RNA–Protein interactions for RNA: ENST00000550716.1

ATP2B1-207, Transcript of ATPase plasma membrane Ca2+ transporting 1, humanhuman

TSL 1 (best)

Gene ATP2B1, Length 486 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1-207ENST00000550716 PCDHA1Q9Y5I3 950 aa10.1□□□□□ -0.79
ATP2B1-207ENST00000550716 MEN1O00255 615 aa10.09□□□□□ -0.79
ATP2B1-207ENST00000550716 CYP21A2P08686 494 aa10.09□□□□□ -0.79
ATP2B1-207ENST00000550716 HOXC8P31273 242 aa10.09□□□□□ -0.79
ATP2B1-207ENST00000550716 ERVK-21P61565 698 aa10.09□□□□□ -0.79
ATP2B1-207ENST00000550716 MRPS9P82933 396 aaKnown RBP10.09□□□□□ -0.79
ATP2B1-207ENST00000550716 COL9A3Q14050 684 aaPredicted RBP10.09□□□□□ -0.79
ATP2B1-207ENST00000550716 GRM4Q14833 912 aa10.09□□□□□ -0.79
ATP2B1-207ENST00000550716 SERINC5Q86VE9 423 aa10.09□□□□□ -0.79
ATP2B1-207ENST00000550716 FCHSD1Q86WN1 690 aa10.09□□□□□ -0.79
ATP2B1-207ENST00000550716 TRIM50Q86XT4 487 aa10.09□□□□□ -0.79
ATP2B1-207ENST00000550716 DBF4BQ8NFT6 615 aa10.09□□□□□ -0.79
ATP2B1-207ENST00000550716 PIBF1Q8WXW3 757 aa10.09□□□□□ -0.79
ATP2B1-207ENST00000550716 RAD9AQ99638 391 aa10.09□□□□□ -0.79
ATP2B1-207ENST00000550716 KIAA1217Q5T5P2 1943 aa10.08□□□□□ -0.8
ATP2B1-207ENST00000550716 ABHD14A-ACY1A0A1B0GW23 586 aa10.08□□□□□ -0.8
ATP2B1-207ENST00000550716 HIP1O00291 1037 aa10.08□□□□□ -0.8
ATP2B1-207ENST00000550716 TREHO43280 583 aa10.08□□□□□ -0.8
ATP2B1-207ENST00000550716 LGR5O75473 907 aa10.08□□□□□ -0.8
ATP2B1-207ENST00000550716 LGALS2P05162 132 aa10.08□□□□□ -0.8
ATP2B1-207ENST00000550716 CTSHP09668 335 aa10.08□□□□□ -0.8
ATP2B1-207ENST00000550716 SMIM10L2AP0DMW4 78 aa10.08□□□□□ -0.8
ATP2B1-207ENST00000550716 SMIM10L2BP0DMW5 78 aa10.08□□□□□ -0.8
ATP2B1-207ENST00000550716 THPOP40225 353 aa10.08□□□□□ -0.8
ATP2B1-207ENST00000550716 NT5C2P49902 561 aa10.08□□□□□ -0.8
ATP2B1-207ENST00000550716 ANTXR2P58335 489 aa10.08□□□□□ -0.8
ATP2B1-207ENST00000550716 AAK1Q2M2I8 961 aa10.08□□□□□ -0.8
ATP2B1-207ENST00000550716 OXLD1Q5BKU9 147 aa10.08□□□□□ -0.8
ATP2B1-207ENST00000550716 LCE2AQ5TA79 106 aaPredicted RBP10.08□□□□□ -0.8
ATP2B1-207ENST00000550716 TGS1Q96RS0 853 aaKnown RBP10.08□□□□□ -0.8
ATP2B1-207ENST00000550716 KATNAL1Q9BW62 490 aa10.08□□□□□ -0.8
ATP2B1-207ENST00000550716 RIOX1Q9H6W3 641 aa10.08□□□□□ -0.8
ATP2B1-207ENST00000550716 CNNM2Q9H8M5 875 aa10.08□□□□□ -0.8
ATP2B1-207ENST00000550716 C11orf16Q9NQ32 467 aa10.08□□□□□ -0.8
ATP2B1-207ENST00000550716 CTNNA3Q9UI47 895 aa10.08□□□□□ -0.8
ATP2B1-207ENST00000550716 COG5Q9UP83 839 aa10.08□□□□□ -0.8
ATP2B1-207ENST00000550716 TRIP12Q14669 1992 aaPredicted RBP10.08□□□□□ -0.8
ATP2B1-207ENST00000550716 FRMPD4Q14CM0 1322 aa10.07□□□□□ -0.8
ATP2B1-207ENST00000550716 FAM86C2PA6NEL3 165 aa10.07□□□□□ -0.8
ATP2B1-207ENST00000550716 RSPH10B2B2RC85 870 aa10.07□□□□□ -0.8
ATP2B1-207ENST00000550716 H3BM21 787 aa10.07□□□□□ -0.8
ATP2B1-207ENST00000550716 GCOM1H8Y6P7 765 aaPredicted RBP10.07□□□□□ -0.8
ATP2B1-207ENST00000550716 PPFIA4O75335 1185 aa10.07□□□□□ -0.8
ATP2B1-207ENST00000550716 RSPH10BP0C881 870 aa10.07□□□□□ -0.8
ATP2B1-207ENST00000550716 POLR2MP0CAP2 368 aa10.07□□□□□ -0.8
ATP2B1-207ENST00000550716 CCND2P30279 289 aa10.07□□□□□ -0.8
ATP2B1-207ENST00000550716 TROAPQ12815 778 aa10.07□□□□□ -0.8
ATP2B1-207ENST00000550716 IKBKEQ14164 716 aa10.07□□□□□ -0.8
ATP2B1-207ENST00000550716 LCE2CQ5TA81 110 aa10.07□□□□□ -0.8
ATP2B1-207ENST00000550716 TTC22Q5TAA0 569 aa10.07□□□□□ -0.8
ATP2B1-207ENST00000550716 NPAS3Q8IXF0 933 aa10.07□□□□□ -0.8
ATP2B1-207ENST00000550716 MYOCDQ8IZQ8 938 aa10.07□□□□□ -0.8
ATP2B1-207ENST00000550716 PHTF2Q8N3S3 785 aa10.07□□□□□ -0.8
ATP2B1-207ENST00000550716 MYL10Q9BUA6 226 aa10.07□□□□□ -0.8
ATP2B1-207ENST00000550716 UBE2ZQ9H832 354 aaPredicted RBP10.07□□□□□ -0.8
ATP2B1-207ENST00000550716 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.06□□□□□ -0.8
ATP2B1-207ENST00000550716 C17orf102A2RUQ5 167 aa10.06□□□□□ -0.8
ATP2B1-207ENST00000550716 POM121CA8CG34 1229 aa10.06□□□□□ -0.8
ATP2B1-207ENST00000550716 H3BRB1 525 aa10.06□□□□□ -0.8
ATP2B1-207ENST00000550716 IFIT3O14879 490 aaKnown RBP10.06□□□□□ -0.8
ATP2B1-207ENST00000550716 TRAK2O60296 914 aa10.06□□□□□ -0.8
ATP2B1-207ENST00000550716 PARNO95453 639 aaKnown RBP10.06□□□□□ -0.8
ATP2B1-207ENST00000550716 PLA2G5P39877 138 aa10.06□□□□□ -0.8
ATP2B1-207ENST00000550716 HTRA4P83105 476 aaPredicted RBP10.06□□□□□ -0.8
ATP2B1-207ENST00000550716 TSGA10IPQ3SY00 556 aa10.06□□□□□ -0.8
ATP2B1-207ENST00000550716 PLEKHG4Q58EX7 1191 aa10.06□□□□□ -0.8
ATP2B1-207ENST00000550716 CYFIP1Q7L576 1253 aa10.06□□□□□ -0.8
ATP2B1-207ENST00000550716 ATP6V0A1Q93050 837 aa10.06□□□□□ -0.8
ATP2B1-207ENST00000550716 INPP4AQ96PE3 977 aaPredicted RBP10.06□□□□□ -0.8
ATP2B1-207ENST00000550716 GPR20Q99678 358 aa10.06□□□□□ -0.8
ATP2B1-207ENST00000550716 LRFN3Q9BTN0 628 aa10.06□□□□□ -0.8
ATP2B1-207ENST00000550716 RNPEPQ9H4A4 650 aa10.06□□□□□ -0.8
ATP2B1-207ENST00000550716 TUT1Q9H6E5 874 aaKnown RBP10.06□□□□□ -0.8
ATP2B1-207ENST00000550716 MLXIPQ9HAP2 919 aa10.06□□□□□ -0.8
ATP2B1-207ENST00000550716 RAB6BQ9NRW1 208 aa10.06□□□□□ -0.8
ATP2B1-207ENST00000550716 SETD4Q9NVD3 440 aa10.06□□□□□ -0.8
ATP2B1-207ENST00000550716 RTEL1Q9NZ71 1219 aa10.06□□□□□ -0.8
ATP2B1-207ENST00000550716 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.05□□□□□ -0.8
ATP2B1-207ENST00000550716 PNMA6FA0A0J9YX94 578 aa10.05□□□□□ -0.8
ATP2B1-207ENST00000550716 A0A1W2PRU2 124 aa10.05□□□□□ -0.8
ATP2B1-207ENST00000550716 SPATA31C2B4DYI2 1134 aa10.05□□□□□ -0.8
ATP2B1-207ENST00000550716 E7EWF7 191 aa10.05□□□□□ -0.8
ATP2B1-207ENST00000550716 IL9P15248 144 aa10.05□□□□□ -0.8
ATP2B1-207ENST00000550716 KCNA5P22460 613 aa10.05□□□□□ -0.8
ATP2B1-207ENST00000550716 CHMLP26374 656 aa10.05□□□□□ -0.8
ATP2B1-207ENST00000550716 ICAM3P32942 547 aa10.05□□□□□ -0.8
ATP2B1-207ENST00000550716 SP4Q02446 784 aa10.05□□□□□ -0.8
ATP2B1-207ENST00000550716 PTSQ03393 145 aa10.05□□□□□ -0.8
ATP2B1-207ENST00000550716 UTP14CQ5TAP6 766 aaKnown RBP10.05□□□□□ -0.8
ATP2B1-207ENST00000550716 USP17L6PQ6QN14 398 aa10.05□□□□□ -0.8
ATP2B1-207ENST00000550716 RUFY4Q6ZNE9 571 aa10.05□□□□□ -0.8
ATP2B1-207ENST00000550716 MB21D2Q8IYB1 491 aaPredicted RBP10.05□□□□□ -0.8
ATP2B1-207ENST00000550716 PLPP7Q8NBV4 271 aa10.05□□□□□ -0.8
ATP2B1-207ENST00000550716 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.05□□□□□ -0.8
ATP2B1-207ENST00000550716 LMBR1Q8WVP7 490 aa10.05□□□□□ -0.8
ATP2B1-207ENST00000550716 C1QTNF1Q9BXJ1 281 aa10.05□□□□□ -0.8
ATP2B1-207ENST00000550716 MAP3K20Q9NYL2 800 aaKnown RBP10.05□□□□□ -0.8
ATP2B1-207ENST00000550716 LMCD1Q9NZU5 365 aa10.05□□□□□ -0.8
ATP2B1-207ENST00000550716 PIK3CDO00329 1044 aa10.04□□□□□ -0.8
ATP2B1-207ENST00000550716 EFCAB14O75071 495 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms