RNA–Protein interactions for RNA: ENST00000550974.1

GPN3-208, Transcript of GPN-loop GTPase 3, humanhuman

TSL 5

Gene GPN3, Length 564 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-208ENST00000550974 PPM1AP35813 382 aa13.15□□□□□ -0.3
GPN3-208ENST00000550974 STARD6P59095 220 aa13.15□□□□□ -0.3
GPN3-208ENST00000550974 PPARAQ07869 468 aa13.15□□□□□ -0.3
GPN3-208ENST00000550974 BMS1Q14692 1282 aaKnown RBP13.15□□□□□ -0.3
GPN3-208ENST00000550974 CSRP2Q16527 193 aa13.15□□□□□ -0.3
GPN3-208ENST00000550974 TMEM266Q2M3C6 531 aa13.15□□□□□ -0.3
GPN3-208ENST00000550974 IER5Q5VY09 327 aa13.15□□□□□ -0.3
GPN3-208ENST00000550974 DIEXFQ68CQ4 756 aaKnown RBP13.15□□□□□ -0.3
GPN3-208ENST00000550974 LAIR1Q6GTX8 287 aa13.15□□□□□ -0.3
GPN3-208ENST00000550974 TMEM57Q8N5G2 664 aa13.15□□□□□ -0.3
GPN3-208ENST00000550974 NELL1Q92832 810 aa13.15□□□□□ -0.3
GPN3-208ENST00000550974 OSBP2Q969R2 916 aa13.15□□□□□ -0.3
GPN3-208ENST00000550974 SHDQ96IW2 340 aa13.15□□□□□ -0.3
GPN3-208ENST00000550974 MAF1Q9H063 256 aa13.15□□□□□ -0.3
GPN3-208ENST00000550974 SPG21Q9NZD8 308 aa13.15□□□□□ -0.3
GPN3-208ENST00000550974 SQORQ9Y6N5 450 aa13.15□□□□□ -0.3
GPN3-208ENST00000550974 FRYQ5TBA9 3013 aa13.15□□□□□ -0.3
GPN3-208ENST00000550974 CACNA1IQ9P0X4 2223 aa13.15□□□□□ -0.31
GPN3-208ENST00000550974 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.14□□□□□ -0.31
GPN3-208ENST00000550974 KANSL1LA0AUZ9 987 aa13.14□□□□□ -0.31
GPN3-208ENST00000550974 CYSRT1A8MQ03 144 aa13.14□□□□□ -0.31
GPN3-208ENST00000550974 PATL2C9JE40 543 aaKnown RBP13.14□□□□□ -0.31
GPN3-208ENST00000550974 M0QZ92 97 aa13.14□□□□□ -0.31
GPN3-208ENST00000550974 MGEA5O60502 916 aa13.14□□□□□ -0.31
GPN3-208ENST00000550974 RANBP6O60518 1105 aaKnown RBP13.14□□□□□ -0.31
GPN3-208ENST00000550974 LRP3O75074 770 aa13.14□□□□□ -0.31
GPN3-208ENST00000550974 CFBP00751 764 aa13.14□□□□□ -0.31
GPN3-208ENST00000550974 RETP07949 1114 aa13.14□□□□□ -0.31
GPN3-208ENST00000550974 PDHBP11177 359 aa13.14□□□□□ -0.31
GPN3-208ENST00000550974 ATP5JP18859 108 aa13.14□□□□□ -0.31
GPN3-208ENST00000550974 GNAT2P19087 354 aa13.14□□□□□ -0.31
GPN3-208ENST00000550974 RBM25P49756 843 aaKnown RBP13.14□□□□□ -0.31
GPN3-208ENST00000550974 PPFIA1Q13136 1202 aa13.14□□□□□ -0.31
GPN3-208ENST00000550974 UBXN2BQ14CS0 331 aa13.14□□□□□ -0.31
GPN3-208ENST00000550974 SOWAHCQ53LP3 525 aaPredicted RBP13.14□□□□□ -0.31
GPN3-208ENST00000550974 PRR23BQ6ZRT6 265 aa13.14□□□□□ -0.31
GPN3-208ENST00000550974 LRRC55Q6ZSA7 311 aa13.14□□□□□ -0.31
GPN3-208ENST00000550974 SLC22A17Q8WUG5 538 aa13.14□□□□□ -0.31
GPN3-208ENST00000550974 AUTS2Q8WXX7 1259 aa13.14□□□□□ -0.31
GPN3-208ENST00000550974 ZBTB10Q96DT7 871 aa13.14□□□□□ -0.31
GPN3-208ENST00000550974 TMEM47Q9BQJ4 181 aa13.14□□□□□ -0.31
GPN3-208ENST00000550974 PDCD2LQ9BRP1 358 aa13.14□□□□□ -0.31
GPN3-208ENST00000550974 MTF2Q9Y483 593 aaPredicted RBP13.14□□□□□ -0.31
GPN3-208ENST00000550974 TELO2Q9Y4R8 837 aa13.14□□□□□ -0.31
GPN3-208ENST00000550974 TRPV2Q9Y5S1 764 aa13.14□□□□□ -0.31
GPN3-208ENST00000550974 DENND3A2RUS2 1198 aa13.13□□□□□ -0.31
GPN3-208ENST00000550974 TMEM8BA6NDV4 472 aa13.13□□□□□ -0.31
GPN3-208ENST00000550974 FAM170BA6NMN3 283 aa13.13□□□□□ -0.31
GPN3-208ENST00000550974 TOP1P11387 765 aaKnown RBP13.13□□□□□ -0.31
GPN3-208ENST00000550974 NOVP48745 357 aa13.13□□□□□ -0.31
GPN3-208ENST00000550974 IGBP1P78318 339 aa13.13□□□□□ -0.31
GPN3-208ENST00000550974 SP4Q02446 784 aa13.13□□□□□ -0.31
GPN3-208ENST00000550974 ZNF543Q08ER8 600 aa13.13□□□□□ -0.31
GPN3-208ENST00000550974 SNW1Q13573 536 aaKnown RBP13.13□□□□□ -0.31
GPN3-208ENST00000550974 GRIK4Q16099 956 aa13.13□□□□□ -0.31
GPN3-208ENST00000550974 CYFIP1Q7L576 1253 aa13.13□□□□□ -0.31
GPN3-208ENST00000550974 ST13P5Q8NFI4 369 aaPredicted RBP13.13□□□□□ -0.31
GPN3-208ENST00000550974 NXPE3Q969Y0 559 aa13.13□□□□□ -0.31
GPN3-208ENST00000550974 KIF12Q96FN5 646 aa13.13□□□□□ -0.31
GPN3-208ENST00000550974 ADAM2Q99965 735 aa13.13□□□□□ -0.31
GPN3-208ENST00000550974 MYL10Q9BUA6 226 aa13.13□□□□□ -0.31
GPN3-208ENST00000550974 NACAP1Q9BZK3 213 aa13.13□□□□□ -0.31
GPN3-208ENST00000550974 CPVLQ9H3G5 476 aa13.13□□□□□ -0.31
GPN3-208ENST00000550974 ATP6V0A4Q9HBG4 840 aa13.13□□□□□ -0.31
GPN3-208ENST00000550974 IGSF9BQ9UPX0 1349 aa13.13□□□□□ -0.31
GPN3-208ENST00000550974 FNDC1Q4ZHG4 1894 aaPredicted RBP13.12□□□□□ -0.31
GPN3-208ENST00000550974 SPINK2P20155 84 aa13.12□□□□□ -0.31
GPN3-208ENST00000550974 MARK3P27448 753 aa13.12□□□□□ -0.31
GPN3-208ENST00000550974 CDC37Q16543 378 aaPredicted RBP13.12□□□□□ -0.31
GPN3-208ENST00000550974 HSP90AB4PQ58FF6 505 aa13.12□□□□□ -0.31
GPN3-208ENST00000550974 METTL7BQ6UX53 244 aa13.12□□□□□ -0.31
GPN3-208ENST00000550974 SLC24A5Q71RS6 500 aa13.12□□□□□ -0.31
GPN3-208ENST00000550974 VSIG10LQ86VR7 867 aa13.12□□□□□ -0.31
GPN3-208ENST00000550974 IL31RAQ8NI17 732 aa13.12□□□□□ -0.31
GPN3-208ENST00000550974 APPBP2Q92624 585 aa13.12□□□□□ -0.31
GPN3-208ENST00000550974 MAP4K1Q92918 833 aa13.12□□□□□ -0.31
GPN3-208ENST00000550974 UBA5Q9GZZ9 404 aa13.12□□□□□ -0.31
GPN3-208ENST00000550974 SLC2A4RGQ9NR83 387 aa13.12□□□□□ -0.31
GPN3-208ENST00000550974 C1orf112Q9NSG2 853 aa13.12□□□□□ -0.31
GPN3-208ENST00000550974 EPS15L1Q9UBC2 864 aa13.12□□□□□ -0.31
GPN3-208ENST00000550974 MBLAC1A4D2B0 266 aaPredicted RBP13.11□□□□□ -0.31
GPN3-208ENST00000550974 TM4SF5O14894 197 aa13.11□□□□□ -0.31
GPN3-208ENST00000550974 GOLGA8HP0CJ92 632 aa13.11□□□□□ -0.31
GPN3-208ENST00000550974 CTDSPL2Q05D32 466 aa13.11□□□□□ -0.31
GPN3-208ENST00000550974 FOXC1Q12948 553 aa13.11□□□□□ -0.31
GPN3-208ENST00000550974 PGM5Q15124 567 aa13.11□□□□□ -0.31
GPN3-208ENST00000550974 AASDHQ4L235 1098 aaPredicted RBP13.11□□□□□ -0.31
GPN3-208ENST00000550974 MARCH8Q5T0T0 291 aa13.11□□□□□ -0.31
GPN3-208ENST00000550974 SLC39A11Q8N1S5 342 aa13.11□□□□□ -0.31
GPN3-208ENST00000550974 CELF5Q8N6W0 485 aaKnown RBP13.11□□□□□ -0.31
GPN3-208ENST00000550974 BBXQ8WY36 941 aaPredicted RBP13.11□□□□□ -0.31
GPN3-208ENST00000550974 ZCCHC14Q8WYQ9 949 aaKnown RBP13.11□□□□□ -0.31
GPN3-208ENST00000550974 MYADMQ96S97 322 aa13.11□□□□□ -0.31
GPN3-208ENST00000550974 TMEM121BQ9BXQ6 578 aaPredicted RBP13.11□□□□□ -0.31
GPN3-208ENST00000550974 CELF4Q9BZC1 486 aaKnown RBP13.11□□□□□ -0.31
GPN3-208ENST00000550974 NAPBQ9H115 298 aa13.11□□□□□ -0.31
GPN3-208ENST00000550974 RGS18Q9NS28 235 aa13.11□□□□□ -0.31
GPN3-208ENST00000550974 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.11□□□□□ -0.31
GPN3-208ENST00000550974 MRPL11Q9Y3B7 192 aaKnown RBP13.11□□□□□ -0.31
GPN3-208ENST00000550974 C9IYK1 514 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms