RNA–Protein interactions for RNA: ENST00000551920.1

GCN1-209, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-209ENST00000551920 TCTN1Q2MV58 587 aa18.34■□□□□ 0.53
GCN1-209ENST00000551920 MTERF2Q49AM1 385 aa18.34■□□□□ 0.53
GCN1-209ENST00000551920 TMEM240Q5SV17 173 aa18.34■□□□□ 0.53
GCN1-209ENST00000551920 FOXD4L5Q5VV16 416 aaPredicted RBP18.34■□□□□ 0.53
GCN1-209ENST00000551920 DEFB128Q7Z7B8 93 aa18.34■□□□□ 0.53
GCN1-209ENST00000551920 TPH2Q8IWU9 490 aa18.34■□□□□ 0.53
GCN1-209ENST00000551920 C4orf19Q8IY42 314 aa18.34■□□□□ 0.53
GCN1-209ENST00000551920 TDHQ8IZJ6 230 aa18.34■□□□□ 0.53
GCN1-209ENST00000551920 NEK9Q8TD19 979 aa18.34■□□□□ 0.53
GCN1-209ENST00000551920 FOXD4L4Q8WXT5 416 aaPredicted RBP18.34■□□□□ 0.53
GCN1-209ENST00000551920 ZSWIM4Q9H7M6 989 aa18.34■□□□□ 0.53
GCN1-209ENST00000551920 NRBP2Q9NSY0 501 aa18.34■□□□□ 0.53
GCN1-209ENST00000551920 CLIC4Q9Y696 253 aa18.34■□□□□ 0.53
GCN1-209ENST00000551920 SMIM35A0A1B0GVV1 85 aa18.33■□□□□ 0.52
GCN1-209ENST00000551920 DDX11L8A8MPP1 907 aa18.33■□□□□ 0.52
GCN1-209ENST00000551920 RSPH10B2B2RC85 870 aa18.33■□□□□ 0.52
GCN1-209ENST00000551920 LYPLA2O95372 231 aa18.33■□□□□ 0.52
GCN1-209ENST00000551920 RSPH10BP0C881 870 aa18.33■□□□□ 0.52
GCN1-209ENST00000551920 YWHABP31946 246 aaKnown RBP18.33■□□□□ 0.52
GCN1-209ENST00000551920 CLCN3P51790 818 aa18.33■□□□□ 0.52
GCN1-209ENST00000551920 NPEPPSP55786 919 aa18.33■□□□□ 0.52
GCN1-209ENST00000551920 PTPAQ15257 358 aa18.33■□□□□ 0.52
GCN1-209ENST00000551920 SF3A1Q15459 793 aaKnown RBP18.33■□□□□ 0.52
GCN1-209ENST00000551920 FAM26DQ5JW98 314 aa18.33■□□□□ 0.52
GCN1-209ENST00000551920 CATSPER3Q86XQ3 398 aa18.33■□□□□ 0.52
GCN1-209ENST00000551920 KIAA0319LQ8IZA0 1049 aa18.33■□□□□ 0.52
GCN1-209ENST00000551920 LRRC71Q8N4P6 559 aa18.33■□□□□ 0.52
GCN1-209ENST00000551920 CEP131Q9UPN4 1083 aa18.33■□□□□ 0.52
GCN1-209ENST00000551920 A0A087WWV3 80 aa18.32■□□□□ 0.52
GCN1-209ENST00000551920 CXCL10P02778 98 aa18.32■□□□□ 0.52
GCN1-209ENST00000551920 ZSCAN22P10073 491 aaPredicted RBP18.32■□□□□ 0.52
GCN1-209ENST00000551920 RFC2P35250 354 aa18.32■□□□□ 0.52
GCN1-209ENST00000551920 GRIN1Q05586 938 aa18.32■□□□□ 0.52
GCN1-209ENST00000551920 TMEM62Q0P6H9 643 aa18.32■□□□□ 0.52
GCN1-209ENST00000551920 MKRN4PQ13434 485 aaPredicted RBP18.32■□□□□ 0.52
GCN1-209ENST00000551920 DRP2Q13474 957 aa18.32■□□□□ 0.52
GCN1-209ENST00000551920 ECM1Q16610 540 aa18.32■□□□□ 0.52
GCN1-209ENST00000551920 TMEM266Q2M3C6 531 aa18.32■□□□□ 0.52
GCN1-209ENST00000551920 POTEGQ6S5H5 508 aa18.32■□□□□ 0.52
GCN1-209ENST00000551920 ZNF365Q70YC5 407 aa18.32■□□□□ 0.52
GCN1-209ENST00000551920 USP28Q96RU2 1077 aa18.32■□□□□ 0.52
GCN1-209ENST00000551920 MMTAG2Q9BU76 263 aaKnown RBP18.32■□□□□ 0.52
GCN1-209ENST00000551920 ZSCAN16Q9H4T2 348 aaPredicted RBP18.32■□□□□ 0.52
GCN1-209ENST00000551920 CYP26B1Q9NR63 512 aa18.32■□□□□ 0.52
GCN1-209ENST00000551920 ARID2Q68CP9 1835 aa18.31■□□□□ 0.52
GCN1-209ENST00000551920 A0A1W2PPC1 479 aa18.31■□□□□ 0.52
GCN1-209ENST00000551920 VWA3AA6NCI4 1184 aa18.31■□□□□ 0.52
GCN1-209ENST00000551920 F13A1P00488 732 aa18.31■□□□□ 0.52
GCN1-209ENST00000551920 CDC25AP30304 524 aa18.31■□□□□ 0.52
GCN1-209ENST00000551920 MRPS6P82932 125 aaKnown RBP18.31■□□□□ 0.52
GCN1-209ENST00000551920 TBC1D8BQ0IIM8 1120 aa18.31■□□□□ 0.52
GCN1-209ENST00000551920 BECN1Q14457 450 aa18.31■□□□□ 0.52
GCN1-209ENST00000551920 RASIP1Q5U651 963 aa18.31■□□□□ 0.52
GCN1-209ENST00000551920 ARL6IP4Q66PJ3 421 aaKnown RBP18.31■□□□□ 0.52
GCN1-209ENST00000551920 PSRC1Q6PGN9 363 aaPredicted RBP18.31■□□□□ 0.52
GCN1-209ENST00000551920 DTHD1Q6ZMT9 781 aa18.31■□□□□ 0.52
GCN1-209ENST00000551920 POLR3CQ9BUI4 534 aaPredicted RBP18.31■□□□□ 0.52
GCN1-209ENST00000551920 TUFT1Q9NNX1 390 aa18.31■□□□□ 0.52
GCN1-209ENST00000551920 CXXC1Q9P0U4 656 aaPredicted RBP18.31■□□□□ 0.52
GCN1-209ENST00000551920 LRWD1Q9UFC0 647 aa18.31■□□□□ 0.52
GCN1-209ENST00000551920 ZDHHC9Q9Y397 364 aa18.31■□□□□ 0.52
GCN1-209ENST00000551920 CDY2AQ9Y6F7 541 aa18.31■□□□□ 0.52
GCN1-209ENST00000551920 IGKV6-21A0A0C4DH24 114 aa18.3■□□□□ 0.52
GCN1-209ENST00000551920 MAGEB2O15479 319 aa18.3■□□□□ 0.52
GCN1-209ENST00000551920 DKC1O60832 514 aaKnown RBP eCLIP18.3■□□□□ 0.52
GCN1-209ENST00000551920 VTNP04004 478 aa18.3■□□□□ 0.52
GCN1-209ENST00000551920 PFKMP08237 780 aa18.3■□□□□ 0.52
GCN1-209ENST00000551920 RPA1P27694 616 aa18.3■□□□□ 0.52
GCN1-209ENST00000551920 CEBPZQ03701 1054 aaKnown RBP18.3■□□□□ 0.52
GCN1-209ENST00000551920 PDIA5Q14554 519 aa18.3■□□□□ 0.52
GCN1-209ENST00000551920 HABP4Q5JVS0 413 aaKnown RBP18.3■□□□□ 0.52
GCN1-209ENST00000551920 OTOP2Q7RTS6 562 aa18.3■□□□□ 0.52
GCN1-209ENST00000551920 RSPH3Q86UC2 560 aa18.3■□□□□ 0.52
GCN1-209ENST00000551920 METTL13Q8N6R0 699 aa18.3■□□□□ 0.52
GCN1-209ENST00000551920 TET1Q8NFU7 2136 aa18.3■□□□□ 0.52
GCN1-209ENST00000551920 PIGOQ8TEQ8 1089 aa18.3■□□□□ 0.52
GCN1-209ENST00000551920 CEP170P1Q96L14 293 aa18.3■□□□□ 0.52
GCN1-209ENST00000551920 RNPC3Q96LT9 517 aaKnown RBP18.3■□□□□ 0.52
GCN1-209ENST00000551920 PPP1R16BQ96T49 567 aa18.3■□□□□ 0.52
GCN1-209ENST00000551920 KAT6AQ92794 2004 aa18.29■□□□□ 0.52
GCN1-209ENST00000551920 MAFO75444 373 aaPredicted RBP18.29■□□□□ 0.52
GCN1-209ENST00000551920 BMP15O95972 392 aa18.29■□□□□ 0.52
GCN1-209ENST00000551920 GHRP10912 638 aa18.29■□□□□ 0.52
GCN1-209ENST00000551920 LPIN1Q14693 890 aa18.29■□□□□ 0.52
GCN1-209ENST00000551920 HAUS3Q68CZ6 603 aa18.29■□□□□ 0.52
GCN1-209ENST00000551920 EFCAB12Q6NXP0 572 aa18.29■□□□□ 0.52
GCN1-209ENST00000551920 ERMNQ8TAM6 284 aa18.29■□□□□ 0.52
GCN1-209ENST00000551920 SNX29Q8TEQ0 813 aa18.29■□□□□ 0.52
GCN1-209ENST00000551920 HERVK_113Q902F9 699 aa18.29■□□□□ 0.52
GCN1-209ENST00000551920 DHX33Q9H6R0 707 aaKnown RBP18.29■□□□□ 0.52
GCN1-209ENST00000551920 CDHR5Q9HBB8 845 aa18.29■□□□□ 0.52
GCN1-209ENST00000551920 BMP2KQ9NSY1 1161 aaPredicted RBP18.29■□□□□ 0.52
GCN1-209ENST00000551920 MYH15Q9Y2K3 1946 aa18.29■□□□□ 0.52
GCN1-209ENST00000551920 SOX1O00570 391 aaPredicted RBP18.28■□□□□ 0.52
GCN1-209ENST00000551920 PARNO95453 639 aaKnown RBP18.28■□□□□ 0.52
GCN1-209ENST00000551920 BRD1O95696 1058 aa18.28■□□□□ 0.52
GCN1-209ENST00000551920 RPLP2P05387 115 aaKnown RBP18.28■□□□□ 0.52
GCN1-209ENST00000551920 CCT6AP40227 531 aaKnown RBP18.28■□□□□ 0.52
GCN1-209ENST00000551920 NASPP49321 788 aaPredicted RBP18.28■□□□□ 0.52
GCN1-209ENST00000551920 RARRES1P49788 294 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms