RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 NME8Q8N427 588 aa20.72■□□□□ 0.91
PRPF40B-216ENST00000552301 SEPT8Q92599 483 aa20.72■□□□□ 0.91
PRPF40B-216ENST00000552301 LRCH3Q96II8 777 aa20.72■□□□□ 0.91
PRPF40B-216ENST00000552301 MAP7D2Q96T17 732 aa20.72■□□□□ 0.91
PRPF40B-216ENST00000552301 CXXC1Q9P0U4 656 aaPredicted RBP20.72■□□□□ 0.91
PRPF40B-216ENST00000552301 TRPV2Q9Y5S1 764 aa20.72■□□□□ 0.91
PRPF40B-216ENST00000552301 CDY2AQ9Y6F7 541 aa20.72■□□□□ 0.91
PRPF40B-216ENST00000552301 EFCAB14O75071 495 aa20.71■□□□□ 0.91
PRPF40B-216ENST00000552301 TMOD1P28289 359 aa20.71■□□□□ 0.91
PRPF40B-216ENST00000552301 SMAD3P84022 425 aaKnown RBP20.71■□□□□ 0.91
PRPF40B-216ENST00000552301 ERMNQ8TAM6 284 aa20.71■□□□□ 0.91
PRPF40B-216ENST00000552301 VWCEQ96DN2 955 aa20.71■□□□□ 0.91
PRPF40B-216ENST00000552301 DYDC2Q96IM9 177 aa20.71■□□□□ 0.91
PRPF40B-216ENST00000552301 ZSWIM4Q9H7M6 989 aa20.71■□□□□ 0.91
PRPF40B-216ENST00000552301 RGL1Q9NZL6 768 aa20.71■□□□□ 0.91
PRPF40B-216ENST00000552301 PCDHB6Q9Y5E3 794 aa20.71■□□□□ 0.91
PRPF40B-216ENST00000552301 POTEMA6NI47 508 aa20.7■□□□□ 0.9
PRPF40B-216ENST00000552301 CHRNA1P02708 482 aa20.7■□□□□ 0.9
PRPF40B-216ENST00000552301 GHRP10912 638 aa20.7■□□□□ 0.9
PRPF40B-216ENST00000552301 TOB1P50616 345 aaPredicted RBP20.7■□□□□ 0.9
PRPF40B-216ENST00000552301 TMEM62Q0P6H9 643 aa20.7■□□□□ 0.9
PRPF40B-216ENST00000552301 IKBKEQ14164 716 aa20.7■□□□□ 0.9
PRPF40B-216ENST00000552301 CTTNQ14247 550 aaKnown RBP20.7■□□□□ 0.9
PRPF40B-216ENST00000552301 GPNMBQ14956 572 aa20.7■□□□□ 0.9
PRPF40B-216ENST00000552301 BRAPQ7Z569 592 aa20.7■□□□□ 0.9
PRPF40B-216ENST00000552301 TPH2Q8IWU9 490 aa20.7■□□□□ 0.9
PRPF40B-216ENST00000552301 C4orf19Q8IY42 314 aa20.7■□□□□ 0.9
PRPF40B-216ENST00000552301 CCDC43Q96MW1 224 aaKnown RBP20.7■□□□□ 0.9
PRPF40B-216ENST00000552301 EIF2AK1Q9BQI3 630 aaKnown RBP20.7■□□□□ 0.9
PRPF40B-216ENST00000552301 NIFKQ9BYG3 293 aaKnown RBP20.7■□□□□ 0.9
PRPF40B-216ENST00000552301 GINS2Q9Y248 185 aa20.7■□□□□ 0.9
PRPF40B-216ENST00000552301 EVPLQ92817 2033 aa20.7■□□□□ 0.9
PRPF40B-216ENST00000552301 ABHD14A-ACY1A0A1B0GW23 586 aa20.69■□□□□ 0.9
PRPF40B-216ENST00000552301 LAD1O00515 517 aa20.69■□□□□ 0.9
PRPF40B-216ENST00000552301 TECP42680 631 aa20.69■□□□□ 0.9
PRPF40B-216ENST00000552301 CLCN3P51790 818 aa20.69■□□□□ 0.9
PRPF40B-216ENST00000552301 MGAT3Q09327 533 aa20.69■□□□□ 0.9
PRPF40B-216ENST00000552301 PTGDRQ13258 359 aa20.69■□□□□ 0.9
PRPF40B-216ENST00000552301 PLA2G4FQ68DD2 849 aa20.69■□□□□ 0.9
PRPF40B-216ENST00000552301 EFCAB12Q6NXP0 572 aa20.69■□□□□ 0.9
PRPF40B-216ENST00000552301 OTUD6AQ7L8S5 288 aa20.69■□□□□ 0.9
PRPF40B-216ENST00000552301 DBF4BQ8NFT6 615 aa20.69■□□□□ 0.9
PRPF40B-216ENST00000552301 APBB2Q92870 758 aa20.69■□□□□ 0.9
PRPF40B-216ENST00000552301 SLC9A7Q96T83 725 aa20.69■□□□□ 0.9
PRPF40B-216ENST00000552301 JPH2Q9BR39 696 aaPredicted RBP20.69■□□□□ 0.9
PRPF40B-216ENST00000552301 IFIH1Q9BYX4 1025 aaKnown RBP20.69■□□□□ 0.9
PRPF40B-216ENST00000552301 RAB34Q9BZG1 259 aa20.69■□□□□ 0.9
PRPF40B-216ENST00000552301 SUGCTQ9HAC7 445 aa20.69■□□□□ 0.9
PRPF40B-216ENST00000552301 AKT3Q9Y243 479 aa20.69■□□□□ 0.9
PRPF40B-216ENST00000552301 TMEM150BA6NC51 233 aa20.68■□□□□ 0.9
PRPF40B-216ENST00000552301 ATP2A2P16615 1042 aaKnown RBP20.68■□□□□ 0.9
PRPF40B-216ENST00000552301 YWHABP31946 246 aaKnown RBP20.68■□□□□ 0.9
PRPF40B-216ENST00000552301 PLEKHG4Q58EX7 1191 aa20.68■□□□□ 0.9
PRPF40B-216ENST00000552301 FERMT3Q86UX7 667 aa20.68■□□□□ 0.9
PRPF40B-216ENST00000552301 KIAA0319LQ8IZA0 1049 aa20.68■□□□□ 0.9
PRPF40B-216ENST00000552301 LRRC71Q8N4P6 559 aa20.68■□□□□ 0.9
PRPF40B-216ENST00000552301 CEP170P1Q96L14 293 aa20.68■□□□□ 0.9
PRPF40B-216ENST00000552301 CELF4Q9BZC1 486 aaKnown RBP20.68■□□□□ 0.9
PRPF40B-216ENST00000552301 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.68■□□□□ 0.9
PRPF40B-216ENST00000552301 PPME1Q9Y570 386 aa20.68■□□□□ 0.9
PRPF40B-216ENST00000552301 STBD1O95210 358 aa20.67■□□□□ 0.9
PRPF40B-216ENST00000552301 SYT1P21579 422 aa20.67■□□□□ 0.9
PRPF40B-216ENST00000552301 DNM2P50570 870 aa20.67■□□□□ 0.9
PRPF40B-216ENST00000552301 TARBP2Q15633 366 aaKnown RBP20.67■□□□□ 0.9
PRPF40B-216ENST00000552301 FBXO47Q5MNV8 452 aa20.67■□□□□ 0.9
PRPF40B-216ENST00000552301 HAUS3Q68CZ6 603 aa20.67■□□□□ 0.9
PRPF40B-216ENST00000552301 FAM109BQ6ICB4 259 aaPredicted RBP20.67■□□□□ 0.9
PRPF40B-216ENST00000552301 GPR153Q6NV75 609 aa20.67■□□□□ 0.9
PRPF40B-216ENST00000552301 TSHZ1Q6ZSZ6 1077 aa20.67■□□□□ 0.9
PRPF40B-216ENST00000552301 ANO5Q75V66 913 aa20.67■□□□□ 0.9
PRPF40B-216ENST00000552301 USP38Q8NB14 1042 aa20.67■□□□□ 0.9
PRPF40B-216ENST00000552301 SCLT1Q96NL6 688 aa20.67■□□□□ 0.9
PRPF40B-216ENST00000552301 PPP1R16BQ96T49 567 aa20.67■□□□□ 0.9
PRPF40B-216ENST00000552301 SH2D3AQ9BRG2 576 aa20.67■□□□□ 0.9
PRPF40B-216ENST00000552301 CYP26B1Q9NR63 512 aa20.67■□□□□ 0.9
PRPF40B-216ENST00000552301 MSRAQ9UJ68 235 aa20.67■□□□□ 0.9
PRPF40B-216ENST00000552301 GRXCR1A8MXD5 290 aa20.66■□□□□ 0.9
PRPF40B-216ENST00000552301 SLITRK3O94933 977 aa20.66■□□□□ 0.9
PRPF40B-216ENST00000552301 VTNP04004 478 aa20.66■□□□□ 0.9
PRPF40B-216ENST00000552301 POLGP54098 1239 aaPredicted RBP20.66■□□□□ 0.9
PRPF40B-216ENST00000552301 WDR5P61964 334 aaKnown RBP20.66■□□□□ 0.9
PRPF40B-216ENST00000552301 LPIN1Q14693 890 aa20.66■□□□□ 0.9
PRPF40B-216ENST00000552301 RAB30Q15771 203 aa20.66■□□□□ 0.9
PRPF40B-216ENST00000552301 XKR9Q5GH70 373 aa20.66■□□□□ 0.9
PRPF40B-216ENST00000552301 ZNF697Q5TEC3 545 aa20.66■□□□□ 0.9
PRPF40B-216ENST00000552301 EXOC8Q8IYI6 725 aa20.66■□□□□ 0.9
PRPF40B-216ENST00000552301 ZNF710Q8N1W2 664 aa20.66■□□□□ 0.9
PRPF40B-216ENST00000552301 PHOSPHO2Q8TCD6 241 aa20.66■□□□□ 0.9
PRPF40B-216ENST00000552301 SLC7A3Q8WY07 619 aa20.66■□□□□ 0.9
PRPF40B-216ENST00000552301 HSD17B14Q9BPX1 270 aa20.66■□□□□ 0.9
PRPF40B-216ENST00000552301 WRAP73Q9P2S5 460 aaPredicted RBP20.66■□□□□ 0.9
PRPF40B-216ENST00000552301 SQORQ9Y6N5 450 aa20.66■□□□□ 0.9
PRPF40B-216ENST00000552301 KDM3AQ9Y4C1 1321 aa20.66■□□□□ 0.9
PRPF40B-216ENST00000552301 LYPLA2O95372 231 aa20.65■□□□□ 0.9
PRPF40B-216ENST00000552301 BMP15O95972 392 aa20.65■□□□□ 0.9
PRPF40B-216ENST00000552301 DNAJB2P25686 324 aa20.65■□□□□ 0.9
PRPF40B-216ENST00000552301 RFC5P40937 340 aa20.65■□□□□ 0.9
PRPF40B-216ENST00000552301 PRPHP41219 470 aa20.65■□□□□ 0.9
PRPF40B-216ENST00000552301 FXR2P51116 673 aaKnown RBP eCLIP20.65■□□□□ 0.9
PRPF40B-216ENST00000552301 NPEPPSP55786 919 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms