RNA–Protein interactions for RNA: ENST00000553576.5

VIPAS39-204, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 547 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-204ENST00000553576 KCNK18Q7Z418 384 aa6.69□□□□□ -1.34
VIPAS39-204ENST00000553576 MTERF4Q7Z6M4 381 aaKnown RBP6.69□□□□□ -1.34
VIPAS39-204ENST00000553576 TMTC1Q8IUR5 882 aa6.69□□□□□ -1.34
VIPAS39-204ENST00000553576 MB21D1Q8N884 522 aa6.69□□□□□ -1.34
VIPAS39-204ENST00000553576 SYT2Q8N9I0 419 aaPredicted RBP6.69□□□□□ -1.34
VIPAS39-204ENST00000553576 PRPF38AQ8NAV1 312 aaKnown RBP6.69□□□□□ -1.34
VIPAS39-204ENST00000553576 ZNF784Q8NCA9 323 aaPredicted RBP6.69□□□□□ -1.34
VIPAS39-204ENST00000553576 KIAA0895Q8NCT3 520 aa6.69□□□□□ -1.34
VIPAS39-204ENST00000553576 ERMNQ8TAM6 284 aa6.69□□□□□ -1.34
VIPAS39-204ENST00000553576 C16orf45Q96MC5 204 aaPredicted RBP6.69□□□□□ -1.34
VIPAS39-204ENST00000553576 ERGIC2Q96RQ1 377 aa6.69□□□□□ -1.34
VIPAS39-204ENST00000553576 NUP88Q99567 741 aaPredicted RBP6.69□□□□□ -1.34
VIPAS39-204ENST00000553576 KIAA1683Q9H0B3 1180 aa6.69□□□□□ -1.34
VIPAS39-204ENST00000553576 EHMT1Q9H9B1 1298 aa6.69□□□□□ -1.34
VIPAS39-204ENST00000553576 L2HGDHQ9H9P8 463 aa6.69□□□□□ -1.34
VIPAS39-204ENST00000553576 VEZTQ9HBM0 779 aa6.69□□□□□ -1.34
VIPAS39-204ENST00000553576 TMPRSS4Q9NRS4 437 aa6.69□□□□□ -1.34
VIPAS39-204ENST00000553576 TRMT1Q9NXH9 659 aaKnown RBP6.69□□□□□ -1.34
VIPAS39-204ENST00000553576 LIMD1Q9UGP4 676 aa6.69□□□□□ -1.34
VIPAS39-204ENST00000553576 ZNF112Q9UJU3 913 aa6.69□□□□□ -1.34
VIPAS39-204ENST00000553576 PPP2R2CQ9Y2T4 447 aa6.69□□□□□ -1.34
VIPAS39-204ENST00000553576 PCDHA2Q9Y5H9 948 aa6.69□□□□□ -1.34
VIPAS39-204ENST00000553576 A0A1W2PQJ5 194 aa6.68□□□□□ -1.34
VIPAS39-204ENST00000553576 TRIM49BA6NDI0 452 aa6.68□□□□□ -1.34
VIPAS39-204ENST00000553576 FAM86B1E9PN63 330 aa6.68□□□□□ -1.34
VIPAS39-204ENST00000553576 GCOM1H8Y6P7 765 aaPredicted RBP6.68□□□□□ -1.34
VIPAS39-204ENST00000553576 MSH4O15457 936 aa6.68□□□□□ -1.34
VIPAS39-204ENST00000553576 OIP5O43482 229 aa6.68□□□□□ -1.34
VIPAS39-204ENST00000553576 RAD21O60216 631 aa6.68□□□□□ -1.34
VIPAS39-204ENST00000553576 MFAP3LO75121 409 aa6.68□□□□□ -1.34
VIPAS39-204ENST00000553576 KIF20AO95235 890 aa6.68□□□□□ -1.34
VIPAS39-204ENST00000553576 GYPCP04921 128 aa6.68□□□□□ -1.34
VIPAS39-204ENST00000553576 ICAM1P05362 532 aa6.68□□□□□ -1.34
VIPAS39-204ENST00000553576 TPM1P09493 284 aa6.68□□□□□ -1.34
VIPAS39-204ENST00000553576 FAM86B2P0C5J1 330 aa6.68□□□□□ -1.34
VIPAS39-204ENST00000553576 PLA2G4BP0C869 781 aa6.68□□□□□ -1.34
VIPAS39-204ENST00000553576 POLR2MP0CAP2 368 aa6.68□□□□□ -1.34
VIPAS39-204ENST00000553576 SPATA31C1P0DKV0 1188 aa6.68□□□□□ -1.34
VIPAS39-204ENST00000553576 PRKCSHP14314 528 aaPredicted RBP6.68□□□□□ -1.34
VIPAS39-204ENST00000553576 RHOQP17081 205 aa6.68□□□□□ -1.34
VIPAS39-204ENST00000553576 CYP11B2P19099 503 aa6.68□□□□□ -1.34
VIPAS39-204ENST00000553576 PTGIRP43119 386 aa6.68□□□□□ -1.34
VIPAS39-204ENST00000553576 HSD17B4P51659 736 aa6.68□□□□□ -1.34
VIPAS39-204ENST00000553576 IKQ13123 557 aaPredicted RBP6.68□□□□□ -1.34
VIPAS39-204ENST00000553576 PPP2R5CQ13362 524 aa6.68□□□□□ -1.34
VIPAS39-204ENST00000553576 TUSC1Q2TAM9 212 aa6.68□□□□□ -1.34
VIPAS39-204ENST00000553576 KIF4BQ2VIQ3 1234 aa6.68□□□□□ -1.34
VIPAS39-204ENST00000553576 MIIPQ5JXC2 388 aa6.68□□□□□ -1.34
VIPAS39-204ENST00000553576 FAM83BQ5T0W9 1011 aa6.68□□□□□ -1.34
VIPAS39-204ENST00000553576 B3GNT9Q6UX72 402 aa6.68□□□□□ -1.34
VIPAS39-204ENST00000553576 ZNF662Q6ZS27 426 aa6.68□□□□□ -1.34
VIPAS39-204ENST00000553576 MIGA2Q7L4E1 593 aa6.68□□□□□ -1.34
VIPAS39-204ENST00000553576 OTOP1Q7RTM1 612 aa6.68□□□□□ -1.34
VIPAS39-204ENST00000553576 PRICKLE2Q7Z3G6 844 aa6.68□□□□□ -1.34
VIPAS39-204ENST00000553576 CATSPER3Q86XQ3 398 aa6.68□□□□□ -1.34
VIPAS39-204ENST00000553576 PARP9Q8IXQ6 854 aa6.68□□□□□ -1.34
VIPAS39-204ENST00000553576 CCDC65Q8IXS2 484 aa6.68□□□□□ -1.34
VIPAS39-204ENST00000553576 ZC3H3Q8IXZ2 948 aaKnown RBP6.68□□□□□ -1.34
VIPAS39-204ENST00000553576 CSGALNACT2Q8N6G5 542 aa6.68□□□□□ -1.34
VIPAS39-204ENST00000553576 SLC5A5Q92911 643 aa6.68□□□□□ -1.34
VIPAS39-204ENST00000553576 HOOK2Q96ED9 719 aa6.68□□□□□ -1.34
VIPAS39-204ENST00000553576 MAP7D2Q96T17 732 aa6.68□□□□□ -1.34
VIPAS39-204ENST00000553576 HSD17B14Q9BPX1 270 aa6.68□□□□□ -1.34
VIPAS39-204ENST00000553576 TUBGCP2Q9BSJ2 902 aa6.68□□□□□ -1.34
VIPAS39-204ENST00000553576 WDR18Q9BV38 432 aa6.68□□□□□ -1.34
VIPAS39-204ENST00000553576 EDEM3Q9BZQ6 932 aa6.68□□□□□ -1.34
VIPAS39-204ENST00000553576 VPS16Q9H269 839 aa6.68□□□□□ -1.34
VIPAS39-204ENST00000553576 SEMA6BQ9H3T3 888 aa6.68□□□□□ -1.34
VIPAS39-204ENST00000553576 TUFT1Q9NNX1 390 aa6.68□□□□□ -1.34
VIPAS39-204ENST00000553576 SLC39A2Q9NP94 309 aa6.68□□□□□ -1.34
VIPAS39-204ENST00000553576 MAGEC2Q9UBF1 373 aaPredicted RBP6.68□□□□□ -1.34
VIPAS39-204ENST00000553576 VAV3Q9UKW4 847 aa6.68□□□□□ -1.34
VIPAS39-204ENST00000553576 CAPN11Q9UMQ6 739 aa6.68□□□□□ -1.34
VIPAS39-204ENST00000553576 KIAA1024Q9UPX6 916 aa6.68□□□□□ -1.34
VIPAS39-204ENST00000553576 DNM3Q9UQ16 869 aa6.68□□□□□ -1.34
VIPAS39-204ENST00000553576 MAPK8IP1Q9UQF2 711 aa6.68□□□□□ -1.34
VIPAS39-204ENST00000553576 PHLPP2Q6ZVD8 1323 aa6.68□□□□□ -1.34
VIPAS39-204ENST00000553576 MYH9P35579 1960 aaKnown RBP6.68□□□□□ -1.34
VIPAS39-204ENST00000553576 MEIS1O00470 390 aa6.67□□□□□ -1.34
VIPAS39-204ENST00000553576 LILRA1O75019 489 aa6.67□□□□□ -1.34
VIPAS39-204ENST00000553576 MED24O75448 989 aa6.67□□□□□ -1.34
VIPAS39-204ENST00000553576 PSMD10O75832 226 aa6.67□□□□□ -1.34
VIPAS39-204ENST00000553576 ZBTB7AO95365 584 aa6.67□□□□□ -1.34
VIPAS39-204ENST00000553576 EYA4O95677 639 aa6.67□□□□□ -1.34
VIPAS39-204ENST00000553576 GNA14O95837 355 aa6.67□□□□□ -1.34
VIPAS39-204ENST00000553576 COL8A1P27658 744 aa6.67□□□□□ -1.34
VIPAS39-204ENST00000553576 HNRNPH3P31942 346 aaKnown RBP6.67□□□□□ -1.34
VIPAS39-204ENST00000553576 CASP14P31944 242 aa6.67□□□□□ -1.34
VIPAS39-204ENST00000553576 FXR1P51114 621 aaKnown RBP eCLIP6.67□□□□□ -1.34
VIPAS39-204ENST00000553576 USP14P54578 494 aa6.67□□□□□ -1.34
VIPAS39-204ENST00000553576 SNAP25P60880 206 aa6.67□□□□□ -1.34
VIPAS39-204ENST00000553576 CDK17Q00537 523 aa6.67□□□□□ -1.34
VIPAS39-204ENST00000553576 FKBP3Q00688 224 aaKnown RBP6.67□□□□□ -1.34
VIPAS39-204ENST00000553576 UBXN1Q04323 297 aa6.67□□□□□ -1.34
VIPAS39-204ENST00000553576 COASYQ13057 564 aa6.67□□□□□ -1.34
VIPAS39-204ENST00000553576 GIT2Q14161 759 aa6.67□□□□□ -1.34
VIPAS39-204ENST00000553576 USH1GQ495M9 461 aa6.67□□□□□ -1.34
VIPAS39-204ENST00000553576 ZCWPW2Q504Y3 356 aa6.67□□□□□ -1.34
VIPAS39-204ENST00000553576 CEP55Q53EZ4 464 aa6.67□□□□□ -1.34
VIPAS39-204ENST00000553576 PRR16Q569H4 304 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms