RNA–Protein interactions for RNA: ENST00000551634.5

NPAS3-211, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 5

Gene NPAS3, Length 2,718 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-211ENST00000551634 STAT3P40763 770 aa25.79■■□□□ 1.72
NPAS3-211ENST00000551634 QRICH1Q2TAL8 776 aa25.79■■□□□ 1.72
NPAS3-211ENST00000551634 SFR1Q86XK3 245 aa25.79■■□□□ 1.72
NPAS3-211ENST00000551634 ETNPPLQ8TBG4 499 aa25.79■■□□□ 1.72
NPAS3-211ENST00000551634 CRYGNQ8WXF5 182 aa25.79■■□□□ 1.72
NPAS3-211ENST00000551634 PCDHA1Q9Y5I3 950 aa25.79■■□□□ 1.72
NPAS3-211ENST00000551634 AFF2P51816 1311 aa25.78■■□□□ 1.72
NPAS3-211ENST00000551634 TAF1LQ8IZX4 1826 aa25.78■■□□□ 1.72
NPAS3-211ENST00000551634 PRPF38AQ8NAV1 312 aaKnown RBP25.78■■□□□ 1.72
NPAS3-211ENST00000551634 CCDC26Q8TAB7 109 aa25.78■■□□□ 1.72
NPAS3-211ENST00000551634 CEP89Q96ST8 783 aa25.78■■□□□ 1.72
NPAS3-211ENST00000551634 UAP1Q16222 522 aaPredicted RBP25.78■■□□□ 1.72
NPAS3-211ENST00000551634 SWT1Q5T5J6 900 aaKnown RBP25.78■■□□□ 1.72
NPAS3-211ENST00000551634 CCDC17Q96LX7 622 aa25.78■■□□□ 1.72
NPAS3-211ENST00000551634 REEP2Q9BRK0 252 aa25.78■■□□□ 1.72
NPAS3-211ENST00000551634 SIX2Q9NPC8 291 aa25.78■■□□□ 1.72
NPAS3-211ENST00000551634 KRIT1O00522 736 aa25.77■■□□□ 1.72
NPAS3-211ENST00000551634 AKAP3O75969 853 aa25.77■■□□□ 1.72
NPAS3-211ENST00000551634 FERP16591 822 aa25.77■■□□□ 1.72
NPAS3-211ENST00000551634 GTF2IP78347 998 aa25.77■■□□□ 1.72
NPAS3-211ENST00000551634 SEC14L1Q92503 715 aa25.77■■□□□ 1.72
NPAS3-211ENST00000551634 TMCO5BA8MYB1 307 aa25.77■■□□□ 1.72
NPAS3-211ENST00000551634 CTNNA1P35221 906 aaKnown RBP25.77■■□□□ 1.72
NPAS3-211ENST00000551634 FNTAP49354 379 aa25.77■■□□□ 1.72
NPAS3-211ENST00000551634 Q4G0T1 1027 aa25.77■■□□□ 1.72
NPAS3-211ENST00000551634 AGBL2Q5U5Z8 902 aa25.77■■□□□ 1.72
NPAS3-211ENST00000551634 NR3C1P04150 777 aa25.76■■□□□ 1.71
NPAS3-211ENST00000551634 HNRNPH1P31943 449 aaKnown RBP25.76■■□□□ 1.71
NPAS3-211ENST00000551634 ARHGAP4P98171 946 aa25.76■■□□□ 1.71
NPAS3-211ENST00000551634 SLC35C1Q96A29 364 aa25.76■■□□□ 1.71
NPAS3-211ENST00000551634 AP1M1Q9BXS5 423 aa25.76■■□□□ 1.71
NPAS3-211ENST00000551634 GOLPH3Q9H4A6 298 aa25.76■■□□□ 1.71
NPAS3-211ENST00000551634 TTC7AQ9ULT0 858 aaPredicted RBP25.76■■□□□ 1.71
NPAS3-211ENST00000551634 HLA-DOAP06340 250 aa25.76■■□□□ 1.71
NPAS3-211ENST00000551634 SPATA31C1P0DKV0 1188 aa25.76■■□□□ 1.71
NPAS3-211ENST00000551634 DCAF17Q5H9S7 520 aaPredicted RBP25.76■■□□□ 1.71
NPAS3-211ENST00000551634 KCTD17Q8N5Z5 321 aa25.76■■□□□ 1.71
NPAS3-211ENST00000551634 DDX47Q9H0S4 455 aaKnown RBP25.76■■□□□ 1.71
NPAS3-211ENST00000551634 CAPN7Q9Y6W3 813 aa25.76■■□□□ 1.71
NPAS3-211ENST00000551634 PSMC6P62333 389 aa25.75■■□□□ 1.71
NPAS3-211ENST00000551634 ZNF844Q08AG5 666 aa25.75■■□□□ 1.71
NPAS3-211ENST00000551634 PABPC4Q13310 644 aaKnown RBP eCLIP25.75■■□□□ 1.71
NPAS3-211ENST00000551634 NT5DC3Q86UY8 548 aa25.75■■□□□ 1.71
NPAS3-211ENST00000551634 DCAF4Q8WV16 495 aa25.75■■□□□ 1.71
NPAS3-211ENST00000551634 HES6Q96HZ4 224 aa25.75■■□□□ 1.71
NPAS3-211ENST00000551634 FAM20AQ96MK3 541 aa25.75■■□□□ 1.71
NPAS3-211ENST00000551634 USP21Q9UK80 565 aa25.75■■□□□ 1.71
NPAS3-211ENST00000551634 MEIS2O14770 477 aa25.75■■□□□ 1.71
NPAS3-211ENST00000551634 UIMC1Q96RL1 719 aa25.75■■□□□ 1.71
NPAS3-211ENST00000551634 SLC12A6Q9UHW9 1150 aa25.75■■□□□ 1.71
NPAS3-211ENST00000551634 C6orf229H3BNL8 230 aa25.74■■□□□ 1.71
NPAS3-211ENST00000551634 MPHOSPH10O00566 681 aaKnown RBP25.74■■□□□ 1.71
NPAS3-211ENST00000551634 DDX3XO00571 662 aaKnown RBP eCLIP25.74■■□□□ 1.71
NPAS3-211ENST00000551634 SEC24CP53992 1094 aa25.74■■□□□ 1.71
NPAS3-211ENST00000551634 VPS72Q15906 364 aa25.74■■□□□ 1.71
NPAS3-211ENST00000551634 TCERG1LQ5VWI1 586 aa25.74■■□□□ 1.71
NPAS3-211ENST00000551634 FAM114A2Q9NRY5 505 aa25.74■■□□□ 1.71
NPAS3-211ENST00000551634 USP40Q9NVE5 1235 aa25.74■■□□□ 1.71
NPAS3-211ENST00000551634 GCNT4Q9P109 453 aa25.74■■□□□ 1.71
NPAS3-211ENST00000551634 RGS17Q9UGC6 210 aaPredicted RBP25.74■■□□□ 1.71
NPAS3-211ENST00000551634 DIS3Q9Y2L1 958 aaKnown RBP25.74■■□□□ 1.71
NPAS3-211ENST00000551634 ASTN1O14525 1302 aa25.74■■□□□ 1.71
NPAS3-211ENST00000551634 HOXA10P31260 410 aaPredicted RBP25.74■■□□□ 1.71
NPAS3-211ENST00000551634 DRP2Q13474 957 aa25.74■■□□□ 1.71
NPAS3-211ENST00000551634 FBXW10Q5XX13 1052 aa25.74■■□□□ 1.71
NPAS3-211ENST00000551634 DDX42Q86XP3 938 aaKnown RBP eCLIP25.74■■□□□ 1.71
NPAS3-211ENST00000551634 MKL1Q969V6 931 aa25.74■■□□□ 1.71
NPAS3-211ENST00000551634 YY1AP1Q9H869 796 aa25.74■■□□□ 1.71
NPAS3-211ENST00000551634 E7EVH7 732 aa25.73■■□□□ 1.71
NPAS3-211ENST00000551634 STAT1P42224 750 aa25.73■■□□□ 1.71
NPAS3-211ENST00000551634 PRR16Q569H4 304 aa25.73■■□□□ 1.71
NPAS3-211ENST00000551634 SPDYCQ5MJ68 293 aa25.73■■□□□ 1.71
NPAS3-211ENST00000551634 COA1Q9GZY4 146 aa25.73■■□□□ 1.71
NPAS3-211ENST00000551634 NEUROG2Q9H2A3 272 aa25.73■■□□□ 1.71
NPAS3-211ENST00000551634 QSER1Q2KHR3 1735 aa25.73■■□□□ 1.71
NPAS3-211ENST00000551634 ADRA2BP18089 450 aa25.73■■□□□ 1.71
NPAS3-211ENST00000551634 HPDP32754 393 aaPredicted RBP25.73■■□□□ 1.71
NPAS3-211ENST00000551634 DAAM2Q86T65 1068 aa25.73■■□□□ 1.71
NPAS3-211ENST00000551634 POLD4Q9HCU8 107 aa25.73■■□□□ 1.71
NPAS3-211ENST00000551634 AMFRQ9UKV5 643 aa25.73■■□□□ 1.71
NPAS3-211ENST00000551634 FOSP01100 380 aaPredicted RBP25.72■■□□□ 1.71
NPAS3-211ENST00000551634 HDLBPQ00341 1268 aaKnown RBP25.72■■□□□ 1.71
NPAS3-211ENST00000551634 C6orf89Q6UWU4 347 aa25.72■■□□□ 1.71
NPAS3-211ENST00000551634 OLFML3Q9NRN5 406 aa25.72■■□□□ 1.71
NPAS3-211ENST00000551634 MYO1FO00160 1098 aa25.72■■□□□ 1.71
NPAS3-211ENST00000551634 PLCB4Q15147 1175 aa25.72■■□□□ 1.71
NPAS3-211ENST00000551634 PPP2R5EQ16537 467 aa25.72■■□□□ 1.71
NPAS3-211ENST00000551634 NFIL3Q16649 462 aa25.72■■□□□ 1.71
NPAS3-211ENST00000551634 KCNV1Q6PIU1 500 aa25.72■■□□□ 1.71
NPAS3-211ENST00000551634 CENPHQ9H3R5 247 aa25.72■■□□□ 1.71
NPAS3-211ENST00000551634 AMACRQ9UHK6 382 aa25.72■■□□□ 1.71
NPAS3-211ENST00000551634 LY75O60449 1722 aa25.72■■□□□ 1.71
NPAS3-211ENST00000551634 GMNCA6NCL1 334 aa25.72■■□□□ 1.71
NPAS3-211ENST00000551634 MEIS1O00470 390 aa25.72■■□□□ 1.71
NPAS3-211ENST00000551634 GAP43P17677 238 aa25.72■■□□□ 1.71
NPAS3-211ENST00000551634 TMC3Q7Z5M5 1100 aa25.72■■□□□ 1.71
NPAS3-211ENST00000551634 SLC30A5Q8TAD4 765 aa25.72■■□□□ 1.71
NPAS3-211ENST00000551634 U2AF1L4Q8WU68 220 aaKnown RBP25.72■■□□□ 1.71
NPAS3-211ENST00000551634 LENG9Q96B70 501 aa25.72■■□□□ 1.71
NPAS3-211ENST00000551634 BORCS6Q96GS4 357 aa25.72■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms