RNA–Protein interactions for RNA: ENST00000551242.5

ERBB3-219, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 2,755 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-219ENST00000551242 TFAP4Q01664 338 aa13.28□□□□□ -0.28
ERBB3-219ENST00000551242 CACNB1Q02641 598 aaPredicted RBP13.28□□□□□ -0.28
ERBB3-219ENST00000551242 ZNF211Q13398 564 aaPredicted RBP13.28□□□□□ -0.28
ERBB3-219ENST00000551242 NONOQ15233 471 aaKnown RBP eCLIP13.28□□□□□ -0.28
ERBB3-219ENST00000551242 GALNTL6Q49A17 601 aa13.28□□□□□ -0.28
ERBB3-219ENST00000551242 ZCWPW2Q504Y3 356 aa13.28□□□□□ -0.28
ERBB3-219ENST00000551242 OTUD6AQ7L8S5 288 aa13.28□□□□□ -0.28
ERBB3-219ENST00000551242 NT5DC3Q86UY8 548 aa13.28□□□□□ -0.28
ERBB3-219ENST00000551242 TRIM59Q8IWR1 403 aa13.28□□□□□ -0.28
ERBB3-219ENST00000551242 TBCKQ8TEA7 893 aa13.28□□□□□ -0.28
ERBB3-219ENST00000551242 NSRP1Q9H0G5 558 aaKnown RBP13.28□□□□□ -0.28
ERBB3-219ENST00000551242 ZFATQ9P243 1243 aa13.28□□□□□ -0.28
ERBB3-219ENST00000551242 USP15Q9Y4E8 981 aaPredicted RBP13.28□□□□□ -0.28
ERBB3-219ENST00000551242 A6NHS1 94 aa13.28□□□□□ -0.28
ERBB3-219ENST00000551242 BTNL10A8MVZ5 291 aa13.28□□□□□ -0.28
ERBB3-219ENST00000551242 FOXO6A8MYZ6 492 aa13.28□□□□□ -0.28
ERBB3-219ENST00000551242 MAP3K13O43283 966 aa13.28□□□□□ -0.28
ERBB3-219ENST00000551242 STARD3NLO95772 234 aa13.28□□□□□ -0.28
ERBB3-219ENST00000551242 FGFR4P22455 802 aa13.28□□□□□ -0.28
ERBB3-219ENST00000551242 PDE6CP51160 858 aa13.28□□□□□ -0.28
ERBB3-219ENST00000551242 CHRNDQ07001 517 aa13.28□□□□□ -0.28
ERBB3-219ENST00000551242 KLRC3Q07444 240 aa13.28□□□□□ -0.28
ERBB3-219ENST00000551242 BNIP1Q12981 228 aa13.28□□□□□ -0.28
ERBB3-219ENST00000551242 RBBP5Q15291 538 aaKnown RBP13.28□□□□□ -0.28
ERBB3-219ENST00000551242 CNGA2Q16280 664 aa13.28□□□□□ -0.28
ERBB3-219ENST00000551242 IFI16Q16666 785 aaKnown RBP13.28□□□□□ -0.28
ERBB3-219ENST00000551242 ARHGAP27Q6ZUM4 889 aa13.28□□□□□ -0.28
ERBB3-219ENST00000551242 NEK8Q86SG6 692 aa13.28□□□□□ -0.28
ERBB3-219ENST00000551242 FITM2Q8N6M3 262 aa13.28□□□□□ -0.28
ERBB3-219ENST00000551242 DAGLBQ8NCG7 672 aa13.28□□□□□ -0.28
ERBB3-219ENST00000551242 DYDC1Q8WWB3 177 aa13.28□□□□□ -0.28
ERBB3-219ENST00000551242 OSGEPQ9NPF4 335 aa13.28□□□□□ -0.28
ERBB3-219ENST00000551242 DCP1AQ9NPI6 582 aaPredicted RBP13.28□□□□□ -0.28
ERBB3-219ENST00000551242 RIC8AQ9NPQ8 531 aa13.28□□□□□ -0.28
ERBB3-219ENST00000551242 STXBP5LQ9Y2K9 1186 aa13.28□□□□□ -0.28
ERBB3-219ENST00000551242 RTCBQ9Y3I0 505 aaKnown RBP13.28□□□□□ -0.28
ERBB3-219ENST00000551242 CICQ96RK0 1608 aaPredicted RBP13.28□□□□□ -0.28
ERBB3-219ENST00000551242 DPPA5A6NC42 116 aa13.27□□□□□ -0.28
ERBB3-219ENST00000551242 USP17L3A6NCW0 530 aa13.27□□□□□ -0.28
ERBB3-219ENST00000551242 USP17L4A6NCW7 530 aa13.27□□□□□ -0.28
ERBB3-219ENST00000551242 CREB1P16220 341 aa13.27□□□□□ -0.28
ERBB3-219ENST00000551242 ATP4AP20648 1035 aa13.27□□□□□ -0.28
ERBB3-219ENST00000551242 CTCFP49711 727 aaPredicted RBP13.27□□□□□ -0.28
ERBB3-219ENST00000551242 RWDD2BP57060 319 aa13.27□□□□□ -0.28
ERBB3-219ENST00000551242 DUPD1Q68J44 220 aa13.27□□□□□ -0.28
ERBB3-219ENST00000551242 USP17L1Q7RTZ2 530 aa13.27□□□□□ -0.28
ERBB3-219ENST00000551242 RBM46Q8TBY0 533 aaKnown RBP13.27□□□□□ -0.28
ERBB3-219ENST00000551242 NAF1Q96HR8 494 aaKnown RBP13.27□□□□□ -0.28
ERBB3-219ENST00000551242 UIMC1Q96RL1 719 aa13.27□□□□□ -0.28
ERBB3-219ENST00000551242 ERP44Q9BS26 406 aa13.27□□□□□ -0.28
ERBB3-219ENST00000551242 TMOD3Q9NYL9 352 aa13.27□□□□□ -0.28
ERBB3-219ENST00000551242 BIN2Q9UBW5 565 aaPredicted RBP13.27□□□□□ -0.28
ERBB3-219ENST00000551242 NKX1-2Q9UD57 310 aaPredicted RBP13.27□□□□□ -0.28
ERBB3-219ENST00000551242 ZMYND8Q9ULU4 1186 aaPredicted RBP13.27□□□□□ -0.28
ERBB3-219ENST00000551242 DAAM1Q9Y4D1 1078 aa13.27□□□□□ -0.28
ERBB3-219ENST00000551242 CCDC88AQ3V6T2 1871 aa13.27□□□□□ -0.28
ERBB3-219ENST00000551242 PCP11498 1178 aaKnown RBP13.27□□□□□ -0.29
ERBB3-219ENST00000551242 PECAM1P16284 738 aaPredicted RBP13.27□□□□□ -0.29
ERBB3-219ENST00000551242 KCNH2Q12809 1159 aa13.27□□□□□ -0.29
ERBB3-219ENST00000551242 COASYQ13057 564 aa13.27□□□□□ -0.29
ERBB3-219ENST00000551242 DCAF12L1Q5VU92 463 aa13.27□□□□□ -0.29
ERBB3-219ENST00000551242 NUGGCQ68CJ6 796 aa13.27□□□□□ -0.29
ERBB3-219ENST00000551242 PROM2Q8N271 834 aa13.27□□□□□ -0.29
ERBB3-219ENST00000551242 RAD54LQ92698 747 aa13.27□□□□□ -0.29
ERBB3-219ENST00000551242 GJA10Q969M2 543 aa13.27□□□□□ -0.29
ERBB3-219ENST00000551242 RAB17Q9H0T7 212 aa13.27□□□□□ -0.29
ERBB3-219ENST00000551242 ARHGEF3Q9NR81 526 aa13.27□□□□□ -0.29
ERBB3-219ENST00000551242 TMEM260Q9NX78 707 aa13.27□□□□□ -0.29
ERBB3-219ENST00000551242 CPSF2Q9P2I0 782 aaKnown RBP13.27□□□□□ -0.29
ERBB3-219ENST00000551242 SUCLA2Q9P2R7 463 aaPredicted RBP13.27□□□□□ -0.29
ERBB3-219ENST00000551242 RPTORQ8N122 1335 aa13.27□□□□□ -0.29
ERBB3-219ENST00000551242 SMCO2A6NFE2 343 aa13.26□□□□□ -0.29
ERBB3-219ENST00000551242 OAS1P00973 400 aaKnown RBP13.26□□□□□ -0.29
ERBB3-219ENST00000551242 TUBP50607 506 aa13.26□□□□□ -0.29
ERBB3-219ENST00000551242 ZNF131P52739 623 aa13.26□□□□□ -0.29
ERBB3-219ENST00000551242 LACTBP83111 547 aaPredicted RBP13.26□□□□□ -0.29
ERBB3-219ENST00000551242 ATP11AP98196 1134 aa13.26□□□□□ -0.29
ERBB3-219ENST00000551242 ECM1Q16610 540 aa13.26□□□□□ -0.29
ERBB3-219ENST00000551242 SOGA3Q5TF21 947 aa13.26□□□□□ -0.29
ERBB3-219ENST00000551242 ZDHHC24Q6UX98 284 aa13.26□□□□□ -0.29
ERBB3-219ENST00000551242 SNX29Q8TEQ0 813 aa13.26□□□□□ -0.29
ERBB3-219ENST00000551242 RMDN2Q96LZ7 410 aa13.26□□□□□ -0.29
ERBB3-219ENST00000551242 PPP1R9AQ9ULJ8 1098 aa13.26□□□□□ -0.29
ERBB3-219ENST00000551242 ZBTB1Q9Y2K1 713 aa13.26□□□□□ -0.29
ERBB3-219ENST00000551242 TNS2Q63HR2 1409 aa13.26□□□□□ -0.29
ERBB3-219ENST00000551242 COL1A1P02452 1464 aaPredicted RBP13.26□□□□□ -0.29
ERBB3-219ENST00000551242 PDHA1P08559 390 aa13.26□□□□□ -0.29
ERBB3-219ENST00000551242 UCHL3P15374 230 aa13.26□□□□□ -0.29
ERBB3-219ENST00000551242 RNASELQ05823 741 aaKnown RBP13.26□□□□□ -0.29
ERBB3-219ENST00000551242 NBPF20Q3BBV1 942 aa13.26□□□□□ -0.29
ERBB3-219ENST00000551242 AADACL2Q6P093 401 aa13.26□□□□□ -0.29
ERBB3-219ENST00000551242 SLFN11Q7Z7L1 901 aa13.26□□□□□ -0.29
ERBB3-219ENST00000551242 U2AF1L4Q8WU68 220 aaKnown RBP13.26□□□□□ -0.29
ERBB3-219ENST00000551242 DYNLL2Q96FJ2 89 aa13.26□□□□□ -0.29
ERBB3-219ENST00000551242 HES6Q96HZ4 224 aa13.26□□□□□ -0.29
ERBB3-219ENST00000551242 CCDC134Q9H6E4 229 aa13.26□□□□□ -0.29
ERBB3-219ENST00000551242 VAT1LQ9HCJ6 419 aa13.26□□□□□ -0.29
ERBB3-219ENST00000551242 STK17AQ9UEE5 414 aa13.26□□□□□ -0.29
ERBB3-219ENST00000551242 DLEC1Q9Y238 1755 aa13.26□□□□□ -0.29
ERBB3-219ENST00000551242 SLC37A4O43826 429 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms