RNA–Protein interactions for RNA: ENST00000554514.1

ARHGEF40-203, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 2,928 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-203ENST00000554514 SIPA1L1O43166 1804 aa17.16■□□□□ 0.34
ARHGEF40-203ENST00000554514 DDX39AO00148 427 aaKnown RBP17.16■□□□□ 0.34
ARHGEF40-203ENST00000554514 HSF2BPO75031 334 aa17.16■□□□□ 0.34
ARHGEF40-203ENST00000554514 GFPT2O94808 682 aa17.16■□□□□ 0.34
ARHGEF40-203ENST00000554514 FOSP01100 380 aaPredicted RBP17.16■□□□□ 0.34
ARHGEF40-203ENST00000554514 IVLP07476 585 aa17.16■□□□□ 0.34
ARHGEF40-203ENST00000554514 KIAA1755Q5JYT7 1200 aa17.16■□□□□ 0.34
ARHGEF40-203ENST00000554514 MOXD1Q6UVY6 613 aa17.16■□□□□ 0.34
ARHGEF40-203ENST00000554514 ARL8AQ96BM9 186 aa17.16■□□□□ 0.34
ARHGEF40-203ENST00000554514 CCDC43Q96MW1 224 aaKnown RBP17.16■□□□□ 0.34
ARHGEF40-203ENST00000554514 WDR18Q9BV38 432 aa17.16■□□□□ 0.34
ARHGEF40-203ENST00000554514 TYW1Q9NV66 732 aaKnown RBP17.16■□□□□ 0.34
ARHGEF40-203ENST00000554514 RRP15Q9Y3B9 282 aaKnown RBP17.16■□□□□ 0.34
ARHGEF40-203ENST00000554514 QSER1Q2KHR3 1735 aa17.16■□□□□ 0.34
ARHGEF40-203ENST00000554514 PDXKO00764 312 aa17.16■□□□□ 0.34
ARHGEF40-203ENST00000554514 CEP104O60308 925 aa17.16■□□□□ 0.34
ARHGEF40-203ENST00000554514 HSPA1LP34931 641 aa17.16■□□□□ 0.34
ARHGEF40-203ENST00000554514 CYP2J2P51589 502 aa17.16■□□□□ 0.34
ARHGEF40-203ENST00000554514 RPS6KA1Q15418 735 aa17.16■□□□□ 0.34
ARHGEF40-203ENST00000554514 LRCH2Q5VUJ6 765 aa17.16■□□□□ 0.34
ARHGEF40-203ENST00000554514 RINT1Q6NUQ1 792 aa17.16■□□□□ 0.34
ARHGEF40-203ENST00000554514 GBP6Q6ZN66 633 aa17.16■□□□□ 0.34
ARHGEF40-203ENST00000554514 EPM2AIP1Q7L775 607 aaPredicted RBP17.16■□□□□ 0.34
ARHGEF40-203ENST00000554514 IFT20Q8IY31 132 aa17.16■□□□□ 0.34
ARHGEF40-203ENST00000554514 RDH13Q8NBN7 331 aa17.16■□□□□ 0.34
ARHGEF40-203ENST00000554514 AP1M1Q9BXS5 423 aa17.16■□□□□ 0.34
ARHGEF40-203ENST00000554514 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.16■□□□□ 0.34
ARHGEF40-203ENST00000554514 TBX3O15119 743 aa17.15■□□□□ 0.34
ARHGEF40-203ENST00000554514 ZC3H3Q8IXZ2 948 aaKnown RBP17.15■□□□□ 0.34
ARHGEF40-203ENST00000554514 SH2D3CQ8N5H7 860 aa17.15■□□□□ 0.34
ARHGEF40-203ENST00000554514 GMCL1P1Q8NEA9 526 aa17.15■□□□□ 0.34
ARHGEF40-203ENST00000554514 U2AF1L4Q8WU68 220 aaKnown RBP17.15■□□□□ 0.34
ARHGEF40-203ENST00000554514 GMCL1Q96IK5 515 aa17.15■□□□□ 0.34
ARHGEF40-203ENST00000554514 PCDHGC5Q9Y5F6 944 aa17.15■□□□□ 0.34
ARHGEF40-203ENST00000554514 SCN9AQ15858 1988 aa17.15■□□□□ 0.34
ARHGEF40-203ENST00000554514 KRT14P02533 472 aa17.15■□□□□ 0.34
ARHGEF40-203ENST00000554514 EPHA7Q15375 998 aa17.15■□□□□ 0.34
ARHGEF40-203ENST00000554514 SLC35C1Q96A29 364 aa17.15■□□□□ 0.34
ARHGEF40-203ENST00000554514 NAGPAQ9UK23 515 aa17.15■□□□□ 0.34
ARHGEF40-203ENST00000554514 MYO1CO00159 1063 aa17.14■□□□□ 0.33
ARHGEF40-203ENST00000554514 EYA4O95677 639 aa17.14■□□□□ 0.33
ARHGEF40-203ENST00000554514 RPL13P26373 211 aaKnown RBP17.14■□□□□ 0.33
ARHGEF40-203ENST00000554514 STAT2P52630 851 aa17.14■□□□□ 0.33
ARHGEF40-203ENST00000554514 ZIM3Q96PE6 472 aa17.14■□□□□ 0.33
ARHGEF40-203ENST00000554514 C10orf71Q711Q0 1435 aa17.14■□□□□ 0.33
ARHGEF40-203ENST00000554514 RAD51CO43502 376 aa17.14■□□□□ 0.33
ARHGEF40-203ENST00000554514 HLTFQ14527 1009 aaKnown RBP eCLIP17.14■□□□□ 0.33
ARHGEF40-203ENST00000554514 EMBQ6PCB8 327 aa17.14■□□□□ 0.33
ARHGEF40-203ENST00000554514 ARHGAP27Q6ZUM4 889 aa17.14■□□□□ 0.33
ARHGEF40-203ENST00000554514 FAM186BQ8IYM0 893 aa17.14■□□□□ 0.33
ARHGEF40-203ENST00000554514 CASKIN2Q8WXE0 1202 aa17.14■□□□□ 0.33
ARHGEF40-203ENST00000554514 SEPT11Q9NVA2 429 aaKnown RBP17.14■□□□□ 0.33
ARHGEF40-203ENST00000554514 NRXN2Q9P2S2 1712 aa17.14■□□□□ 0.33
ARHGEF40-203ENST00000554514 TULP2O00295 520 aa17.14■□□□□ 0.33
ARHGEF40-203ENST00000554514 TGFB1I1O43294 461 aa17.14■□□□□ 0.33
ARHGEF40-203ENST00000554514 TRIM49P0CI25 452 aa17.14■□□□□ 0.33
ARHGEF40-203ENST00000554514 TRIM49CP0CI26 452 aa17.14■□□□□ 0.33
ARHGEF40-203ENST00000554514 DPY19L2P1Q6NXN4 242 aa17.14■□□□□ 0.33
ARHGEF40-203ENST00000554514 SRLQ86TD4 932 aa17.14■□□□□ 0.33
ARHGEF40-203ENST00000554514 INPP4AQ96PE3 977 aaPredicted RBP17.14■□□□□ 0.33
ARHGEF40-203ENST00000554514 H0YIN7 160 aa17.13■□□□□ 0.33
ARHGEF40-203ENST00000554514 GAS7O60861 476 aa17.13■□□□□ 0.33
ARHGEF40-203ENST00000554514 SLITRK3O94933 977 aa17.13■□□□□ 0.33
ARHGEF40-203ENST00000554514 APBA3O96018 575 aa17.13■□□□□ 0.33
ARHGEF40-203ENST00000554514 ATP1A2P50993 1020 aa17.13■□□□□ 0.33
ARHGEF40-203ENST00000554514 TTMPQ5BVD1 217 aa17.13■□□□□ 0.33
ARHGEF40-203ENST00000554514 SIX2Q9NPC8 291 aa17.13■□□□□ 0.33
ARHGEF40-203ENST00000554514 ABCB4P21439 1286 aa17.13■□□□□ 0.33
ARHGEF40-203ENST00000554514 PLCB1Q9NQ66 1216 aa17.13■□□□□ 0.33
ARHGEF40-203ENST00000554514 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.13■□□□□ 0.33
ARHGEF40-203ENST00000554514 SERPINA10Q9UK55 444 aa17.13■□□□□ 0.33
ARHGEF40-203ENST00000554514 COL11A2P13942 1736 aaPredicted RBP17.12■□□□□ 0.33
ARHGEF40-203ENST00000554514 IGLV3-22A0A075B6J6 115 aa17.12■□□□□ 0.33
ARHGEF40-203ENST00000554514 FLOT1O75955 427 aa17.12■□□□□ 0.33
ARHGEF40-203ENST00000554514 KIF4AO95239 1232 aa17.12■□□□□ 0.33
ARHGEF40-203ENST00000554514 OTOP1Q7RTM1 612 aa17.12■□□□□ 0.33
ARHGEF40-203ENST00000554514 USP38Q8NB14 1042 aa17.12■□□□□ 0.33
ARHGEF40-203ENST00000554514 OPA1O60313 960 aa17.12■□□□□ 0.33
ARHGEF40-203ENST00000554514 CIITAP33076 1130 aa17.12■□□□□ 0.33
ARHGEF40-203ENST00000554514 GNGT1P63211 74 aa17.12■□□□□ 0.33
ARHGEF40-203ENST00000554514 PAK2Q13177 524 aa17.12■□□□□ 0.33
ARHGEF40-203ENST00000554514 TBC1D10BQ4KMP7 808 aaPredicted RBP17.12■□□□□ 0.33
ARHGEF40-203ENST00000554514 CFAP58Q5T655 872 aa17.12■□□□□ 0.33
ARHGEF40-203ENST00000554514 MIGA2Q7L4E1 593 aa17.12■□□□□ 0.33
ARHGEF40-203ENST00000554514 DDX42Q86XP3 938 aaKnown RBP eCLIP17.12■□□□□ 0.33
ARHGEF40-203ENST00000554514 BANK1Q8NDB2 785 aa17.12■□□□□ 0.33
ARHGEF40-203ENST00000554514 POLR3CQ9BUI4 534 aaPredicted RBP17.12■□□□□ 0.33
ARHGEF40-203ENST00000554514 CENPHQ9H3R5 247 aa17.12■□□□□ 0.33
ARHGEF40-203ENST00000554514 METTL14Q9HCE5 456 aaKnown RBP17.12■□□□□ 0.33
ARHGEF40-203ENST00000554514 WRAP73Q9P2S5 460 aaPredicted RBP17.12■□□□□ 0.33
ARHGEF40-203ENST00000554514 RNF14Q9UBS8 474 aa17.12■□□□□ 0.33
ARHGEF40-203ENST00000554514 FEZ2Q9UHY8 353 aaPredicted RBP17.12■□□□□ 0.33
ARHGEF40-203ENST00000554514 SCAF8Q9UPN6 1271 aaKnown RBP17.12■□□□□ 0.33
ARHGEF40-203ENST00000554514 ARHGAP44Q17R89 818 aa17.11■□□□□ 0.33
ARHGEF40-203ENST00000554514 GLE1Q53GS7 698 aaKnown RBP17.11■□□□□ 0.33
ARHGEF40-203ENST00000554514 PEX26Q7Z412 305 aa17.11■□□□□ 0.33
ARHGEF40-203ENST00000554514 DAAM2Q86T65 1068 aa17.11■□□□□ 0.33
ARHGEF40-203ENST00000554514 SH2D3AQ9BRG2 576 aa17.11■□□□□ 0.33
ARHGEF40-203ENST00000554514 CAPS2Q9BXY5 557 aa17.11■□□□□ 0.33
ARHGEF40-203ENST00000554514 PARVGQ9HBI0 331 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms