RNA–Protein interactions for RNA: ENST00000553779.5

ACTN1-210, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 530 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-210ENST00000553779 ATP8B4Q8TF62 1192 aa11.25□□□□□ -0.61
ACTN1-210ENST00000553779 P2RX5Q93086 422 aa11.25□□□□□ -0.61
ACTN1-210ENST00000553779 PCYT2Q99447 389 aa11.25□□□□□ -0.61
ACTN1-210ENST00000553779 ZNF577Q9BSK1 485 aa11.25□□□□□ -0.61
ACTN1-210ENST00000553779 C6orf50Q9HD87 102 aa11.25□□□□□ -0.61
ACTN1-210ENST00000553779 BARHL2Q9NY43 387 aa11.25□□□□□ -0.61
ACTN1-210ENST00000553779 PLAGL2Q9UPG8 496 aa11.25□□□□□ -0.61
ACTN1-210ENST00000553779 ARIH1Q9Y4X5 557 aaPredicted RBP11.25□□□□□ -0.61
ACTN1-210ENST00000553779 COL1A2P08123 1366 aa11.25□□□□□ -0.61
ACTN1-210ENST00000553779 CDC45O75419 566 aa11.24□□□□□ -0.61
ACTN1-210ENST00000553779 ITGB1P05556 798 aa11.24□□□□□ -0.61
ACTN1-210ENST00000553779 CA8P35219 290 aa11.24□□□□□ -0.61
ACTN1-210ENST00000553779 GTF2F1P35269 517 aaKnown RBP eCLIP11.24□□□□□ -0.61
ACTN1-210ENST00000553779 SARSP49591 514 aaKnown RBP11.24□□□□□ -0.61
ACTN1-210ENST00000553779 GATMP50440 423 aa11.24□□□□□ -0.61
ACTN1-210ENST00000553779 BMP2KLQ5H9B9 411 aa11.24□□□□□ -0.61
ACTN1-210ENST00000553779 ZNF484Q5JVG2 852 aa11.24□□□□□ -0.61
ACTN1-210ENST00000553779 MCTP2Q6DN12 878 aa11.24□□□□□ -0.61
ACTN1-210ENST00000553779 ABI1Q8IZP0 508 aa11.24□□□□□ -0.61
ACTN1-210ENST00000553779 REXO1Q8N1G1 1221 aaKnown RBP11.24□□□□□ -0.61
ACTN1-210ENST00000553779 POF1BQ8WVV4 589 aa11.24□□□□□ -0.61
ACTN1-210ENST00000553779 LINC01599Q8WXQ3 324 aa11.24□□□□□ -0.61
ACTN1-210ENST00000553779 ZNF689Q96CS4 500 aaPredicted RBP11.24□□□□□ -0.61
ACTN1-210ENST00000553779 MAP7D2Q96T17 732 aa11.24□□□□□ -0.61
ACTN1-210ENST00000553779 RC3H2Q9HBD1 1191 aaKnown RBP11.24□□□□□ -0.61
ACTN1-210ENST00000553779 C11orf16Q9NQ32 467 aa11.24□□□□□ -0.61
ACTN1-210ENST00000553779 C1orf112Q9NSG2 853 aa11.24□□□□□ -0.61
ACTN1-210ENST00000553779 AKT3Q9Y243 479 aa11.24□□□□□ -0.61
ACTN1-210ENST00000553779 FSD2A1L4K1 749 aa11.23□□□□□ -0.61
ACTN1-210ENST00000553779 IPO5O00410 1097 aaKnown RBP11.23□□□□□ -0.61
ACTN1-210ENST00000553779 MEIS1O00470 390 aa11.23□□□□□ -0.61
ACTN1-210ENST00000553779 GPR182O15218 404 aa11.23□□□□□ -0.61
ACTN1-210ENST00000553779 LINC01565O15544 149 aa11.23□□□□□ -0.61
ACTN1-210ENST00000553779 MBTPS2O43462 519 aa11.23□□□□□ -0.61
ACTN1-210ENST00000553779 TBX10O75333 385 aa11.23□□□□□ -0.61
ACTN1-210ENST00000553779 PSAPP07602 524 aa11.23□□□□□ -0.61
ACTN1-210ENST00000553779 TMOD1P28289 359 aa11.23□□□□□ -0.61
ACTN1-210ENST00000553779 SMAD2Q15796 467 aaKnown RBP11.23□□□□□ -0.61
ACTN1-210ENST00000553779 KIZQ2M2Z5 673 aa11.23□□□□□ -0.61
ACTN1-210ENST00000553779 TYW1BQ6NUM6 668 aa11.23□□□□□ -0.61
ACTN1-210ENST00000553779 SWSAP1Q6NVH7 229 aa11.23□□□□□ -0.61
ACTN1-210ENST00000553779 NIPA1Q7RTP0 329 aa11.23□□□□□ -0.61
ACTN1-210ENST00000553779 CCDC60Q8IWA6 550 aaPredicted RBP11.23□□□□□ -0.61
ACTN1-210ENST00000553779 RNF169Q8NCN4 708 aa11.23□□□□□ -0.61
ACTN1-210ENST00000553779 CCDC148Q8NFR7 591 aa11.23□□□□□ -0.61
ACTN1-210ENST00000553779 BICD2Q8TD16 824 aa11.23□□□□□ -0.61
ACTN1-210ENST00000553779 OSMRQ99650 979 aa11.23□□□□□ -0.61
ACTN1-210ENST00000553779 ADAM2Q99965 735 aa11.23□□□□□ -0.61
ACTN1-210ENST00000553779 TLE6Q9H808 572 aa11.23□□□□□ -0.61
ACTN1-210ENST00000553779 ATP6V0A4Q9HBG4 840 aa11.23□□□□□ -0.61
ACTN1-210ENST00000553779 ENTPD7Q9NQZ7 604 aa11.23□□□□□ -0.61
ACTN1-210ENST00000553779 TLR9Q9NR96 1032 aa11.23□□□□□ -0.61
ACTN1-210ENST00000553779 MUTYHQ9UIF7 546 aa11.23□□□□□ -0.61
ACTN1-210ENST00000553779 BRPF3Q9ULD4 1205 aa11.23□□□□□ -0.61
ACTN1-210ENST00000553779 CEP131Q9UPN4 1083 aa11.23□□□□□ -0.61
ACTN1-210ENST00000553779 KDM3AQ9Y4C1 1321 aa11.23□□□□□ -0.61
ACTN1-210ENST00000553779 CCNE2O96020 404 aa11.22□□□□□ -0.61
ACTN1-210ENST00000553779 VTNP04004 478 aa11.22□□□□□ -0.61
ACTN1-210ENST00000553779 GNA11P29992 359 aa11.22□□□□□ -0.61
ACTN1-210ENST00000553779 IRS1P35568 1242 aa11.22□□□□□ -0.61
ACTN1-210ENST00000553779 LTBRP36941 435 aa11.22□□□□□ -0.61
ACTN1-210ENST00000553779 DLX2Q07687 328 aaPredicted RBP11.22□□□□□ -0.61
ACTN1-210ENST00000553779 COL9A3Q14050 684 aaPredicted RBP11.22□□□□□ -0.61
ACTN1-210ENST00000553779 COL19A1Q14993 1142 aa11.22□□□□□ -0.61
ACTN1-210ENST00000553779 PFKFB3Q16875 520 aaPredicted RBP11.22□□□□□ -0.61
ACTN1-210ENST00000553779 PRR16Q569H4 304 aa11.22□□□□□ -0.61
ACTN1-210ENST00000553779 SLC24A5Q71RS6 500 aa11.22□□□□□ -0.61
ACTN1-210ENST00000553779 ADGRD2Q7Z7M1 963 aa11.22□□□□□ -0.61
ACTN1-210ENST00000553779 ZBTB33Q86T24 672 aa11.22□□□□□ -0.61
ACTN1-210ENST00000553779 SMAP1Q8IYB5 467 aaPredicted RBP11.22□□□□□ -0.61
ACTN1-210ENST00000553779 EFHBQ8N7U6 833 aa11.22□□□□□ -0.61
ACTN1-210ENST00000553779 FAM167AQ96KS9 214 aa11.22□□□□□ -0.61
ACTN1-210ENST00000553779 MFSD14AQ96MC6 490 aa11.22□□□□□ -0.61
ACTN1-210ENST00000553779 JAKMIP1Q96N16 626 aaKnown RBP11.22□□□□□ -0.61
ACTN1-210ENST00000553779 ERVK-5Q9HDB9 667 aa11.22□□□□□ -0.61
ACTN1-210ENST00000553779 TBC1D22BQ9NU19 505 aa11.22□□□□□ -0.61
ACTN1-210ENST00000553779 BARX2Q9UMQ3 279 aaPredicted RBP11.22□□□□□ -0.61
ACTN1-210ENST00000553779 ST3GAL5Q9UNP4 418 aa11.22□□□□□ -0.61
ACTN1-210ENST00000553779 NOC2LQ9Y3T9 749 aaKnown RBP11.22□□□□□ -0.61
ACTN1-210ENST00000553779 HOXA2O43364 376 aa11.21□□□□□ -0.61
ACTN1-210ENST00000553779 CHMP2AO43633 222 aa11.21□□□□□ -0.61
ACTN1-210ENST00000553779 LINC00271P0C7V0 271 aa11.21□□□□□ -0.61
ACTN1-210ENST00000553779 ZSCAN20P17040 1043 aaPredicted RBP11.21□□□□□ -0.61
ACTN1-210ENST00000553779 LAG3P18627 525 aa11.21□□□□□ -0.61
ACTN1-210ENST00000553779 DNAJB1P25685 340 aa11.21□□□□□ -0.61
ACTN1-210ENST00000553779 HOXD11P31277 338 aaPredicted RBP11.21□□□□□ -0.61
ACTN1-210ENST00000553779 CRYBB1P53674 252 aaPredicted RBP11.21□□□□□ -0.61
ACTN1-210ENST00000553779 RCAN1P53805 252 aa11.21□□□□□ -0.61
ACTN1-210ENST00000553779 UBE3AQ05086 875 aa11.21□□□□□ -0.61
ACTN1-210ENST00000553779 APOBRQ0VD83 1088 aa11.21□□□□□ -0.61
ACTN1-210ENST00000553779 CTC1Q2NKJ3 1217 aa11.21□□□□□ -0.61
ACTN1-210ENST00000553779 PLPP4Q5VZY2 271 aa11.21□□□□□ -0.61
ACTN1-210ENST00000553779 ZNF746Q6NUN9 644 aaPredicted RBP11.21□□□□□ -0.61
ACTN1-210ENST00000553779 BLOC1S2Q6QNY1 142 aa11.21□□□□□ -0.61
ACTN1-210ENST00000553779 ABHD15Q6UXT9 468 aa11.21□□□□□ -0.61
ACTN1-210ENST00000553779 Q6ZUG5 572 aa11.21□□□□□ -0.61
ACTN1-210ENST00000553779 CENPQQ7L2Z9 268 aaPredicted RBP11.21□□□□□ -0.61
ACTN1-210ENST00000553779 RTN4RL1Q86UN2 441 aaPredicted RBP11.21□□□□□ -0.61
ACTN1-210ENST00000553779 RNF135Q8IUD6 432 aa11.21□□□□□ -0.61
ACTN1-210ENST00000553779 COLGALT1Q8NBJ5 622 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms