RNA–Protein interactions for RNA: ENST00000550228.5

GPN3-207, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 353 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-207ENST00000550228 RINT1Q6NUQ1 792 aa9.06□□□□□ -0.96
GPN3-207ENST00000550228 PADI6Q6TGC4 694 aa9.06□□□□□ -0.96
GPN3-207ENST00000550228 ANO5Q75V66 913 aa9.06□□□□□ -0.96
GPN3-207ENST00000550228 MAEAQ7L5Y9 396 aa9.06□□□□□ -0.96
GPN3-207ENST00000550228 OTUD6AQ7L8S5 288 aa9.06□□□□□ -0.96
GPN3-207ENST00000550228 PLPPR4Q7Z2D5 763 aa9.06□□□□□ -0.96
GPN3-207ENST00000550228 KCTD17Q8N5Z5 321 aa9.06□□□□□ -0.96
GPN3-207ENST00000550228 SYT2Q8N9I0 419 aaPredicted RBP9.06□□□□□ -0.96
GPN3-207ENST00000550228 ATP8B4Q8TF62 1192 aa9.06□□□□□ -0.96
GPN3-207ENST00000550228 PPP1R13LQ8WUF5 828 aa9.06□□□□□ -0.96
GPN3-207ENST00000550228 DDX12PQ92771 950 aa9.06□□□□□ -0.96
GPN3-207ENST00000550228 C7orf25Q9BPX7 421 aa9.06□□□□□ -0.96
GPN3-207ENST00000550228 C16orf70Q9BSU1 422 aa9.06□□□□□ -0.96
GPN3-207ENST00000550228 TRIM9Q9C026 710 aa9.06□□□□□ -0.96
GPN3-207ENST00000550228 LRRC27Q9C0I9 530 aa9.06□□□□□ -0.96
GPN3-207ENST00000550228 ZHX3Q9H4I2 956 aa9.06□□□□□ -0.96
GPN3-207ENST00000550228 POLD4Q9HCU8 107 aa9.06□□□□□ -0.96
GPN3-207ENST00000550228 NRBP2Q9NSY0 501 aa9.06□□□□□ -0.96
GPN3-207ENST00000550228 ERAP1Q9NZ08 941 aa9.06□□□□□ -0.96
GPN3-207ENST00000550228 KIAA1468Q9P260 1216 aa9.06□□□□□ -0.96
GPN3-207ENST00000550228 DBR1Q9UK59 544 aaKnown RBP9.06□□□□□ -0.96
GPN3-207ENST00000550228 ZNF215Q9UL58 517 aaPredicted RBP9.06□□□□□ -0.96
GPN3-207ENST00000550228 PCDHA5Q9Y5H7 936 aa9.06□□□□□ -0.96
GPN3-207ENST00000550228 H3BRB1 525 aa9.05□□□□□ -0.96
GPN3-207ENST00000550228 ZEB2O60315 1214 aa9.05□□□□□ -0.96
GPN3-207ENST00000550228 ADAMTS4O75173 837 aa9.05□□□□□ -0.96
GPN3-207ENST00000550228 TBCAO75347 108 aaKnown RBP9.05□□□□□ -0.96
GPN3-207ENST00000550228 LETM1O95202 739 aaPredicted RBP9.05□□□□□ -0.96
GPN3-207ENST00000550228 RPN1P04843 607 aaKnown RBP9.05□□□□□ -0.96
GPN3-207ENST00000550228 HOXD8P13378 290 aaPredicted RBP9.05□□□□□ -0.96
GPN3-207ENST00000550228 CCL5P13501 91 aa9.05□□□□□ -0.96
GPN3-207ENST00000550228 PSEN2P49810 448 aa9.05□□□□□ -0.96
GPN3-207ENST00000550228 IGBP1P78318 339 aa9.05□□□□□ -0.96
GPN3-207ENST00000550228 MFSD10Q14728 455 aa9.05□□□□□ -0.96
GPN3-207ENST00000550228 ARSHQ5FYA8 562 aa9.05□□□□□ -0.96
GPN3-207ENST00000550228 FBXO46Q6PJ61 603 aaPredicted RBP9.05□□□□□ -0.96
GPN3-207ENST00000550228 SASS6Q6UVJ0 657 aa9.05□□□□□ -0.96
GPN3-207ENST00000550228 RBM43Q6ZSC3 357 aaKnown RBP9.05□□□□□ -0.96
GPN3-207ENST00000550228 ELOA2Q8IYF1 753 aaPredicted RBP9.05□□□□□ -0.96
GPN3-207ENST00000550228 TRAPPC12Q8WVT3 735 aa9.05□□□□□ -0.96
GPN3-207ENST00000550228 BBXQ8WY36 941 aaPredicted RBP9.05□□□□□ -0.96
GPN3-207ENST00000550228 REEP2Q9BRK0 252 aa9.05□□□□□ -0.96
GPN3-207ENST00000550228 RNPEPQ9H4A4 650 aa9.05□□□□□ -0.96
GPN3-207ENST00000550228 TUT1Q9H6E5 874 aaKnown RBP9.05□□□□□ -0.96
GPN3-207ENST00000550228 CYP26B1Q9NR63 512 aa9.05□□□□□ -0.96
GPN3-207ENST00000550228 EXOC1Q9NV70 894 aa9.05□□□□□ -0.96
GPN3-207ENST00000550228 MAN1B1Q9UKM7 699 aa9.05□□□□□ -0.96
GPN3-207ENST00000550228 RSPH10B2B2RC85 870 aa9.04□□□□□ -0.96
GPN3-207ENST00000550228 KLRC4O43908 158 aa9.04□□□□□ -0.96
GPN3-207ENST00000550228 HBP1O60381 514 aa9.04□□□□□ -0.96
GPN3-207ENST00000550228 MSCO60682 206 aa9.04□□□□□ -0.96
GPN3-207ENST00000550228 HIP1RO75146 1068 aa9.04□□□□□ -0.96
GPN3-207ENST00000550228 FAM13AO94988 1023 aa9.04□□□□□ -0.96
GPN3-207ENST00000550228 MYL1P05976 194 aa9.04□□□□□ -0.96
GPN3-207ENST00000550228 RSPH10BP0C881 870 aa9.04□□□□□ -0.96
GPN3-207ENST00000550228 XRCC6P12956 609 aaKnown RBP eCLIP9.04□□□□□ -0.96
GPN3-207ENST00000550228 INSRRP14616 1297 aa9.04□□□□□ -0.96
GPN3-207ENST00000550228 SLC26A2P50443 739 aa9.04□□□□□ -0.96
GPN3-207ENST00000550228 POLGP54098 1239 aaPredicted RBP9.04□□□□□ -0.96
GPN3-207ENST00000550228 SOX10P56693 466 aa9.04□□□□□ -0.96
GPN3-207ENST00000550228 PURAQ00577 322 aaKnown RBP9.04□□□□□ -0.96
GPN3-207ENST00000550228 TYRO3Q06418 890 aa9.04□□□□□ -0.96
GPN3-207ENST00000550228 COASYQ13057 564 aa9.04□□□□□ -0.96
GPN3-207ENST00000550228 PPFIA1Q13136 1202 aa9.04□□□□□ -0.96
GPN3-207ENST00000550228 GIT2Q14161 759 aa9.04□□□□□ -0.96
GPN3-207ENST00000550228 EMC2Q15006 297 aa9.04□□□□□ -0.96
GPN3-207ENST00000550228 LRRC41Q15345 812 aa9.04□□□□□ -0.96
GPN3-207ENST00000550228 KCNA10Q16322 511 aa9.04□□□□□ -0.96
GPN3-207ENST00000550228 KIAA0753Q2KHM9 967 aa9.04□□□□□ -0.96
GPN3-207ENST00000550228 KMT5BQ4FZB7 885 aa9.04□□□□□ -0.96
GPN3-207ENST00000550228 FAM102BQ5T8I3 360 aa9.04□□□□□ -0.96
GPN3-207ENST00000550228 CXCL17Q6UXB2 119 aa9.04□□□□□ -0.96
GPN3-207ENST00000550228 C1orf186Q6ZWK4 172 aa9.04□□□□□ -0.96
GPN3-207ENST00000550228 UNC13DQ70J99 1090 aa9.04□□□□□ -0.96
GPN3-207ENST00000550228 RNF180Q86T96 592 aa9.04□□□□□ -0.96
GPN3-207ENST00000550228 CCDC65Q8IXS2 484 aa9.04□□□□□ -0.96
GPN3-207ENST00000550228 KAT2BQ92831 832 aa9.04□□□□□ -0.96
GPN3-207ENST00000550228 CCDC47Q96A33 483 aaKnown RBP9.04□□□□□ -0.96
GPN3-207ENST00000550228 DNAJC19Q96DA6 116 aa9.04□□□□□ -0.96
GPN3-207ENST00000550228 MTG1Q9BT17 334 aaPredicted RBP9.04□□□□□ -0.96
GPN3-207ENST00000550228 NIFKQ9BYG3 293 aaKnown RBP9.04□□□□□ -0.96
GPN3-207ENST00000550228 RNF208Q9H0X6 261 aa9.04□□□□□ -0.96
GPN3-207ENST00000550228 ATP6V0A4Q9HBG4 840 aa9.04□□□□□ -0.96
GPN3-207ENST00000550228 PANK4Q9NVE7 773 aa9.04□□□□□ -0.96
GPN3-207ENST00000550228 TBC1D7Q9P0N9 293 aa9.04□□□□□ -0.96
GPN3-207ENST00000550228 TUBE1Q9UJT0 475 aa9.04□□□□□ -0.96
GPN3-207ENST00000550228 EVPLQ92817 2033 aa9.04□□□□□ -0.96
GPN3-207ENST00000550228 SFI1A8K8P3 1242 aa9.03□□□□□ -0.96
GPN3-207ENST00000550228 KPNA6O60684 536 aa9.03□□□□□ -0.96
GPN3-207ENST00000550228 DGAT1O75907 488 aa9.03□□□□□ -0.96
GPN3-207ENST00000550228 F2P00734 622 aa9.03□□□□□ -0.96
GPN3-207ENST00000550228 ASGR1P07306 291 aa9.03□□□□□ -0.96
GPN3-207ENST00000550228 SMIM10L2AP0DMW4 78 aa9.03□□□□□ -0.96
GPN3-207ENST00000550228 SMIM10L2BP0DMW5 78 aa9.03□□□□□ -0.96
GPN3-207ENST00000550228 CCDC192P0DO97 292 aa9.03□□□□□ -0.96
GPN3-207ENST00000550228 CST5P28325 142 aaPredicted RBP9.03□□□□□ -0.96
GPN3-207ENST00000550228 TBC1D8BQ0IIM8 1120 aa9.03□□□□□ -0.96
GPN3-207ENST00000550228 TARBP2Q15633 366 aaKnown RBP9.03□□□□□ -0.96
GPN3-207ENST00000550228 GRIK4Q16099 956 aa9.03□□□□□ -0.96
GPN3-207ENST00000550228 STX1AQ16623 288 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms