RNA–Protein interactions for RNA: ENST00000553128.5

VPS29-211, Transcript of VPS29, retromer complex component, humanhuman

TSL 3

Gene VPS29, Length 449 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-211ENST00000553128 PDE4AP27815 886 aa14.85□□□□□ -0.03
VPS29-211ENST00000553128 KRT76Q01546 638 aa14.85□□□□□ -0.03
VPS29-211ENST00000553128 PLCB3Q01970 1234 aa14.85□□□□□ -0.03
VPS29-211ENST00000553128 PLCB4Q15147 1175 aa14.85□□□□□ -0.03
VPS29-211ENST00000553128 IMMTQ16891 758 aaKnown RBP14.85□□□□□ -0.03
VPS29-211ENST00000553128 MCTP2Q6DN12 878 aa14.85□□□□□ -0.03
VPS29-211ENST00000553128 C12orf76Q8N812 135 aaPredicted RBP14.85□□□□□ -0.03
VPS29-211ENST00000553128 FLCNQ8NFG4 579 aa14.85□□□□□ -0.03
VPS29-211ENST00000553128 IL25Q9H293 177 aa14.85□□□□□ -0.03
VPS29-211ENST00000553128 ADAM7Q9H2U9 754 aa14.85□□□□□ -0.03
VPS29-211ENST00000553128 MFSD1Q9H3U5 465 aa14.85□□□□□ -0.03
VPS29-211ENST00000553128 RGS18Q9NS28 235 aa14.85□□□□□ -0.03
VPS29-211ENST00000553128 LZTS1Q9Y250 596 aa14.85□□□□□ -0.03
VPS29-211ENST00000553128 HCFC2Q9Y5Z7 792 aa14.85□□□□□ -0.03
VPS29-211ENST00000553128 KDM3AQ9Y4C1 1321 aa14.85□□□□□ -0.03
VPS29-211ENST00000553128 KRT37O76014 449 aa14.84□□□□□ -0.03
VPS29-211ENST00000553128 NPR3P17342 541 aa14.84□□□□□ -0.03
VPS29-211ENST00000553128 CLCN5P51795 746 aa14.84□□□□□ -0.03
VPS29-211ENST00000553128 TROAPQ12815 778 aa14.84□□□□□ -0.03
VPS29-211ENST00000553128 TRAF1Q13077 416 aa14.84□□□□□ -0.03
VPS29-211ENST00000553128 XRRA1Q6P2D8 792 aa14.84□□□□□ -0.03
VPS29-211ENST00000553128 PPP1R16BQ96T49 567 aa14.84□□□□□ -0.03
VPS29-211ENST00000553128 DSCC1Q9BVC3 393 aa14.84□□□□□ -0.03
VPS29-211ENST00000553128 CNNM2Q9H8M5 875 aa14.84□□□□□ -0.03
VPS29-211ENST00000553128 RNF19AQ9NV58 838 aa14.84□□□□□ -0.03
VPS29-211ENST00000553128 ZBTB47Q9UFB7 747 aaPredicted RBP14.84□□□□□ -0.03
VPS29-211ENST00000553128 ST3GAL5Q9UNP4 418 aa14.84□□□□□ -0.03
VPS29-211ENST00000553128 SMIM35A0A1B0GVV1 85 aa14.83□□□□□ -0.04
VPS29-211ENST00000553128 DENND3A2RUS2 1198 aa14.83□□□□□ -0.04
VPS29-211ENST00000553128 PIK3CDO00329 1044 aa14.83□□□□□ -0.04
VPS29-211ENST00000553128 RPS6KA5O75582 802 aa14.83□□□□□ -0.04
VPS29-211ENST00000553128 RPLP2P05387 115 aaKnown RBP14.83□□□□□ -0.04
VPS29-211ENST00000553128 LAG3P18627 525 aa14.83□□□□□ -0.04
VPS29-211ENST00000553128 MTMR1Q13613 665 aa14.83□□□□□ -0.04
VPS29-211ENST00000553128 ANGPT1Q15389 498 aa14.83□□□□□ -0.04
VPS29-211ENST00000553128 MTHFD1LQ6UB35 978 aa14.83□□□□□ -0.04
VPS29-211ENST00000553128 SLC24A5Q71RS6 500 aa14.83□□□□□ -0.04
VPS29-211ENST00000553128 TMC7Q7Z402 723 aa14.83□□□□□ -0.04
VPS29-211ENST00000553128 CASP10Q92851 521 aa14.83□□□□□ -0.04
VPS29-211ENST00000553128 CASD1Q96PB1 797 aa14.83□□□□□ -0.04
VPS29-211ENST00000553128 LNPKQ9C0E8 428 aa14.83□□□□□ -0.04
VPS29-211ENST00000553128 NGRNQ9NPE2 291 aaKnown RBP14.83□□□□□ -0.04
VPS29-211ENST00000553128 UBIAD1Q9Y5Z9 338 aa14.83□□□□□ -0.04
VPS29-211ENST00000553128 C2orf71A6NGG8 1288 aa14.82□□□□□ -0.04
VPS29-211ENST00000553128 CLASP2O75122 1294 aaKnown RBP14.82□□□□□ -0.04
VPS29-211ENST00000553128 AOC1P19801 751 aa14.82□□□□□ -0.04
VPS29-211ENST00000553128 FAM189BP81408 668 aa14.82□□□□□ -0.04
VPS29-211ENST00000553128 ITIH3Q06033 890 aa14.82□□□□□ -0.04
VPS29-211ENST00000553128 UBE2SQ16763 222 aa14.82□□□□□ -0.04
VPS29-211ENST00000553128 TPRNQ4KMQ1 711 aa14.82□□□□□ -0.04
VPS29-211ENST00000553128 RARS2Q5T160 578 aaKnown RBP14.82□□□□□ -0.04
VPS29-211ENST00000553128 CES5AQ6NT32 575 aa14.82□□□□□ -0.04
VPS29-211ENST00000553128 KCNT2Q6UVM3 1135 aa14.82□□□□□ -0.04
VPS29-211ENST00000553128 CCDC105Q8IYK2 499 aa14.82□□□□□ -0.04
VPS29-211ENST00000553128 TDRD5Q8NAT2 981 aaKnown RBP14.82□□□□□ -0.04
VPS29-211ENST00000553128 CUL5Q93034 780 aa14.82□□□□□ -0.04
VPS29-211ENST00000553128 CDHR1Q96JP9 859 aa14.82□□□□□ -0.04
VPS29-211ENST00000553128 NECTIN4Q96NY8 510 aa14.82□□□□□ -0.04
VPS29-211ENST00000553128 C1orf112Q9NSG2 853 aa14.82□□□□□ -0.04
VPS29-211ENST00000553128 PUF60Q9UHX1 559 aaKnown RBP14.82□□□□□ -0.04
VPS29-211ENST00000553128 TAF6LQ9Y6J9 622 aa14.82□□□□□ -0.04
VPS29-211ENST00000553128 EP300Q09472 2414 aaPredicted RBP14.82□□□□□ -0.04
VPS29-211ENST00000553128 NCOR2Q9Y618 2525 aa14.81□□□□□ -0.04
VPS29-211ENST00000553128 DGLUCYQ7Z3D6 616 aa14.81□□□□□ -0.04
VPS29-211ENST00000553128 FAM228AQ86W67 206 aa14.81□□□□□ -0.04
VPS29-211ENST00000553128 KIAA2013Q8IYS2 634 aa14.81□□□□□ -0.04
VPS29-211ENST00000553128 KIAA0319LQ8IZA0 1049 aa14.81□□□□□ -0.04
VPS29-211ENST00000553128 ZDHHC14Q8IZN3 488 aa14.81□□□□□ -0.04
VPS29-211ENST00000553128 NME8Q8N427 588 aa14.81□□□□□ -0.04
VPS29-211ENST00000553128 MRPL43Q8N983 215 aaKnown RBP14.81□□□□□ -0.04
VPS29-211ENST00000553128 AZI2Q9H6S1 392 aa14.81□□□□□ -0.04
VPS29-211ENST00000553128 ATP6V0A4Q9HBG4 840 aa14.81□□□□□ -0.04
VPS29-211ENST00000553128 JPH1Q9HDC5 661 aaPredicted RBP14.81□□□□□ -0.04
VPS29-211ENST00000553128 JADE2Q9NQC1 790 aa14.81□□□□□ -0.04
VPS29-211ENST00000553128 TMEM161AQ9NX61 479 aa14.81□□□□□ -0.04
VPS29-211ENST00000553128 SLC9A2Q9UBY0 812 aa14.81□□□□□ -0.04
VPS29-211ENST00000553128 IFIT3O14879 490 aaKnown RBP14.8□□□□□ -0.04
VPS29-211ENST00000553128 KLRC1P26715 233 aa14.8□□□□□ -0.04
VPS29-211ENST00000553128 MTHFRP42898 656 aa14.8□□□□□ -0.04
VPS29-211ENST00000553128 ACTR2P61160 394 aa14.8□□□□□ -0.04
VPS29-211ENST00000553128 DSC3Q14574 896 aa14.8□□□□□ -0.04
VPS29-211ENST00000553128 DTWD2Q8NBA8 298 aa14.8□□□□□ -0.04
VPS29-211ENST00000553128 CYP2W1Q8TAV3 490 aa14.8□□□□□ -0.04
VPS29-211ENST00000553128 ZNF558Q96NG5 402 aa14.8□□□□□ -0.04
VPS29-211ENST00000553128 OSMRQ99650 979 aa14.8□□□□□ -0.04
VPS29-211ENST00000553128 MYL10Q9BUA6 226 aa14.8□□□□□ -0.04
VPS29-211ENST00000553128 TMEM117Q9H0C3 514 aa14.8□□□□□ -0.04
VPS29-211ENST00000553128 DIAPH3Q9NSV4 1193 aa14.8□□□□□ -0.04
VPS29-211ENST00000553128 EOMESO95936 686 aa14.79□□□□□ -0.04
VPS29-211ENST00000553128 EPCAMP16422 314 aa14.79□□□□□ -0.04
VPS29-211ENST00000553128 STAT5BP51692 787 aa14.79□□□□□ -0.04
VPS29-211ENST00000553128 SMC1AQ14683 1233 aaKnown RBP14.79□□□□□ -0.04
VPS29-211ENST00000553128 KIZQ2M2Z5 673 aa14.79□□□□□ -0.04
VPS29-211ENST00000553128 KIAA1841Q6NSI8 718 aa14.79□□□□□ -0.04
VPS29-211ENST00000553128 PLPPR4Q7Z2D5 763 aa14.79□□□□□ -0.04
VPS29-211ENST00000553128 KCNG4Q8TDN1 519 aa14.79□□□□□ -0.04
VPS29-211ENST00000553128 AUTS2Q8WXX7 1259 aa14.79□□□□□ -0.04
VPS29-211ENST00000553128 KCNH7Q9NS40 1196 aa14.79□□□□□ -0.04
VPS29-211ENST00000553128 SPG21Q9NZD8 308 aa14.79□□□□□ -0.04
VPS29-211ENST00000553128 DBR1Q9UK59 544 aaKnown RBP14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms