RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 ARHGAP29Q52LW3 1261 aa12.67□□□□□ -0.38
RAB5C-208ENST00000551338 TREML2Q5T2D2 321 aa12.67□□□□□ -0.38
RAB5C-208ENST00000551338 C9orf131Q5VYM1 1079 aa12.67□□□□□ -0.38
RAB5C-208ENST00000551338 NLRX1Q86UT6 975 aa12.67□□□□□ -0.38
RAB5C-208ENST00000551338 SULF1Q8IWU6 871 aa12.67□□□□□ -0.38
RAB5C-208ENST00000551338 C4orf19Q8IY42 314 aa12.67□□□□□ -0.38
RAB5C-208ENST00000551338 SLC35F6Q8N357 371 aa12.67□□□□□ -0.38
RAB5C-208ENST00000551338 ZNF397Q8NF99 534 aaPredicted RBP12.67□□□□□ -0.38
RAB5C-208ENST00000551338 RBM46Q8TBY0 533 aaKnown RBP12.67□□□□□ -0.38
RAB5C-208ENST00000551338 EIF3CQ99613 913 aaKnown RBP12.67□□□□□ -0.38
RAB5C-208ENST00000551338 SENP7Q9BQF6 1050 aa12.67□□□□□ -0.38
RAB5C-208ENST00000551338 SYT17Q9BSW7 474 aa12.67□□□□□ -0.38
RAB5C-208ENST00000551338 GANQ9H2C0 597 aa12.67□□□□□ -0.38
RAB5C-208ENST00000551338 IKZF4Q9H2S9 585 aa12.67□□□□□ -0.38
RAB5C-208ENST00000551338 CEP72Q9P209 647 aa12.67□□□□□ -0.38
RAB5C-208ENST00000551338 PLAGL2Q9UPG8 496 aa12.67□□□□□ -0.38
RAB5C-208ENST00000551338 PLXNB2O15031 1838 aa12.67□□□□□ -0.38
RAB5C-208ENST00000551338 LRRC53A6NM62 1247 aa12.66□□□□□ -0.38
RAB5C-208ENST00000551338 WDR64B1ANS9 1081 aa12.66□□□□□ -0.38
RAB5C-208ENST00000551338 CLIC2O15247 247 aa12.66□□□□□ -0.38
RAB5C-208ENST00000551338 USO1O60763 962 aaKnown RBP12.66□□□□□ -0.38
RAB5C-208ENST00000551338 AKAP3O75969 853 aa12.66□□□□□ -0.38
RAB5C-208ENST00000551338 PLEKP08567 350 aaPredicted RBP12.66□□□□□ -0.38
RAB5C-208ENST00000551338 KCNA2P16389 499 aa12.66□□□□□ -0.38
RAB5C-208ENST00000551338 SFNP31947 248 aa12.66□□□□□ -0.38
RAB5C-208ENST00000551338 PPP2R3AQ06190 1150 aa12.66□□□□□ -0.38
RAB5C-208ENST00000551338 KCNH2Q12809 1159 aa12.66□□□□□ -0.38
RAB5C-208ENST00000551338 ODR4Q5SWX8 454 aa12.66□□□□□ -0.38
RAB5C-208ENST00000551338 ZNF746Q6NUN9 644 aaPredicted RBP12.66□□□□□ -0.38
RAB5C-208ENST00000551338 DPY19L2P1Q6NXN4 242 aa12.66□□□□□ -0.38
RAB5C-208ENST00000551338 LBX2Q6XYB7 198 aa12.66□□□□□ -0.38
RAB5C-208ENST00000551338 ZNF662Q6ZS27 426 aa12.66□□□□□ -0.38
RAB5C-208ENST00000551338 ZNF720Q7Z2F6 126 aa12.66□□□□□ -0.38
RAB5C-208ENST00000551338 KSR1Q8IVT5 923 aa12.66□□□□□ -0.38
RAB5C-208ENST00000551338 FAM178BQ8IXR5 827 aa12.66□□□□□ -0.38
RAB5C-208ENST00000551338 CCDC170Q8IYT3 715 aa12.66□□□□□ -0.38
RAB5C-208ENST00000551338 RDM1Q8NG50 284 aa12.66□□□□□ -0.38
RAB5C-208ENST00000551338 NHEJ1Q9H9Q4 299 aaPredicted RBP12.66□□□□□ -0.38
RAB5C-208ENST00000551338 ZNHIT6Q9NWK9 470 aaKnown RBP12.66□□□□□ -0.38
RAB5C-208ENST00000551338 HOXC10Q9NYD6 342 aa12.66□□□□□ -0.38
RAB5C-208ENST00000551338 ARHGAP20Q9P2F6 1191 aa12.66□□□□□ -0.38
RAB5C-208ENST00000551338 ARMCX3Q9UH62 379 aaPredicted RBP12.66□□□□□ -0.38
RAB5C-208ENST00000551338 SAMM50Q9Y512 469 aa12.66□□□□□ -0.38
RAB5C-208ENST00000551338 CSADQ9Y600 493 aa12.66□□□□□ -0.38
RAB5C-208ENST00000551338 NFASCO94856 1347 aa12.65□□□□□ -0.38
RAB5C-208ENST00000551338 TMEM150BA6NC51 233 aa12.65□□□□□ -0.38
RAB5C-208ENST00000551338 BACH1O14867 736 aa12.65□□□□□ -0.38
RAB5C-208ENST00000551338 KIF5CO60282 957 aa12.65□□□□□ -0.38
RAB5C-208ENST00000551338 MAPTP10636 758 aaKnown RBP12.65□□□□□ -0.38
RAB5C-208ENST00000551338 EPB41P11171 864 aaKnown RBP12.65□□□□□ -0.38
RAB5C-208ENST00000551338 RPL13P26373 211 aaKnown RBP12.65□□□□□ -0.38
RAB5C-208ENST00000551338 YWHABP31946 246 aaKnown RBP12.65□□□□□ -0.38
RAB5C-208ENST00000551338 IREB2P48200 963 aaKnown RBP12.65□□□□□ -0.38
RAB5C-208ENST00000551338 PSMC5P62195 406 aa12.65□□□□□ -0.38
RAB5C-208ENST00000551338 PLS1Q14651 629 aa12.65□□□□□ -0.38
RAB5C-208ENST00000551338 ZNF569Q5MCW4 686 aa12.65□□□□□ -0.38
RAB5C-208ENST00000551338 STXBP4Q6ZWJ1 553 aa12.65□□□□□ -0.38
RAB5C-208ENST00000551338 RRAGAQ7L523 313 aa12.65□□□□□ -0.38
RAB5C-208ENST00000551338 CHST13Q8NET6 341 aa12.65□□□□□ -0.38
RAB5C-208ENST00000551338 NSUN6Q8TEA1 469 aaKnown RBP12.65□□□□□ -0.38
RAB5C-208ENST00000551338 CDCA5Q96FF9 252 aa12.65□□□□□ -0.38
RAB5C-208ENST00000551338 BORCS6Q96GS4 357 aa12.65□□□□□ -0.38
RAB5C-208ENST00000551338 L3MBTL3Q96JM7 780 aaPredicted RBP12.65□□□□□ -0.38
RAB5C-208ENST00000551338 HAUS4Q9H6D7 363 aa12.65□□□□□ -0.38
RAB5C-208ENST00000551338 ELP3Q9H9T3 547 aa12.65□□□□□ -0.38
RAB5C-208ENST00000551338 METTL14Q9HCE5 456 aaKnown RBP12.65□□□□□ -0.38
RAB5C-208ENST00000551338 ANKEF1Q9NU02 776 aa12.65□□□□□ -0.38
RAB5C-208ENST00000551338 BTBD7Q9P203 1132 aa12.65□□□□□ -0.38
RAB5C-208ENST00000551338 TRIM10Q9UDY6 481 aa12.65□□□□□ -0.38
RAB5C-208ENST00000551338 TCEAL9Q9UHQ7 104 aa12.65□□□□□ -0.38
RAB5C-208ENST00000551338 MRFAP1Q9Y605 127 aa12.65□□□□□ -0.38
RAB5C-208ENST00000551338 A0A0G2JLL6 359 aaPredicted RBP12.64□□□□□ -0.39
RAB5C-208ENST00000551338 K7ENM7 598 aa12.64□□□□□ -0.39
RAB5C-208ENST00000551338 ZNF263O14978 683 aa12.64□□□□□ -0.39
RAB5C-208ENST00000551338 MAFGO15525 162 aa12.64□□□□□ -0.39
RAB5C-208ENST00000551338 PPP1R12BO60237 982 aaPredicted RBP12.64□□□□□ -0.39
RAB5C-208ENST00000551338 PEX10O60683 326 aa12.64□□□□□ -0.39
RAB5C-208ENST00000551338 TADA3O75528 432 aa12.64□□□□□ -0.39
RAB5C-208ENST00000551338 STBD1O95210 358 aa12.64□□□□□ -0.39
RAB5C-208ENST00000551338 AFPP02771 609 aaKnown RBP12.64□□□□□ -0.39
RAB5C-208ENST00000551338 EIF4A3P38919 411 aaKnown RBP12.64□□□□□ -0.39
RAB5C-208ENST00000551338 KRT83P78385 493 aa12.64□□□□□ -0.39
RAB5C-208ENST00000551338 APBA1Q02410 837 aa12.64□□□□□ -0.39
RAB5C-208ENST00000551338 MAPK8IP2Q13387 824 aaPredicted RBP12.64□□□□□ -0.39
RAB5C-208ENST00000551338 HGSNATQ68CP4 663 aa12.64□□□□□ -0.39
RAB5C-208ENST00000551338 PLA2G4FQ68DD2 849 aa12.64□□□□□ -0.39
RAB5C-208ENST00000551338 GADL1Q6ZQY3 521 aa12.64□□□□□ -0.39
RAB5C-208ENST00000551338 CACNA2D4Q7Z3S7 1137 aa12.64□□□□□ -0.39
RAB5C-208ENST00000551338 PRRT2Q7Z6L0 340 aaPredicted RBP12.64□□□□□ -0.39
RAB5C-208ENST00000551338 RIOX2Q8IUF8 465 aa12.64□□□□□ -0.39
RAB5C-208ENST00000551338 SLC35C1Q96A29 364 aa12.64□□□□□ -0.39
RAB5C-208ENST00000551338 JAKMIP2Q96AA8 810 aa12.64□□□□□ -0.39
RAB5C-208ENST00000551338 CLMNQ96JQ2 1002 aa12.64□□□□□ -0.39
RAB5C-208ENST00000551338 MKNK1Q9BUB5 465 aa12.64□□□□□ -0.39
RAB5C-208ENST00000551338 TIPINQ9BVW5 301 aa12.64□□□□□ -0.39
RAB5C-208ENST00000551338 CARD6Q9BX69 1037 aa12.64□□□□□ -0.39
RAB5C-208ENST00000551338 MOV10L1Q9BXT6 1211 aaKnown RBP12.64□□□□□ -0.39
RAB5C-208ENST00000551338 NLRC4Q9NPP4 1024 aa12.64□□□□□ -0.39
RAB5C-208ENST00000551338 AGPAT3Q9NRZ7 376 aa12.64□□□□□ -0.39
RAB5C-208ENST00000551338 DMAC2Q9NW81 257 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms