RNA–Protein interactions for RNA: ENST00000553683.1

VRK1-202, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 247 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-202ENST00000553683 APEX1P27695 318 aaKnown RBP4.82□□□□□ -1.64
VRK1-202ENST00000553683 CSF2RBP32927 897 aa4.82□□□□□ -1.64
VRK1-202ENST00000553683 KIF11P52732 1056 aa4.82□□□□□ -1.64
VRK1-202ENST00000553683 IL13RA1P78552 427 aa4.82□□□□□ -1.64
VRK1-202ENST00000553683 OCRLQ01968 901 aa4.82□□□□□ -1.64
VRK1-202ENST00000553683 ALDH6A1Q02252 535 aaKnown RBP4.82□□□□□ -1.64
VRK1-202ENST00000553683 MAP3K12Q12852 859 aa4.82□□□□□ -1.64
VRK1-202ENST00000553683 USP10Q14694 798 aaKnown RBP4.82□□□□□ -1.64
VRK1-202ENST00000553683 TMEM132BQ14DG7 1078 aa4.82□□□□□ -1.64
VRK1-202ENST00000553683 WDR72Q3MJ13 1102 aa4.82□□□□□ -1.64
VRK1-202ENST00000553683 TBC1D10BQ4KMP7 808 aaPredicted RBP4.82□□□□□ -1.64
VRK1-202ENST00000553683 ZMAT1Q5H9K5 638 aa4.82□□□□□ -1.64
VRK1-202ENST00000553683 TMEM200BQ69YZ2 307 aa4.82□□□□□ -1.64
VRK1-202ENST00000553683 RALYLQ86SE5 291 aaKnown RBP4.82□□□□□ -1.64
VRK1-202ENST00000553683 RTN4RL1Q86UN2 441 aaPredicted RBP4.82□□□□□ -1.64
VRK1-202ENST00000553683 HIPK4Q8NE63 616 aa4.82□□□□□ -1.64
VRK1-202ENST00000553683 C16orf92Q96LL3 132 aa4.82□□□□□ -1.64
VRK1-202ENST00000553683 MTFR1LQ9H019 292 aa4.82□□□□□ -1.64
VRK1-202ENST00000553683 ADAM7Q9H2U9 754 aa4.82□□□□□ -1.64
VRK1-202ENST00000553683 IFT57Q9NWB7 429 aa4.82□□□□□ -1.64
VRK1-202ENST00000553683 MAPRE3Q9UPY8 281 aa4.82□□□□□ -1.64
VRK1-202ENST00000553683 VWA7Q9Y334 891 aa4.82□□□□□ -1.64
VRK1-202ENST00000553683 A0A0G2JNJ9 132 aa4.81□□□□□ -1.64
VRK1-202ENST00000553683 PRAMEF22A3QJZ6 481 aa4.81□□□□□ -1.64
VRK1-202ENST00000553683 PMS2P1A4D2B8 440 aa4.81□□□□□ -1.64
VRK1-202ENST00000553683 DVL2O14641 736 aa4.81□□□□□ -1.64
VRK1-202ENST00000553683 GAS7O60861 476 aa4.81□□□□□ -1.64
VRK1-202ENST00000553683 DSG1Q02413 1049 aa4.81□□□□□ -1.64
VRK1-202ENST00000553683 ROM1Q03395 351 aa4.81□□□□□ -1.64
VRK1-202ENST00000553683 LRRC32Q14392 662 aa4.81□□□□□ -1.64
VRK1-202ENST00000553683 GPR158Q5T848 1215 aa4.81□□□□□ -1.64
VRK1-202ENST00000553683 SLFN13Q68D06 897 aa4.81□□□□□ -1.64
VRK1-202ENST00000553683 TRIM68Q6AZZ1 485 aa4.81□□□□□ -1.64
VRK1-202ENST00000553683 FSTL4Q6MZW2 842 aa4.81□□□□□ -1.64
VRK1-202ENST00000553683 ARHGEF18Q6ZSZ5 1173 aa4.81□□□□□ -1.64
VRK1-202ENST00000553683 PASD1Q8IV76 773 aa4.81□□□□□ -1.64
VRK1-202ENST00000553683 EFHBQ8N7U6 833 aa4.81□□□□□ -1.64
VRK1-202ENST00000553683 KIAA1958Q8N8K9 716 aa4.81□□□□□ -1.64
VRK1-202ENST00000553683 MAML3Q96JK9 1138 aa4.81□□□□□ -1.64
VRK1-202ENST00000553683 SAMD11Q96NU1 681 aa4.81□□□□□ -1.64
VRK1-202ENST00000553683 SLKQ9H2G2 1235 aaPredicted RBP4.81□□□□□ -1.64
VRK1-202ENST00000553683 UCKL1Q9NWZ5 548 aa4.81□□□□□ -1.64
VRK1-202ENST00000553683 USP36Q9P275 1121 aaKnown RBP4.81□□□□□ -1.64
VRK1-202ENST00000553683 Q9UFV3 132 aa4.81□□□□□ -1.64
VRK1-202ENST00000553683 NCANO14594 1321 aa4.8□□□□□ -1.64
VRK1-202ENST00000553683 KRTAP9-7A8MTY7 169 aa4.8□□□□□ -1.64
VRK1-202ENST00000553683 B8ZZF3 427 aa4.8□□□□□ -1.64
VRK1-202ENST00000553683 PRRG2O14669 202 aa4.8□□□□□ -1.64
VRK1-202ENST00000553683 CLSTN1O94985 981 aa4.8□□□□□ -1.64
VRK1-202ENST00000553683 PRLP01236 227 aa4.8□□□□□ -1.64
VRK1-202ENST00000553683 MC4RP32245 332 aa4.8□□□□□ -1.64
VRK1-202ENST00000553683 SCNN1BP51168 640 aa4.8□□□□□ -1.64
VRK1-202ENST00000553683 NEK4P51957 841 aa4.8□□□□□ -1.64
VRK1-202ENST00000553683 SESN2P58004 480 aaPredicted RBP4.8□□□□□ -1.64
VRK1-202ENST00000553683 PLP2Q04941 152 aa4.8□□□□□ -1.64
VRK1-202ENST00000553683 EFEMP1Q12805 493 aa4.8□□□□□ -1.64
VRK1-202ENST00000553683 NFYCQ13952 458 aa4.8□□□□□ -1.64
VRK1-202ENST00000553683 ZNF568Q3ZCX4 644 aa4.8□□□□□ -1.64
VRK1-202ENST00000553683 TTC38Q5R3I4 469 aa4.8□□□□□ -1.64
VRK1-202ENST00000553683 CREB3L3Q68CJ9 461 aa4.8□□□□□ -1.64
VRK1-202ENST00000553683 GRAMD4Q6IC98 578 aa4.8□□□□□ -1.64
VRK1-202ENST00000553683 SDE2Q6IQ49 451 aa4.8□□□□□ -1.64
VRK1-202ENST00000553683 GIMAP6Q6P9H5 292 aa4.8□□□□□ -1.64
VRK1-202ENST00000553683 FERMT3Q86UX7 667 aa4.8□□□□□ -1.64
VRK1-202ENST00000553683 LPPQ93052 612 aa4.8□□□□□ -1.64
VRK1-202ENST00000553683 SSBP3Q9BWW4 388 aaPredicted RBP4.8□□□□□ -1.64
VRK1-202ENST00000553683 ZDHHC9Q9Y397 364 aa4.8□□□□□ -1.64
VRK1-202ENST00000553683 A0A087X0B3 334 aa4.79□□□□□ -1.64
VRK1-202ENST00000553683 UBA6A0AVT1 1052 aaPredicted RBP4.79□□□□□ -1.64
VRK1-202ENST00000553683 GSG1L2A8MUP6 293 aa4.79□□□□□ -1.64
VRK1-202ENST00000553683 K7ESM1 405 aa4.79□□□□□ -1.64
VRK1-202ENST00000553683 B4GALT4O60513 344 aa4.79□□□□□ -1.64
VRK1-202ENST00000553683 ATP2A2P16615 1042 aaKnown RBP4.79□□□□□ -1.64
VRK1-202ENST00000553683 GYS2P54840 703 aa4.79□□□□□ -1.64
VRK1-202ENST00000553683 BCAR1P56945 870 aa4.79□□□□□ -1.64
VRK1-202ENST00000553683 PHC1P78364 1004 aa4.79□□□□□ -1.64
VRK1-202ENST00000553683 MOGSQ13724 837 aa4.79□□□□□ -1.64
VRK1-202ENST00000553683 SPATS1Q496A3 300 aa4.79□□□□□ -1.64
VRK1-202ENST00000553683 PHF19Q5T6S3 580 aa4.79□□□□□ -1.64
VRK1-202ENST00000553683 GLB1LQ6UWU2 654 aa4.79□□□□□ -1.64
VRK1-202ENST00000553683 DHX37Q8IY37 1157 aaKnown RBP4.79□□□□□ -1.64
VRK1-202ENST00000553683 OR2W6PQ8NHA6 318 aa4.79□□□□□ -1.64
VRK1-202ENST00000553683 BDH2Q9BUT1 245 aa4.79□□□□□ -1.64
VRK1-202ENST00000553683 TARS2Q9BW92 718 aaKnown RBP4.79□□□□□ -1.64
VRK1-202ENST00000553683 OXSMQ9NWU1 459 aa4.79□□□□□ -1.64
VRK1-202ENST00000553683 KPNA6O60684 536 aa4.78□□□□□ -1.64
VRK1-202ENST00000553683 KRT37O76014 449 aa4.78□□□□□ -1.64
VRK1-202ENST00000553683 HMGCRP04035 888 aa4.78□□□□□ -1.64
VRK1-202ENST00000553683 CD83Q01151 205 aa4.78□□□□□ -1.64
VRK1-202ENST00000553683 SART3Q15020 963 aaKnown RBP4.78□□□□□ -1.64
VRK1-202ENST00000553683 DHCR24Q15392 516 aa4.78□□□□□ -1.64
VRK1-202ENST00000553683 SKOR2Q2VWA4 1001 aaPredicted RBP4.78□□□□□ -1.64
VRK1-202ENST00000553683 TIGD7Q6NT04 549 aaPredicted RBP4.78□□□□□ -1.64
VRK1-202ENST00000553683 CNNM4Q6P4Q7 775 aa4.78□□□□□ -1.64
VRK1-202ENST00000553683 LRSAM1Q6UWE0 723 aa4.78□□□□□ -1.64
VRK1-202ENST00000553683 OTOP2Q7RTS6 562 aa4.78□□□□□ -1.64
VRK1-202ENST00000553683 BMP8AQ7Z5Y6 402 aa4.78□□□□□ -1.64
VRK1-202ENST00000553683 PHYKPLQ8IUZ5 450 aa4.78□□□□□ -1.64
VRK1-202ENST00000553683 SMC1BQ8NDV3 1235 aa4.78□□□□□ -1.64
VRK1-202ENST00000553683 ELF4Q99607 663 aaPredicted RBP4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms