RNA–Protein interactions for RNA: ENST00000552089.5

RBFOX1-214, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5 BASIC

Gene RBFOX1, Length 1,430 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-214ENST00000552089 HOOK1Q9UJC3 728 aaKnown RBP13.56□□□□□ -0.24
RBFOX1-214ENST00000552089 MTMR7Q9Y216 660 aa13.56□□□□□ -0.24
RBFOX1-214ENST00000552089 RWDD3Q9Y3V2 267 aa13.56□□□□□ -0.24
RBFOX1-214ENST00000552089 SPTLC2O15270 562 aa13.56□□□□□ -0.24
RBFOX1-214ENST00000552089 TPM3P06753 285 aa13.56□□□□□ -0.24
RBFOX1-214ENST00000552089 LINC00271P0C7V0 271 aa13.56□□□□□ -0.24
RBFOX1-214ENST00000552089 ME1P48163 572 aa13.56□□□□□ -0.24
RBFOX1-214ENST00000552089 NOVP48745 357 aa13.56□□□□□ -0.24
RBFOX1-214ENST00000552089 CAMK1Q14012 370 aa13.56□□□□□ -0.24
RBFOX1-214ENST00000552089 STK38Q15208 465 aa13.56□□□□□ -0.24
RBFOX1-214ENST00000552089 FOXD4L6Q3SYB3 417 aaPredicted RBP13.56□□□□□ -0.24
RBFOX1-214ENST00000552089 RCSD1Q6JBY9 416 aa13.56□□□□□ -0.24
RBFOX1-214ENST00000552089 FOXD4L3Q6VB84 417 aaPredicted RBP13.56□□□□□ -0.24
RBFOX1-214ENST00000552089 SESTD1Q86VW0 696 aa13.56□□□□□ -0.24
RBFOX1-214ENST00000552089 DTWD2Q8NBA8 298 aa13.56□□□□□ -0.24
RBFOX1-214ENST00000552089 NAT10Q9H0A0 1025 aaKnown RBP13.56□□□□□ -0.24
RBFOX1-214ENST00000552089 EMSYQ7Z589 1322 aa13.55□□□□□ -0.24
RBFOX1-214ENST00000552089 FAM237AA0A1B0GTK4 181 aa13.55□□□□□ -0.24
RBFOX1-214ENST00000552089 A6NJR5 290 aa13.55□□□□□ -0.24
RBFOX1-214ENST00000552089 CALML3P27482 149 aa13.55□□□□□ -0.24
RBFOX1-214ENST00000552089 CDC27P30260 824 aa13.55□□□□□ -0.24
RBFOX1-214ENST00000552089 TRAPPC10P48553 1259 aa13.55□□□□□ -0.24
RBFOX1-214ENST00000552089 TRIM71Q2Q1W2 868 aaKnown RBP13.55□□□□□ -0.24
RBFOX1-214ENST00000552089 SLFN13Q68D06 897 aa13.55□□□□□ -0.24
RBFOX1-214ENST00000552089 SASS6Q6UVJ0 657 aa13.55□□□□□ -0.24
RBFOX1-214ENST00000552089 RBM23Q86U06 439 aaKnown RBP13.55□□□□□ -0.24
RBFOX1-214ENST00000552089 NOSTRINQ8IVI9 506 aa13.55□□□□□ -0.24
RBFOX1-214ENST00000552089 ZNF579Q8NAF0 562 aaKnown RBP13.55□□□□□ -0.24
RBFOX1-214ENST00000552089 GMCL1P1Q8NEA9 526 aa13.55□□□□□ -0.24
RBFOX1-214ENST00000552089 MORC4Q8TE76 937 aa13.55□□□□□ -0.24
RBFOX1-214ENST00000552089 MRPS27Q92552 414 aaKnown RBP13.55□□□□□ -0.24
RBFOX1-214ENST00000552089 USP28Q96RU2 1077 aa13.55□□□□□ -0.24
RBFOX1-214ENST00000552089 TMEM47Q9BQJ4 181 aa13.55□□□□□ -0.24
RBFOX1-214ENST00000552089 PYM1Q9BRP8 204 aaKnown RBP13.55□□□□□ -0.24
RBFOX1-214ENST00000552089 FUCA2Q9BTY2 467 aa13.55□□□□□ -0.24
RBFOX1-214ENST00000552089 RBSNQ9H1K0 784 aa13.55□□□□□ -0.24
RBFOX1-214ENST00000552089 DACT1Q9NYF0 836 aa13.55□□□□□ -0.24
RBFOX1-214ENST00000552089 DCDC2BA2VCK2 349 aa13.54□□□□□ -0.24
RBFOX1-214ENST00000552089 PI15O43692 258 aa13.54□□□□□ -0.24
RBFOX1-214ENST00000552089 ARP10275 920 aa13.54□□□□□ -0.24
RBFOX1-214ENST00000552089 AOC1P19801 751 aa13.54□□□□□ -0.24
RBFOX1-214ENST00000552089 FAM200AQ8TCP9 573 aa13.54□□□□□ -0.24
RBFOX1-214ENST00000552089 WNT8BQ93098 351 aa13.54□□□□□ -0.24
RBFOX1-214ENST00000552089 PURBQ96QR8 312 aaKnown RBP13.54□□□□□ -0.24
RBFOX1-214ENST00000552089 SLC26A6Q9BXS9 759 aa13.54□□□□□ -0.24
RBFOX1-214ENST00000552089 CDV3Q9UKY7 258 aaKnown RBP13.54□□□□□ -0.24
RBFOX1-214ENST00000552089 FLNBO75369 2602 aaKnown RBP13.53□□□□□ -0.24
RBFOX1-214ENST00000552089 RBM47A0AV96 593 aaKnown RBP13.53□□□□□ -0.24
RBFOX1-214ENST00000552089 PTK7Q13308 1070 aa13.53□□□□□ -0.24
RBFOX1-214ENST00000552089 DHX8Q14562 1220 aaKnown RBP13.53□□□□□ -0.24
RBFOX1-214ENST00000552089 PLEKHG4Q58EX7 1191 aa13.53□□□□□ -0.24
RBFOX1-214ENST00000552089 COPS5Q92905 334 aa13.53□□□□□ -0.24
RBFOX1-214ENST00000552089 PGBD1Q96JS3 809 aa13.53□□□□□ -0.24
RBFOX1-214ENST00000552089 KAT14Q9H8E8 782 aa13.53□□□□□ -0.24
RBFOX1-214ENST00000552089 GTF2IRD1Q9UHL9 959 aa13.53□□□□□ -0.24
RBFOX1-214ENST00000552089 USP25Q9UHP3 1055 aa13.53□□□□□ -0.24
RBFOX1-214ENST00000552089 hCG_1984214I3L0E3 225 aa13.52□□□□□ -0.25
RBFOX1-214ENST00000552089 NKRFO15226 690 aaKnown RBP eCLIP13.52□□□□□ -0.25
RBFOX1-214ENST00000552089 CUTAO60888 179 aa13.52□□□□□ -0.25
RBFOX1-214ENST00000552089 TOP1P11387 765 aaKnown RBP13.52□□□□□ -0.25
RBFOX1-214ENST00000552089 BMP3P12645 472 aa13.52□□□□□ -0.25
RBFOX1-214ENST00000552089 DNAJB1P25685 340 aa13.52□□□□□ -0.25
RBFOX1-214ENST00000552089 ZRSR1Q15695 479 aaKnown RBP13.52□□□□□ -0.25
RBFOX1-214ENST00000552089 KANK3Q6NY19 840 aa13.52□□□□□ -0.25
RBFOX1-214ENST00000552089 KCTD1Q719H9 257 aa13.52□□□□□ -0.25
RBFOX1-214ENST00000552089 TEX2Q8IWB9 1127 aa13.52□□□□□ -0.25
RBFOX1-214ENST00000552089 ZNF713Q8N859 430 aaPredicted RBP13.52□□□□□ -0.25
RBFOX1-214ENST00000552089 ENGASEQ8NFI3 743 aa13.52□□□□□ -0.25
RBFOX1-214ENST00000552089 CCDC12Q8WUD4 166 aaPredicted RBP13.52□□□□□ -0.25
RBFOX1-214ENST00000552089 SENP2Q9HC62 589 aa13.52□□□□□ -0.25
RBFOX1-214ENST00000552089 CYP39A1Q9NYL5 469 aa13.52□□□□□ -0.25
RBFOX1-214ENST00000552089 SYNPO2Q9UMS6 1093 aa13.52□□□□□ -0.25
RBFOX1-214ENST00000552089 NOL7Q9UMY1 257 aaKnown RBP13.52□□□□□ -0.25
RBFOX1-214ENST00000552089 PLAGL2Q9UPG8 496 aa13.52□□□□□ -0.25
RBFOX1-214ENST00000552089 NR2E1Q9Y466 385 aa13.52□□□□□ -0.25
RBFOX1-214ENST00000552089 ASPMQ8IZT6 3477 aa13.52□□□□□ -0.25
RBFOX1-214ENST00000552089 ADGRA3Q8IWK6 1321 aa13.52□□□□□ -0.25
RBFOX1-214ENST00000552089 MYH15Q9Y2K3 1946 aa13.51□□□□□ -0.25
RBFOX1-214ENST00000552089 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.51□□□□□ -0.25
RBFOX1-214ENST00000552089 RBM10P98175 930 aaKnown RBP13.51□□□□□ -0.25
RBFOX1-214ENST00000552089 ZC3H14Q6PJT7 736 aaKnown RBP13.51□□□□□ -0.25
RBFOX1-214ENST00000552089 TMTC3Q6ZXV5 915 aa13.51□□□□□ -0.25
RBFOX1-214ENST00000552089 C7orf31Q8N865 590 aa13.51□□□□□ -0.25
RBFOX1-214ENST00000552089 SEPT8Q92599 483 aa13.51□□□□□ -0.25
RBFOX1-214ENST00000552089 CLP1Q92989 425 aaKnown RBP13.51□□□□□ -0.25
RBFOX1-214ENST00000552089 GMCL1Q96IK5 515 aa13.51□□□□□ -0.25
RBFOX1-214ENST00000552089 TRERF1Q96PN7 1200 aa13.51□□□□□ -0.25
RBFOX1-214ENST00000552089 ANO10Q9NW15 660 aa13.51□□□□□ -0.25
RBFOX1-214ENST00000552089 CCDC39Q9UFE4 941 aa13.51□□□□□ -0.25
RBFOX1-214ENST00000552089 FEM1BQ9UK73 627 aa13.51□□□□□ -0.25
RBFOX1-214ENST00000552089 PCDHA7Q9UN72 937 aa13.51□□□□□ -0.25
RBFOX1-214ENST00000552089 FRMPD2Q68DX3 1309 aaPredicted RBP13.51□□□□□ -0.25
RBFOX1-214ENST00000552089 SOBPA7XYQ1 873 aa13.5□□□□□ -0.25
RBFOX1-214ENST00000552089 RSPH10B2B2RC85 870 aa13.5□□□□□ -0.25
RBFOX1-214ENST00000552089 TMEM232C9JQI7 657 aa13.5□□□□□ -0.25
RBFOX1-214ENST00000552089 RSPH10BP0C881 870 aa13.5□□□□□ -0.25
RBFOX1-214ENST00000552089 ALAS1P13196 640 aa13.5□□□□□ -0.25
RBFOX1-214ENST00000552089 SLC1A4P43007 532 aa13.5□□□□□ -0.25
RBFOX1-214ENST00000552089 FUT2Q10981 343 aa13.5□□□□□ -0.25
RBFOX1-214ENST00000552089 SEMA3FQ13275 785 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms