RNA–Protein interactions for RNA: ENST00000554028.3

TMEM55B-205, humanhuman

TSL 2

Gene TMEM55B, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-205ENST00000554028 ZNF658Q5TYW1 1059 aaPredicted RBP11.62□□□□□ -0.55
TMEM55B-205ENST00000554028 ISM2Q6H9L7 571 aa11.62□□□□□ -0.55
TMEM55B-205ENST00000554028 RINT1Q6NUQ1 792 aa11.62□□□□□ -0.55
TMEM55B-205ENST00000554028 PADI6Q6TGC4 694 aa11.62□□□□□ -0.55
TMEM55B-205ENST00000554028 TLK2Q86UE8 772 aa11.62□□□□□ -0.55
TMEM55B-205ENST00000554028 LRRC15Q8TF66 581 aa11.62□□□□□ -0.55
TMEM55B-205ENST00000554028 ERAP1Q9NZ08 941 aa11.62□□□□□ -0.55
TMEM55B-205ENST00000554028 WRAP73Q9P2S5 460 aaPredicted RBP11.62□□□□□ -0.55
TMEM55B-205ENST00000554028 KCNG1Q9UIX4 513 aa11.62□□□□□ -0.55
TMEM55B-205ENST00000554028 ODF2LQ9ULJ1 636 aa11.62□□□□□ -0.55
TMEM55B-205ENST00000554028 TRIM17Q9Y577 477 aa11.62□□□□□ -0.55
TMEM55B-205ENST00000554028 IGSF9BQ9UPX0 1349 aa11.61□□□□□ -0.55
TMEM55B-205ENST00000554028 BECN2A8MW95 431 aa11.61□□□□□ -0.55
TMEM55B-205ENST00000554028 SEPT4O43236 478 aa11.61□□□□□ -0.55
TMEM55B-205ENST00000554028 ZNF862O60290 1169 aa11.61□□□□□ -0.55
TMEM55B-205ENST00000554028 HBP1O60381 514 aa11.61□□□□□ -0.55
TMEM55B-205ENST00000554028 DUSP11O75319 330 aaKnown RBP11.61□□□□□ -0.55
TMEM55B-205ENST00000554028 DGAT1O75907 488 aa11.61□□□□□ -0.55
TMEM55B-205ENST00000554028 RHOBTB3O94955 611 aa11.61□□□□□ -0.55
TMEM55B-205ENST00000554028 IGHA2P01877 340 aa11.61□□□□□ -0.55
TMEM55B-205ENST00000554028 RARBP10826 455 aa11.61□□□□□ -0.55
TMEM55B-205ENST00000554028 CYBAP13498 195 aa11.61□□□□□ -0.55
TMEM55B-205ENST00000554028 ELNP15502 786 aa11.61□□□□□ -0.55
TMEM55B-205ENST00000554028 GAP43P17677 238 aa11.61□□□□□ -0.55
TMEM55B-205ENST00000554028 GUCY2CP25092 1073 aa11.61□□□□□ -0.55
TMEM55B-205ENST00000554028 TPM4P67936 248 aa11.61□□□□□ -0.55
TMEM55B-205ENST00000554028 CACNB2Q08289 660 aaPredicted RBP11.61□□□□□ -0.55
TMEM55B-205ENST00000554028 MORC3Q14149 939 aa11.61□□□□□ -0.55
TMEM55B-205ENST00000554028 GIT2Q14161 759 aa11.61□□□□□ -0.55
TMEM55B-205ENST00000554028 ANO6Q4KMQ2 910 aa11.61□□□□□ -0.55
TMEM55B-205ENST00000554028 HERC4Q5GLZ8 1057 aaPredicted RBP11.61□□□□□ -0.55
TMEM55B-205ENST00000554028 GJC2Q5T442 439 aaPredicted RBP11.61□□□□□ -0.55
TMEM55B-205ENST00000554028 C1orf186Q6ZWK4 172 aa11.61□□□□□ -0.55
TMEM55B-205ENST00000554028 MCPH1Q8NEM0 835 aa11.61□□□□□ -0.55
TMEM55B-205ENST00000554028 ATP8B4Q8TF62 1192 aa11.61□□□□□ -0.55
TMEM55B-205ENST00000554028 BBXQ8WY36 941 aaPredicted RBP11.61□□□□□ -0.55
TMEM55B-205ENST00000554028 DRC1Q96MC2 740 aa11.61□□□□□ -0.55
TMEM55B-205ENST00000554028 JPH2Q9BR39 696 aaPredicted RBP11.61□□□□□ -0.55
TMEM55B-205ENST00000554028 FUCA2Q9BTY2 467 aa11.61□□□□□ -0.55
TMEM55B-205ENST00000554028 NIFKQ9BYG3 293 aaKnown RBP11.61□□□□□ -0.55
TMEM55B-205ENST00000554028 CYP26B1Q9NR63 512 aa11.61□□□□□ -0.55
TMEM55B-205ENST00000554028 PCDH10Q9P2E7 1040 aa11.61□□□□□ -0.55
TMEM55B-205ENST00000554028 TSKSQ9UJT2 592 aa11.61□□□□□ -0.55
TMEM55B-205ENST00000554028 TRPC6Q9Y210 931 aa11.61□□□□□ -0.55
TMEM55B-205ENST00000554028 GNEQ9Y223 722 aaKnown RBP11.61□□□□□ -0.55
TMEM55B-205ENST00000554028 THSD7BQ9C0I4 1608 aa11.6□□□□□ -0.55
TMEM55B-205ENST00000554028 LCTP09848 1927 aa11.6□□□□□ -0.55
TMEM55B-205ENST00000554028 ZNFX1Q9P2E3 1918 aaKnown RBP11.6□□□□□ -0.55
TMEM55B-205ENST00000554028 A6NJR5 290 aa11.6□□□□□ -0.55
TMEM55B-205ENST00000554028 SMTNL1A8MU46 457 aa11.6□□□□□ -0.55
TMEM55B-205ENST00000554028 GOLGA6L19H0YKK7 550 aa11.6□□□□□ -0.55
TMEM55B-205ENST00000554028 ZBTB39O15060 712 aa11.6□□□□□ -0.55
TMEM55B-205ENST00000554028 MSCO60682 206 aa11.6□□□□□ -0.55
TMEM55B-205ENST00000554028 USO1O60763 962 aaKnown RBP11.6□□□□□ -0.55
TMEM55B-205ENST00000554028 LGALS2P05162 132 aa11.6□□□□□ -0.55
TMEM55B-205ENST00000554028 MMP3P08254 477 aa11.6□□□□□ -0.55
TMEM55B-205ENST00000554028 GRK4P32298 578 aa11.6□□□□□ -0.55
TMEM55B-205ENST00000554028 RFC5P40937 340 aa11.6□□□□□ -0.55
TMEM55B-205ENST00000554028 ZNF165P49910 485 aa11.6□□□□□ -0.55
TMEM55B-205ENST00000554028 POLGP54098 1239 aaPredicted RBP11.6□□□□□ -0.55
TMEM55B-205ENST00000554028 RAD51AP2Q09MP3 1159 aa11.6□□□□□ -0.55
TMEM55B-205ENST00000554028 MTERF2Q49AM1 385 aa11.6□□□□□ -0.55
TMEM55B-205ENST00000554028 ARSHQ5FYA8 562 aa11.6□□□□□ -0.55
TMEM55B-205ENST00000554028 TMEM63BQ5T3F8 832 aa11.6□□□□□ -0.55
TMEM55B-205ENST00000554028 STXBP4Q6ZWJ1 553 aa11.6□□□□□ -0.55
TMEM55B-205ENST00000554028 ANO5Q75V66 913 aa11.6□□□□□ -0.55
TMEM55B-205ENST00000554028 DNAJC5GQ8N7S2 189 aa11.6□□□□□ -0.55
TMEM55B-205ENST00000554028 SLC7A3Q8WY07 619 aa11.6□□□□□ -0.55
TMEM55B-205ENST00000554028 DNAJC19Q96DA6 116 aa11.6□□□□□ -0.55
TMEM55B-205ENST00000554028 PCYT2Q99447 389 aa11.6□□□□□ -0.55
TMEM55B-205ENST00000554028 RUSC1Q9BVN2 902 aa11.6□□□□□ -0.55
TMEM55B-205ENST00000554028 DNAJC25Q9H1X3 360 aa11.6□□□□□ -0.55
TMEM55B-205ENST00000554028 PARVGQ9HBI0 331 aa11.6□□□□□ -0.55
TMEM55B-205ENST00000554028 HMX1Q9NP08 348 aaPredicted RBP11.6□□□□□ -0.55
TMEM55B-205ENST00000554028 LARSQ9P2J5 1176 aaKnown RBP11.6□□□□□ -0.55
TMEM55B-205ENST00000554028 SEL1LQ9UBV2 794 aa11.6□□□□□ -0.55
TMEM55B-205ENST00000554028 NPHP3-ACAD11A0A0J9YXS1 232 aa11.59□□□□□ -0.55
TMEM55B-205ENST00000554028 H3BRB1 525 aa11.59□□□□□ -0.55
TMEM55B-205ENST00000554028 KLRC4O43908 158 aa11.59□□□□□ -0.55
TMEM55B-205ENST00000554028 MARK3P27448 753 aa11.59□□□□□ -0.55
TMEM55B-205ENST00000554028 NPEPPSP55786 919 aa11.59□□□□□ -0.55
TMEM55B-205ENST00000554028 TBC1D8BQ0IIM8 1120 aa11.59□□□□□ -0.55
TMEM55B-205ENST00000554028 DPCR1Q3MIW9 517 aa11.59□□□□□ -0.55
TMEM55B-205ENST00000554028 ZNF484Q5JVG2 852 aa11.59□□□□□ -0.55
TMEM55B-205ENST00000554028 L1TD1Q5T7N2 865 aaKnown RBP11.59□□□□□ -0.55
TMEM55B-205ENST00000554028 PLA2G4FQ68DD2 849 aa11.59□□□□□ -0.55
TMEM55B-205ENST00000554028 MYCT1Q8N699 235 aa11.59□□□□□ -0.55
TMEM55B-205ENST00000554028 SLC17A8Q8NDX2 589 aa11.59□□□□□ -0.55
TMEM55B-205ENST00000554028 FAM200AQ8TCP9 573 aa11.59□□□□□ -0.55
TMEM55B-205ENST00000554028 KIFAP3Q92845 792 aa11.59□□□□□ -0.55
TMEM55B-205ENST00000554028 REEP2Q9BRK0 252 aa11.59□□□□□ -0.55
TMEM55B-205ENST00000554028 KATNAL1Q9BW62 490 aa11.59□□□□□ -0.55
TMEM55B-205ENST00000554028 TUT1Q9H6E5 874 aaKnown RBP11.59□□□□□ -0.55
TMEM55B-205ENST00000554028 C17orf75Q9HAS0 396 aa11.59□□□□□ -0.55
TMEM55B-205ENST00000554028 ATP6V0A4Q9HBG4 840 aa11.59□□□□□ -0.55
TMEM55B-205ENST00000554028 TELO2Q9Y4R8 837 aa11.59□□□□□ -0.55
TMEM55B-205ENST00000554028 PLXNA1Q9UIW2 1896 aa11.59□□□□□ -0.55
TMEM55B-205ENST00000554028 PSMA7O14818 248 aa11.58□□□□□ -0.56
TMEM55B-205ENST00000554028 GAS2O43903 313 aaKnown RBP11.58□□□□□ -0.56
TMEM55B-205ENST00000554028 HIP1RO75146 1068 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms