RNA–Protein interactions for RNA: ENST00000553622.5

CHD8-204, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-204ENST00000553622 IGBP1P78318 339 aa10.87□□□□□ -0.67
CHD8-204ENST00000553622 CACNB1Q02641 598 aaPredicted RBP10.87□□□□□ -0.67
CHD8-204ENST00000553622 CUL4BQ13620 913 aa10.87□□□□□ -0.67
CHD8-204ENST00000553622 PLCB4Q15147 1175 aa10.87□□□□□ -0.67
CHD8-204ENST00000553622 ZSCAN23Q3MJ62 389 aa10.87□□□□□ -0.67
CHD8-204ENST00000553622 PADI6Q6TGC4 694 aa10.87□□□□□ -0.67
CHD8-204ENST00000553622 ANO5Q75V66 913 aa10.87□□□□□ -0.67
CHD8-204ENST00000553622 MAEAQ7L5Y9 396 aa10.87□□□□□ -0.67
CHD8-204ENST00000553622 PLPPR4Q7Z2D5 763 aa10.87□□□□□ -0.67
CHD8-204ENST00000553622 SYT2Q8N9I0 419 aaPredicted RBP10.87□□□□□ -0.67
CHD8-204ENST00000553622 ATP8B4Q8TF62 1192 aa10.87□□□□□ -0.67
CHD8-204ENST00000553622 PPP1R13LQ8WUF5 828 aa10.87□□□□□ -0.67
CHD8-204ENST00000553622 SMARCE1Q969G3 411 aa10.87□□□□□ -0.67
CHD8-204ENST00000553622 CCDC47Q96A33 483 aaKnown RBP10.87□□□□□ -0.67
CHD8-204ENST00000553622 VTI1AQ96AJ9 217 aa10.87□□□□□ -0.67
CHD8-204ENST00000553622 RUSC1Q9BVN2 902 aa10.87□□□□□ -0.67
CHD8-204ENST00000553622 RNF208Q9H0X6 261 aa10.87□□□□□ -0.67
CHD8-204ENST00000553622 UPF3AQ9H1J1 476 aaKnown RBP10.87□□□□□ -0.67
CHD8-204ENST00000553622 TUT1Q9H6E5 874 aaKnown RBP10.87□□□□□ -0.67
CHD8-204ENST00000553622 KBTBD4Q9NVX7 518 aa10.87□□□□□ -0.67
CHD8-204ENST00000553622 DBR1Q9UK59 544 aaKnown RBP10.87□□□□□ -0.67
CHD8-204ENST00000553622 KPNA6O60684 536 aa10.86□□□□□ -0.67
CHD8-204ENST00000553622 TBCAO75347 108 aaKnown RBP10.86□□□□□ -0.67
CHD8-204ENST00000553622 LETM1O95202 739 aaPredicted RBP10.86□□□□□ -0.67
CHD8-204ENST00000553622 XRCC6P12956 609 aaKnown RBP eCLIP10.86□□□□□ -0.67
CHD8-204ENST00000553622 CYP11B2P19099 503 aa10.86□□□□□ -0.67
CHD8-204ENST00000553622 PSEN2P49810 448 aa10.86□□□□□ -0.67
CHD8-204ENST00000553622 SLC26A2P50443 739 aa10.86□□□□□ -0.67
CHD8-204ENST00000553622 POLGP54098 1239 aaPredicted RBP10.86□□□□□ -0.67
CHD8-204ENST00000553622 MFSD10Q14728 455 aa10.86□□□□□ -0.67
CHD8-204ENST00000553622 MTFR1Q15390 333 aa10.86□□□□□ -0.67
CHD8-204ENST00000553622 KCNA10Q16322 511 aa10.86□□□□□ -0.67
CHD8-204ENST00000553622 PKN2Q16513 984 aaKnown RBP10.86□□□□□ -0.67
CHD8-204ENST00000553622 ISM2Q6H9L7 571 aa10.86□□□□□ -0.67
CHD8-204ENST00000553622 RINT1Q6NUQ1 792 aa10.86□□□□□ -0.67
CHD8-204ENST00000553622 SASS6Q6UVJ0 657 aa10.86□□□□□ -0.67
CHD8-204ENST00000553622 CXCL17Q6UXB2 119 aa10.86□□□□□ -0.67
CHD8-204ENST00000553622 RNF180Q86T96 592 aa10.86□□□□□ -0.67
CHD8-204ENST00000553622 KCTD17Q8N5Z5 321 aa10.86□□□□□ -0.67
CHD8-204ENST00000553622 BBXQ8WY36 941 aaPredicted RBP10.86□□□□□ -0.67
CHD8-204ENST00000553622 DDX12PQ92771 950 aa10.86□□□□□ -0.67
CHD8-204ENST00000553622 DEFB118Q96PH6 123 aa10.86□□□□□ -0.67
CHD8-204ENST00000553622 MTRQ99707 1265 aa10.86□□□□□ -0.67
CHD8-204ENST00000553622 C16orf70Q9BSU1 422 aa10.86□□□□□ -0.67
CHD8-204ENST00000553622 RNPEPQ9H4A4 650 aa10.86□□□□□ -0.67
CHD8-204ENST00000553622 POLD4Q9HCU8 107 aa10.86□□□□□ -0.67
CHD8-204ENST00000553622 CYP26B1Q9NR63 512 aa10.86□□□□□ -0.67
CHD8-204ENST00000553622 KIAA0100Q14667 2235 aaKnown RBP10.85□□□□□ -0.67
CHD8-204ENST00000553622 HBP1O60381 514 aa10.85□□□□□ -0.67
CHD8-204ENST00000553622 ADAMTS4O75173 837 aa10.85□□□□□ -0.67
CHD8-204ENST00000553622 FAM13AO94988 1023 aa10.85□□□□□ -0.67
CHD8-204ENST00000553622 STBD1O95210 358 aa10.85□□□□□ -0.67
CHD8-204ENST00000553622 RPN1P04843 607 aaKnown RBP10.85□□□□□ -0.67
CHD8-204ENST00000553622 HOXD8P13378 290 aaPredicted RBP10.85□□□□□ -0.67
CHD8-204ENST00000553622 PURAQ00577 322 aaKnown RBP10.85□□□□□ -0.67
CHD8-204ENST00000553622 TBC1D8BQ0IIM8 1120 aa10.85□□□□□ -0.67
CHD8-204ENST00000553622 DPYDQ12882 1025 aa10.85□□□□□ -0.67
CHD8-204ENST00000553622 PPFIA1Q13136 1202 aa10.85□□□□□ -0.67
CHD8-204ENST00000553622 KIAA0753Q2KHM9 967 aa10.85□□□□□ -0.67
CHD8-204ENST00000553622 FAM102BQ5T8I3 360 aa10.85□□□□□ -0.67
CHD8-204ENST00000553622 SH3RF1Q7Z6J0 888 aa10.85□□□□□ -0.67
CHD8-204ENST00000553622 PCSK9Q8NBP7 692 aaKnown RBP10.85□□□□□ -0.67
CHD8-204ENST00000553622 TRAPPC12Q8WVT3 735 aa10.85□□□□□ -0.67
CHD8-204ENST00000553622 C7orf25Q9BPX7 421 aa10.85□□□□□ -0.67
CHD8-204ENST00000553622 REEP2Q9BRK0 252 aa10.85□□□□□ -0.67
CHD8-204ENST00000553622 MTG1Q9BT17 334 aaPredicted RBP10.85□□□□□ -0.67
CHD8-204ENST00000553622 KATNAL1Q9BW62 490 aa10.85□□□□□ -0.67
CHD8-204ENST00000553622 NIFKQ9BYG3 293 aaKnown RBP10.85□□□□□ -0.67
CHD8-204ENST00000553622 TRIM9Q9C026 710 aa10.85□□□□□ -0.67
CHD8-204ENST00000553622 ATP6V0A4Q9HBG4 840 aa10.85□□□□□ -0.67
CHD8-204ENST00000553622 EXOC1Q9NV70 894 aa10.85□□□□□ -0.67
CHD8-204ENST00000553622 KIAA1468Q9P260 1216 aa10.85□□□□□ -0.67
CHD8-204ENST00000553622 PCDHA5Q9Y5H7 936 aa10.85□□□□□ -0.67
CHD8-204ENST00000553622 RSPH10B2B2RC85 870 aa10.84□□□□□ -0.67
CHD8-204ENST00000553622 KBTBD13C9JR72 458 aa10.84□□□□□ -0.67
CHD8-204ENST00000553622 HIP1RO75146 1068 aa10.84□□□□□ -0.67
CHD8-204ENST00000553622 F2P00734 622 aa10.84□□□□□ -0.67
CHD8-204ENST00000553622 MYL1P05976 194 aa10.84□□□□□ -0.67
CHD8-204ENST00000553622 ASGR1P07306 291 aa10.84□□□□□ -0.67
CHD8-204ENST00000553622 RSPH10BP0C881 870 aa10.84□□□□□ -0.67
CHD8-204ENST00000553622 SMIM10L2AP0DMW4 78 aa10.84□□□□□ -0.67
CHD8-204ENST00000553622 SMIM10L2BP0DMW5 78 aa10.84□□□□□ -0.67
CHD8-204ENST00000553622 INSRRP14616 1297 aa10.84□□□□□ -0.67
CHD8-204ENST00000553622 MDM2Q00987 491 aaPredicted RBP10.84□□□□□ -0.67
CHD8-204ENST00000553622 EMC2Q15006 297 aa10.84□□□□□ -0.67
CHD8-204ENST00000553622 LRRC41Q15345 812 aa10.84□□□□□ -0.67
CHD8-204ENST00000553622 ARSHQ5FYA8 562 aa10.84□□□□□ -0.67
CHD8-204ENST00000553622 FAM47CQ5HY64 1035 aa10.84□□□□□ -0.67
CHD8-204ENST00000553622 C1orf186Q6ZWK4 172 aa10.84□□□□□ -0.67
CHD8-204ENST00000553622 CCDC65Q8IXS2 484 aa10.84□□□□□ -0.67
CHD8-204ENST00000553622 ELOA2Q8IYF1 753 aaPredicted RBP10.84□□□□□ -0.67
CHD8-204ENST00000553622 METTL13Q8N6R0 699 aa10.84□□□□□ -0.67
CHD8-204ENST00000553622 ARRDC4Q8NCT1 418 aa10.84□□□□□ -0.67
CHD8-204ENST00000553622 SLC7A3Q8WY07 619 aa10.84□□□□□ -0.67
CHD8-204ENST00000553622 ANP32EQ9BTT0 268 aa10.84□□□□□ -0.67
CHD8-204ENST00000553622 SUGCTQ9HAC7 445 aa10.84□□□□□ -0.67
CHD8-204ENST00000553622 PANK4Q9NVE7 773 aa10.84□□□□□ -0.67
CHD8-204ENST00000553622 RMND1Q9NWS8 449 aa10.84□□□□□ -0.67
CHD8-204ENST00000553622 TBC1D7Q9P0N9 293 aa10.84□□□□□ -0.67
CHD8-204ENST00000553622 MAN1B1Q9UKM7 699 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms