.84
SYNE2-212ENST00000554584 LPAL2Q16609 132 aa3.55□□□□□ -1.84
SYNE2-212ENST00000554584 DTHD1Q6ZMT9 781 aa3.55□□□□□ -1.84
SYNE2-212ENST00000554584 PPM1KQ8N3J5 372 aa3.55□□□□□ -1.84
SYNE2-212ENST00000554584 XPO4Q9C0E2 1151 aaKnown RBP3.55□□□□□ -1.84
SYNE2-212ENST00000554584 CHURC1-FNTBB4DL54 471 aa3.55□□□□□ -1.84
SYNE2-212ENST00000554584 SLC16A4O15374 487 aa3.55□□□□□ -1.84
SYNE2-212ENST00000554584 LZTS3O60299 673 aaPredicted RBP3.55□□□□□ -1.84
SYNE2-212ENST00000554584 AKT1P31749 480 aa3.55□□□□□ -1.84
SYNE2-212ENST00000554584 CYLC1P35663 651 aaPredicted RBP3.55□□□□□ -1.84
SYNE2-212ENST00000554584 HACE1Q8IYU2 909 aa3.55□□□□□ -1.84
SYNE2-212ENST00000554584 ROGDIQ9GZN7 287 aa3.55□□□□□ -1.84
SYNE2-212ENST00000554584 OSGEPL1Q9H4B0 414 aa3.55□□□□□ -1.84
SYNE2-212ENST00000554584 IL1RL2Q9HB29 575 aa3.55□□□□□ -1.84
SYNE2-212ENST00000554584 EPRSP07814 1512 aaKnown RBP3.55□□□□□ -1.84
SYNE2-212ENST00000554584 LONRF2Q1L5Z9 754 aa3.54□□□□□ -1.84
SYNE2-212ENST00000554584 KIF1BPQ96EK5 621 aa3.54□□□□□ -1.84
SYNE2-212ENST00000554584 PLEKHG3A1L390 1219 aa3.54□□□□□ -1.84
SYNE2-212ENST00000554584 H0Y3Z8 333 aa3.54□□□□□ -1.84
SYNE2-212ENST00000554584 CYP27B1O15528 508 aa3.54□□□□□ -1.84
SYNE2-212ENST00000554584 ATP12AP54707 1039 aa3.54□□□□□ -1.84
SYNE2-212ENST00000554584 TNNC1P63316 161 aa3.54□□□□□ -1.84
SYNE2-212ENST00000554584 PPP1R26Q5T8A7 1209 aaPredicted RBP3.54□□□□□ -1.84
SYNE2-212ENST00000554584 KRT80Q6KB66 452 aa3.54□□□□□ -1.84
SYNE2-212ENST00000554584 RGL4Q8IZJ4 473 aa3.54□□□□□ -1.84
SYNE2-212ENST00000554584 FBXL13Q8NEE6 735 aa3.54□□□□□ -1.84
SYNE2-212ENST00000554584 TUBGCP3Q96CW5 907 aa3.54□□□□□ -1.84
SYNE2-212ENST00000554584 ZSCAN16Q9H4T2 348 aaPredicted RBP3.54□□□□□ -1.84
SYNE2-212ENST00000554584 TSPAN9O75954 239 aa3.54□□□□□ -1.84
SYNE2-212ENST00000554584 CYP2F1P24903 491 aa3.54□□□□□ -1.84
SYNE2-212ENST00000554584 UAP1L1Q3KQV9 507 aa3.54□□□□□ -1.84
SYNE2-212ENST00000554584 FAM133BQ5BKY9 247 aaKnown RBP3.54□□□□□ -1.84
SYNE2-212ENST00000554584 CIAPIN1Q6FI81 312 aa3.54□□□□□ -1.84
SYNE2-212ENST00000554584 RBM41Q96IZ5 413 aaKnown RBP3.54□□□□□ -1.84
SYNE2-212ENST00000554584 SEPT5Q99719 369 aaPredicted RBP3.54□□□□□ -1.84
SYNE2-212ENST00000554584 CCT5P48643 541 aa3.54□□□□□ -1.84
SYNE2-212ENST00000554584 PNOCQ13519 176 aa3.54□□□□□ -1.84
SYNE2-212ENST00000554584 BBOF1Q8ND07 529 aa3.54□□□□□ -1.84
SYNE2-212ENST00000554584 SH3RF3Q8TEJ3 882 aaPredicted RBP3.54□□□□□ -1.84
SYNE2-212ENST00000554584 GIPC2Q8TF65 315 aa3.54□□□□□ -1.84
SYNE2-212ENST00000554584 ZNF512BQ96KM6 892 aaPredicted RBP3.54□□□□□ -1.84
SYNE2-212ENST00000554584 MYCBPQ99417 103 aaPredicted RBP3.54□□□□□ -1.84
SYNE2-212ENST00000554584 ADPGKQ9BRR6 497 aa3.54□□□□□ -1.84
SYNE2-212ENST00000554584 TRPV6Q9H1D0 765 aa3.54□□□□□ -1.84
SYNE2-212ENST00000554584 PLEKHH1Q9ULM0 1364 aa3.54□□□□□ -1.84
SYNE2-212ENST00000554584 KIF1CO43896 1103 aaKnown RBP3.54□□□□□ -1.84
SYNE2-212ENST00000554584 TRIM3O75382 744 aaPredicted RBP3.54□□□□□ -1.84
SYNE2-212ENST00000554584 DGKZQ13574 1117 aa3.54□□□□□ -1.84
SYNE2-212ENST00000554584 TAF1CQ15572 869 aaPredicted RBP3.54□□□□□ -1.84
SYNE2-212ENST00000554584 AARS2Q5JTZ9 985 aaKnown RBP3.54□□□□□ -1.84
SYNE2-212ENST00000554584 SLC27A3Q5K4L6 730 aa3.54□□□□□ -1.84
SYNE2-212ENST00000554584 STRIP1Q5VSL9 837 aa3.54□□□□□ -1.84
SYNE2-212ENST00000554584 AKT1S1Q96B36 256 aa3.54□□□□□ -1.84
SYNE2-212ENST00000554584 PIF1Q9H611 641 aa3.54□□□□□ -1.84
SYNE2-212ENST00000554584 CCDC61Q9Y6R9 512 aa3.54□□□□□ -1.84
SYNE2-212ENST00000554584 RHOBTB3O94955 611 aa3.54□□□□□ -1.84
SYNE2-212ENST00000554584 TRIM27P14373 513 aa3.54□□□□□ -1.84
SYNE2-212ENST00000554584 CSRNP1Q96S65 589 aa3.54□□□□□ -1.84
SYNE2-212ENST00000554584 DBF4Q9UBU7 674 aaPredicted RBP3.54□□□□□ -1.84
SYNE2-212ENST00000554584 PMLP29590 882 aa3.54□□□□□ -1.84
SYNE2-212ENST00000554584 KRT40Q6A162 431 aa3.54□□□□□ -1.84
SYNE2-212ENST00000554584 TMEM154Q6P9G4 183 aa3.54□□□□□ -1.84
SYNE2-212ENST00000554584 AHI1Q8N157 1196 aa3.54□□□□□ -1.84
SYNE2-212ENST00000554584 ANTXR1Q9H6X2 564 aa3.54□□□□□ -1.84
SYNE2-212ENST00000554584 LUC7L2Q9Y383 392 aaKnown RBP3.54□□□□□ -1.84
SYNE2-212ENST00000554584 PFDN1O60925 122 aa3.54□□□□□ -1.84
SYNE2-212ENST00000554584 NME3Q13232 169 aa3.54□□□□□ -1.84
SYNE2-212ENST00000554584 CBFBQ13951 182 aa3.54□□□□□ -1.84
SYNE2-212ENST00000554584 KIF19Q2TAC6 998 aa3.54□□□□□ -1.84
SYNE2-212ENST00000554584 POMZP3Q6PJE2 187 aa3.54□□□□□ -1.84
SYNE2-212ENST00000554584 DNAAF5Q86Y56 855 aa3.54□□□□□ -1.84
SYNE2-212ENST00000554584 DEPDC1BQ8WUY9 529 aa3.54□□□□□ -1.84
SYNE2-212ENST00000554584 HNRNPLLQ8WVV9 542 aaKnown RBP3.54□□□□□ -1.84
SYNE2-212ENST00000554584 HPS3Q969F9 1004 aa3.54□□□□□ -1.84
SYNE2-212ENST00000554584 SGF29Q96ES7 293 aa3.54□□□□□ -1.84
SYNE2-212ENST00000554584 GINM1Q9NU53 330 aa3.54□□□□□ -1.84
SYNE2-212ENST00000554584 DDX19AQ9NUU7 478 aaKnown RBP3.54□□□□□ -1.84
SYNE2-212ENST00000554584 MYH3P11055 1940 aa3.54□□□□□ -1.84
SYNE2-212ENST00000554584 TTC41PQ6P2S7 1318 aa3.54□□□□□ -1.84
SYNE2-212ENST00000554584 LCP1P13796 627 aa3.54□□□□□ -1.84
SYNE2-212ENST00000554584 ARHGDIAP52565 204 aa3.54□□□□□ -1.84
SYNE2-212ENST00000554584 HMGCS2P54868 508 aa3.54□□□□□ -1.84
SYNE2-212ENST00000554584 TYRO3Q06418 890 aa3.54□□□□□ -1.84
SYNE2-212ENST00000554584 AMHR2Q16671 573 aa3.54□□□□□ -1.84
SYNE2-212ENST00000554584 ARMCX5Q6P1M9 558 aa3.54□□□□□ -1.84
SYNE2-212ENST00000554584 SNRNP27Q8WVK2 155 aaKnown RBP3.54□□□□□ -1.84
SYNE2-212ENST00000554584 ARL8AQ96BM9 186 aa3.54□□□□□ -1.84
SYNE2-212ENST00000554584 TSGA10Q9BZW7 698 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms