RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 FGD2Q7Z6J4 655 aa6.01□□□□□ -1.45
SCFD1-210ENST00000553693 CALML6Q8TD86 181 aa6.01□□□□□ -1.45
SCFD1-210ENST00000553693 DLG3Q92796 817 aa6.01□□□□□ -1.45
SCFD1-210ENST00000553693 GBP4Q96PP9 640 aa6.01□□□□□ -1.45
SCFD1-210ENST00000553693 OAZ3Q9UMX2 235 aa6.01□□□□□ -1.45
SCFD1-210ENST00000553693 NR2E1Q9Y466 385 aa6.01□□□□□ -1.45
SCFD1-210ENST00000553693 MUSKO15146 869 aa6□□□□□ -1.45
SCFD1-210ENST00000553693 FSHBP01225 129 aa6□□□□□ -1.45
SCFD1-210ENST00000553693 IGFALSP35858 605 aa6□□□□□ -1.45
SCFD1-210ENST00000553693 KCNQ1P51787 676 aa6□□□□□ -1.45
SCFD1-210ENST00000553693 TMEM132BQ14DG7 1078 aa6□□□□□ -1.45
SCFD1-210ENST00000553693 ARHGAP44Q17R89 818 aa6□□□□□ -1.45
SCFD1-210ENST00000553693 TM4SF20Q53R12 229 aa6□□□□□ -1.45
SCFD1-210ENST00000553693 KANK2Q63ZY3 851 aa6□□□□□ -1.45
SCFD1-210ENST00000553693 FSTL4Q6MZW2 842 aa6□□□□□ -1.45
SCFD1-210ENST00000553693 ZNF585AQ6P3V2 769 aa6□□□□□ -1.45
SCFD1-210ENST00000553693 ABHD17CQ6PCB6 329 aa6□□□□□ -1.45
SCFD1-210ENST00000553693 LRSAM1Q6UWE0 723 aa6□□□□□ -1.45
SCFD1-210ENST00000553693 E2F7Q96AV8 911 aa6□□□□□ -1.45
SCFD1-210ENST00000553693 GNRHR2Q96P88 292 aa6□□□□□ -1.45
SCFD1-210ENST00000553693 AMNQ9BXJ7 453 aa6□□□□□ -1.45
SCFD1-210ENST00000553693 A0A0G2JNJ9 132 aa5.99□□□□□ -1.45
SCFD1-210ENST00000553693 MAFO75444 373 aaPredicted RBP5.99□□□□□ -1.45
SCFD1-210ENST00000553693 RAPGEF3O95398 923 aa5.99□□□□□ -1.45
SCFD1-210ENST00000553693 ASLP04424 464 aa5.99□□□□□ -1.45
SCFD1-210ENST00000553693 MEOX1P50221 254 aa5.99□□□□□ -1.45
SCFD1-210ENST00000553693 MAP3K12Q12852 859 aa5.99□□□□□ -1.45
SCFD1-210ENST00000553693 NFYCQ13952 458 aa5.99□□□□□ -1.45
SCFD1-210ENST00000553693 EIF4HQ15056 248 aaKnown RBP5.99□□□□□ -1.45
SCFD1-210ENST00000553693 CDSNQ15517 529 aa5.99□□□□□ -1.45
SCFD1-210ENST00000553693 TMEM200BQ69YZ2 307 aa5.99□□□□□ -1.45
SCFD1-210ENST00000553693 GRAMD4Q6IC98 578 aa5.99□□□□□ -1.45
SCFD1-210ENST00000553693 TCTN3Q6NUS6 607 aa5.99□□□□□ -1.45
SCFD1-210ENST00000553693 ZCCHC8Q6NZY4 707 aaKnown RBP5.99□□□□□ -1.45
SCFD1-210ENST00000553693 OTOP1Q7RTM1 612 aa5.99□□□□□ -1.45
SCFD1-210ENST00000553693 TAX1BP1Q86VP1 789 aa5.99□□□□□ -1.45
SCFD1-210ENST00000553693 RTKN2Q8IZC4 609 aa5.99□□□□□ -1.45
SCFD1-210ENST00000553693 UBXN4Q92575 508 aa5.99□□□□□ -1.45
SCFD1-210ENST00000553693 ZSWIM4Q9H7M6 989 aa5.99□□□□□ -1.45
SCFD1-210ENST00000553693 Q9UFV3 132 aa5.99□□□□□ -1.45
SCFD1-210ENST00000553693 ZFR2Q9UPR6 939 aaKnown RBP5.99□□□□□ -1.45
SCFD1-210ENST00000553693 PRAMEF22A3QJZ6 481 aa5.98□□□□□ -1.45
SCFD1-210ENST00000553693 ARHGAP6O43182 974 aa5.98□□□□□ -1.45
SCFD1-210ENST00000553693 KCNA6P17658 529 aa5.98□□□□□ -1.45
SCFD1-210ENST00000553693 CR2P20023 1033 aa5.98□□□□□ -1.45
SCFD1-210ENST00000553693 APEX1P27695 318 aaKnown RBP5.98□□□□□ -1.45
SCFD1-210ENST00000553693 FLT3P36888 993 aa5.98□□□□□ -1.45
SCFD1-210ENST00000553693 FNTBP49356 437 aa5.98□□□□□ -1.45
SCFD1-210ENST00000553693 CD83Q01151 205 aa5.98□□□□□ -1.45
SCFD1-210ENST00000553693 MOGSQ13724 837 aa5.98□□□□□ -1.45
SCFD1-210ENST00000553693 RNF151Q2KHN1 245 aa5.98□□□□□ -1.45
SCFD1-210ENST00000553693 CATSPEREQ5SY80 951 aa5.98□□□□□ -1.45
SCFD1-210ENST00000553693 AGBL4Q5VU57 503 aa5.98□□□□□ -1.45
SCFD1-210ENST00000553693 CC2D1AQ6P1N0 951 aaPredicted RBP5.98□□□□□ -1.45
SCFD1-210ENST00000553693 PALM2Q8IXS6 379 aa5.98□□□□□ -1.45
SCFD1-210ENST00000553693 CHST14Q8NCH0 376 aa5.98□□□□□ -1.45
SCFD1-210ENST00000553693 Q8TCH9 128 aa5.98□□□□□ -1.45
SCFD1-210ENST00000553693 SH3RF3Q8TEJ3 882 aaPredicted RBP5.98□□□□□ -1.45
SCFD1-210ENST00000553693 DRC1Q96MC2 740 aa5.98□□□□□ -1.45
SCFD1-210ENST00000553693 KIAA1683Q9H0B3 1180 aa5.98□□□□□ -1.45
SCFD1-210ENST00000553693 CABP5Q9NP86 173 aa5.98□□□□□ -1.45
SCFD1-210ENST00000553693 SAMD15Q9P1V8 674 aa5.98□□□□□ -1.45
SCFD1-210ENST00000553693 RASSF10A6NK89 507 aa5.97□□□□□ -1.45
SCFD1-210ENST00000553693 M0R2C6 588 aa5.97□□□□□ -1.45
SCFD1-210ENST00000553693 FOXS1O43638 330 aa5.97□□□□□ -1.45
SCFD1-210ENST00000553693 OPA1O60313 960 aa5.97□□□□□ -1.45
SCFD1-210ENST00000553693 RAD17O75943 681 aa5.97□□□□□ -1.45
SCFD1-210ENST00000553693 HMGA2P52926 109 aa5.97□□□□□ -1.45
SCFD1-210ENST00000553693 R3HDM1Q15032 1099 aaKnown RBP5.97□□□□□ -1.45
SCFD1-210ENST00000553693 TRIM68Q6AZZ1 485 aa5.97□□□□□ -1.45
SCFD1-210ENST00000553693 USP30Q70CQ3 517 aa5.97□□□□□ -1.45
SCFD1-210ENST00000553693 SH3TC2Q8TF17 1288 aa5.97□□□□□ -1.45
SCFD1-210ENST00000553693 WWC2-AS2Q96NR7 200 aa5.97□□□□□ -1.45
SCFD1-210ENST00000553693 FOXB1Q99853 325 aa5.97□□□□□ -1.45
SCFD1-210ENST00000553693 SCAND2PQ9GZW5 306 aaPredicted RBP5.97□□□□□ -1.45
SCFD1-210ENST00000553693 OR10A2Q9H208 303 aa5.97□□□□□ -1.45
SCFD1-210ENST00000553693 C12orf65Q9H3J6 166 aaKnown RBP5.97□□□□□ -1.45
SCFD1-210ENST00000553693 PCIF1Q9H4Z3 704 aa5.97□□□□□ -1.45
SCFD1-210ENST00000553693 PUF60Q9UHX1 559 aaKnown RBP5.97□□□□□ -1.45
SCFD1-210ENST00000553693 CDC42EP3Q9UKI2 254 aa5.97□□□□□ -1.45
SCFD1-210ENST00000553693 TESMINQ9Y4I5 508 aa5.97□□□□□ -1.45
SCFD1-210ENST00000553693 GOLGA6L22H0YM25 854 aa5.96□□□□□ -1.46
SCFD1-210ENST00000553693 CDC14BO60729 498 aa5.96□□□□□ -1.46
SCFD1-210ENST00000553693 GLRX3O76003 335 aaKnown RBP5.96□□□□□ -1.46
SCFD1-210ENST00000553693 KRT37O76014 449 aa5.96□□□□□ -1.46
SCFD1-210ENST00000553693 COMTP21964 271 aa5.96□□□□□ -1.46
SCFD1-210ENST00000553693 RPS19P39019 145 aaKnown RBP5.96□□□□□ -1.46
SCFD1-210ENST00000553693 RANGAP1P46060 587 aaPredicted RBP5.96□□□□□ -1.46
SCFD1-210ENST00000553693 MRE11P49959 708 aa5.96□□□□□ -1.46
SCFD1-210ENST00000553693 MECP2P51608 486 aaKnown RBP5.96□□□□□ -1.46
SCFD1-210ENST00000553693 ALDH6A1Q02252 535 aaKnown RBP5.96□□□□□ -1.46
SCFD1-210ENST00000553693 SQSTM1Q13501 440 aa5.96□□□□□ -1.46
SCFD1-210ENST00000553693 PCOLCEQ15113 449 aa5.96□□□□□ -1.46
SCFD1-210ENST00000553693 LARP4Q71RC2 724 aaKnown RBP eCLIP5.96□□□□□ -1.46
SCFD1-210ENST00000553693 POLNQ7Z5Q5 900 aa5.96□□□□□ -1.46
SCFD1-210ENST00000553693 FILIP1Q7Z7B0 1213 aa5.96□□□□□ -1.46
SCFD1-210ENST00000553693 SYNPOQ8N3V7 929 aa5.96□□□□□ -1.46
SCFD1-210ENST00000553693 ERCC4Q92889 916 aaPredicted RBP5.96□□□□□ -1.46
SCFD1-210ENST00000553693 ACSS2Q9NR19 701 aa5.96□□□□□ -1.46
SCFD1-210ENST00000553693 SLC30A1Q9Y6M5 507 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms