RNA–Protein interactions for RNA: ENST00000552422.5

CNOT2-238, Transcript of CCR4-NOT transcription complex subunit 2, human

TSL 3

Gene CNOT2, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT2-238	ENST00000552422	PRPF38A	Q8NAV1	312 aa	Known RBP	7.77	□□□□□ -1.17
CNOT2-238	ENST00000552422	REPS2	Q8NFH8	660 aa		7.77	□□□□□ -1.17
CNOT2-238	ENST00000552422	DCAF4	Q8WV16	495 aa		7.77	□□□□□ -1.17
CNOT2-238	ENST00000552422	MCOLN1	Q9GZU1	580 aa		7.77	□□□□□ -1.17
CNOT2-238	ENST00000552422	SPATC1L	Q9H0A9	340 aa		7.77	□□□□□ -1.17
CNOT2-238	ENST00000552422	RNF208	Q9H0X6	261 aa		7.77	□□□□□ -1.17
CNOT2-238	ENST00000552422	PORCN	Q9H237	461 aa		7.77	□□□□□ -1.17
CNOT2-238	ENST00000552422	STOML1	Q9UBI4	398 aa		7.77	□□□□□ -1.17
CNOT2-238	ENST00000552422	SRRD	Q9UH36	339 aa		7.77	□□□□□ -1.17
CNOT2-238	ENST00000552422	FEM1B	Q9UK73	627 aa		7.77	□□□□□ -1.17
CNOT2-238	ENST00000552422	ZNF214	Q9UL59	606 aa	Predicted RBP	7.77	□□□□□ -1.17
CNOT2-238	ENST00000552422	PTPN22	Q9Y2R2	807 aa		7.77	□□□□□ -1.17
CNOT2-238	ENST00000552422	CEP290	O15078	2479 aa		7.76	□□□□□ -1.17
CNOT2-238	ENST00000552422	METTL12	A8MUP2	240 aa		7.76	□□□□□ -1.17
CNOT2-238	ENST00000552422	TMEM232	C9JQI7	657 aa		7.76	□□□□□ -1.17
CNOT2-238	ENST00000552422	ATP2A1	O14983	1001 aa		7.76	□□□□□ -1.17
CNOT2-238	ENST00000552422	ZKSCAN1	P17029	563 aa	Predicted RBP	7.76	□□□□□ -1.17
CNOT2-238	ENST00000552422	MAPK4	P31152	587 aa		7.76	□□□□□ -1.17
CNOT2-238	ENST00000552422	MCM5	P33992	734 aa		7.76	□□□□□ -1.17
CNOT2-238	ENST00000552422	HSPA4	P34932	840 aa		7.76	□□□□□ -1.17
CNOT2-238	ENST00000552422	PRMT2	P55345	433 aa		7.76	□□□□□ -1.17
CNOT2-238	ENST00000552422	ZNF543	Q08ER8	600 aa		7.76	□□□□□ -1.17
CNOT2-238	ENST00000552422	LRP8	Q14114	963 aa		7.76	□□□□□ -1.17
CNOT2-238	ENST00000552422	TMEM132B	Q14DG7	1078 aa		7.76	□□□□□ -1.17
CNOT2-238	ENST00000552422	SART3	Q15020	963 aa	Known RBP	7.76	□□□□□ -1.17
CNOT2-238	ENST00000552422	IFIT1B	Q5T764	474 aa	Known RBP	7.76	□□□□□ -1.17
CNOT2-238	ENST00000552422	ANKRD34A	Q69YU3	496 aa		7.76	□□□□□ -1.17
CNOT2-238	ENST00000552422	FDX2	Q6P4F2	183 aa		7.76	□□□□□ -1.17
CNOT2-238	ENST00000552422	KCTD1	Q719H9	257 aa		7.76	□□□□□ -1.17
CNOT2-238	ENST00000552422	GALNT12	Q8IXK2	581 aa		7.76	□□□□□ -1.17
CNOT2-238	ENST00000552422	ARMC10	Q8N2F6	343 aa		7.76	□□□□□ -1.17
CNOT2-238	ENST00000552422	SHCBP1	Q8NEM2	672 aa		7.76	□□□□□ -1.17
CNOT2-238	ENST00000552422	CHURC1	Q8WUH1	139 aa		7.76	□□□□□ -1.17
CNOT2-238	ENST00000552422	KCNB2	Q92953	911 aa		7.76	□□□□□ -1.17
CNOT2-238	ENST00000552422	COA7	Q96BR5	231 aa		7.76	□□□□□ -1.17
CNOT2-238	ENST00000552422	FAM46A	Q96IP4	442 aa	Known RBP	7.76	□□□□□ -1.17
CNOT2-238	ENST00000552422	MTA3	Q9BTC8	594 aa		7.76	□□□□□ -1.17
CNOT2-238	ENST00000552422	USP26	Q9BXU7	913 aa		7.76	□□□□□ -1.17
CNOT2-238	ENST00000552422	SLC38A10	Q9HBR0	1119 aa		7.76	□□□□□ -1.17
CNOT2-238	ENST00000552422	WDR19	Q8NEZ3	1342 aa		7.76	□□□□□ -1.17
CNOT2-238	ENST00000552422	ERICH2	A1L162	156 aa		7.75	□□□□□ -1.17
CNOT2-238	ENST00000552422	IFIT3	O14879	490 aa	Known RBP	7.75	□□□□□ -1.17
CNOT2-238	ENST00000552422	HOXD10	P28358	340 aa		7.75	□□□□□ -1.17
CNOT2-238	ENST00000552422	FLT3LG	P49771	235 aa		7.75	□□□□□ -1.17
CNOT2-238	ENST00000552422	OAZ1	P54368	228 aa		7.75	□□□□□ -1.17
CNOT2-238	ENST00000552422	PRKCZ	Q05513	592 aa		7.75	□□□□□ -1.17
CNOT2-238	ENST00000552422	KRT32	Q14532	448 aa		7.75	□□□□□ -1.17
CNOT2-238	ENST00000552422	PLS1	Q14651	629 aa		7.75	□□□□□ -1.17
CNOT2-238	ENST00000552422	CCDC96	Q2M329	555 aa		7.75	□□□□□ -1.17
CNOT2-238	ENST00000552422	ADCK5	Q3MIX3	580 aa		7.75	□□□□□ -1.17
CNOT2-238	ENST00000552422	GPATCH4	Q5T3I0	446 aa	Known RBP	7.75	□□□□□ -1.17
CNOT2-238	ENST00000552422	BTNL9	Q6UXG8	535 aa		7.75	□□□□□ -1.17
CNOT2-238	ENST00000552422	CHST3	Q7LGC8	479 aa		7.75	□□□□□ -1.17
CNOT2-238	ENST00000552422	GPR142	Q7Z601	462 aa		7.75	□□□□□ -1.17
CNOT2-238	ENST00000552422	FAM160B2	Q86V87	743 aa		7.75	□□□□□ -1.17
CNOT2-238	ENST00000552422	RIOX2	Q8IUF8	465 aa		7.75	□□□□□ -1.17
CNOT2-238	ENST00000552422	IGDCC4	Q8TDY8	1250 aa		7.75	□□□□□ -1.17
CNOT2-238	ENST00000552422	SOCS4	Q8WXH5	440 aa		7.75	□□□□□ -1.17
CNOT2-238	ENST00000552422	TMEM87B	Q96K49	555 aa		7.75	□□□□□ -1.17
CNOT2-238	ENST00000552422	MYRFL	Q96LU7	910 aa		7.75	□□□□□ -1.17
CNOT2-238	ENST00000552422	MOV10L1	Q9BXT6	1211 aa	Known RBP	7.75	□□□□□ -1.17
CNOT2-238	ENST00000552422	TEX13B	Q9BXU2	312 aa		7.75	□□□□□ -1.17
CNOT2-238	ENST00000552422	KAT14	Q9H8E8	782 aa		7.75	□□□□□ -1.17
CNOT2-238	ENST00000552422	LIN7B	Q9HAP6	207 aa		7.75	□□□□□ -1.17
CNOT2-238	ENST00000552422	LY9	Q9HBG7	655 aa		7.75	□□□□□ -1.17
CNOT2-238	ENST00000552422	GJD2	Q9UKL4	321 aa		7.75	□□□□□ -1.17
CNOT2-238	ENST00000552422	RNF112	Q9ULX5	631 aa		7.75	□□□□□ -1.17
CNOT2-238	ENST00000552422	PTCH2	Q9Y6C5	1203 aa		7.75	□□□□□ -1.17
CNOT2-238	ENST00000552422	MYH7B	A7E2Y1	1941 aa		7.74	□□□□□ -1.17
CNOT2-238	ENST00000552422		A0A1W2PP55	124 aa		7.74	□□□□□ -1.17
CNOT2-238	ENST00000552422	GSC2	O15499	205 aa		7.74	□□□□□ -1.17
CNOT2-238	ENST00000552422	PRC1	O43663	620 aa		7.74	□□□□□ -1.17
CNOT2-238	ENST00000552422	SLC25A27	O95847	323 aa		7.74	□□□□□ -1.17
CNOT2-238	ENST00000552422	ESRRA	P11474	423 aa	Predicted RBP	7.74	□□□□□ -1.17
CNOT2-238	ENST00000552422	ERCC3	P19447	782 aa		7.74	□□□□□ -1.17
CNOT2-238	ENST00000552422	TROAP	Q12815	778 aa		7.74	□□□□□ -1.17
CNOT2-238	ENST00000552422	IK	Q13123	557 aa	Predicted RBP	7.74	□□□□□ -1.17
CNOT2-238	ENST00000552422	GRB14	Q14449	540 aa		7.74	□□□□□ -1.17
CNOT2-238	ENST00000552422	WTAP	Q15007	396 aa		7.74	□□□□□ -1.17
CNOT2-238	ENST00000552422	SLC9C1	Q4G0N8	1177 aa		7.74	□□□□□ -1.17
CNOT2-238	ENST00000552422	ASPRV1	Q53RT3	343 aa		7.74	□□□□□ -1.17
CNOT2-238	ENST00000552422	TMEM67	Q5HYA8	995 aa		7.74	□□□□□ -1.17
CNOT2-238	ENST00000552422	SNRNP48	Q6IEG0	339 aa	Known RBP	7.74	□□□□□ -1.17
CNOT2-238	ENST00000552422	TTBK2	Q6IQ55	1244 aa		7.74	□□□□□ -1.17
CNOT2-238	ENST00000552422	PLEKHH3	Q7Z736	793 aa		7.74	□□□□□ -1.17
CNOT2-238	ENST00000552422	NBPF11	Q86T75	865 aa		7.74	□□□□□ -1.17
CNOT2-238	ENST00000552422	CCAR1	Q8IX12	1150 aa	Known RBP	7.74	□□□□□ -1.17
CNOT2-238	ENST00000552422	USP6NL	Q92738	828 aa		7.74	□□□□□ -1.17
CNOT2-238	ENST00000552422	CHMP4C	Q96CF2	233 aa		7.74	□□□□□ -1.17
CNOT2-238	ENST00000552422	ABHD8	Q96I13	439 aa		7.74	□□□□□ -1.17
CNOT2-238	ENST00000552422	NEK1	Q96PY6	1258 aa		7.74	□□□□□ -1.17
CNOT2-238	ENST00000552422	CITED4	Q96RK1	184 aa		7.74	□□□□□ -1.17
CNOT2-238	ENST00000552422	MROH8	Q9H579	483 aa		7.74	□□□□□ -1.17
CNOT2-238	ENST00000552422	SOX17	Q9H6I2	414 aa	Predicted RBP	7.74	□□□□□ -1.17
CNOT2-238	ENST00000552422	ISY1	Q9ULR0	285 aa	Known RBP	7.74	□□□□□ -1.17
CNOT2-238	ENST00000552422	GABRQ	Q9UN88	632 aa		7.74	□□□□□ -1.17
CNOT2-238	ENST00000552422	SNX14	Q9Y5W7	946 aa		7.74	□□□□□ -1.17
CNOT2-238	ENST00000552422	ZNF536	O15090	1300 aa		7.74	□□□□□ -1.17
CNOT2-238	ENST00000552422	FRMPD2	Q68DX3	1309 aa	Predicted RBP	7.74	□□□□□ -1.17
CNOT2-238	ENST00000552422	ALPK3	Q96L96	1907 aa		7.74	□□□□□ -1.17

Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms