RNA–Protein interactions for RNA: ENST00000549876.5

CCDC38-208, Transcript of coiled-coil domain containing 38, humanhuman

TSL 5

Gene CCDC38, Length 499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-208ENST00000549876 DIAPH1O60610 1272 aaKnown RBP6.56□□□□□ -1.36
CCDC38-208ENST00000549876 C6orf222P0C671 652 aaPredicted RBP6.56□□□□□ -1.36
CCDC38-208ENST00000549876 TGM1P22735 817 aa6.56□□□□□ -1.36
CCDC38-208ENST00000549876 HIBADHP31937 336 aaKnown RBP6.56□□□□□ -1.36
CCDC38-208ENST00000549876 HERVK_113P62684 666 aa6.56□□□□□ -1.36
CCDC38-208ENST00000549876 HGFACQ04756 655 aa6.56□□□□□ -1.36
CCDC38-208ENST00000549876 RBL2Q08999 1139 aa6.56□□□□□ -1.36
CCDC38-208ENST00000549876 PCOLCEQ15113 449 aa6.56□□□□□ -1.36
CCDC38-208ENST00000549876 MTERF2Q49AM1 385 aa6.56□□□□□ -1.36
CCDC38-208ENST00000549876 FAM209AQ5JX71 171 aa6.56□□□□□ -1.36
CCDC38-208ENST00000549876 KANK2Q63ZY3 851 aa6.56□□□□□ -1.36
CCDC38-208ENST00000549876 TMEM200BQ69YZ2 307 aa6.56□□□□□ -1.36
CCDC38-208ENST00000549876 C16orf59Q7L2K0 433 aa6.56□□□□□ -1.36
CCDC38-208ENST00000549876 MAMDC2Q7Z304 686 aaPredicted RBP6.56□□□□□ -1.36
CCDC38-208ENST00000549876 ZBTB38Q8NAP3 1195 aaPredicted RBP6.56□□□□□ -1.36
CCDC38-208ENST00000549876 NELFAQ9H3P2 528 aa6.56□□□□□ -1.36
CCDC38-208ENST00000549876 CATSPERZQ9NTU4 200 aa6.56□□□□□ -1.36
CCDC38-208ENST00000549876 AURKAIP1Q9NWT8 199 aaPredicted RBP6.56□□□□□ -1.36
CCDC38-208ENST00000549876 SIRPGQ9P1W8 387 aa6.56□□□□□ -1.36
CCDC38-208ENST00000549876 CEP72Q9P209 647 aa6.56□□□□□ -1.36
CCDC38-208ENST00000549876 CDC42EP3Q9UKI2 254 aa6.56□□□□□ -1.36
CCDC38-208ENST00000549876 A0A087X1B8 175 aa6.55□□□□□ -1.36
CCDC38-208ENST00000549876 ZNF561-AS1K7EIQ3 104 aa6.55□□□□□ -1.36
CCDC38-208ENST00000549876 ARVCFO00192 962 aa6.55□□□□□ -1.36
CCDC38-208ENST00000549876 FAM153BP0C7A2 387 aa6.55□□□□□ -1.36
CCDC38-208ENST00000549876 PYGMP11217 842 aa6.55□□□□□ -1.36
CCDC38-208ENST00000549876 GTF2F1P35269 517 aaKnown RBP eCLIP6.55□□□□□ -1.36
CCDC38-208ENST00000549876 JAM2P57087 298 aa6.55□□□□□ -1.36
CCDC38-208ENST00000549876 SSRP1Q08945 709 aaKnown RBP6.55□□□□□ -1.36
CCDC38-208ENST00000549876 SERINC3Q13530 473 aa6.55□□□□□ -1.36
CCDC38-208ENST00000549876 KRTAP15-1Q3LI76 137 aa6.55□□□□□ -1.36
CCDC38-208ENST00000549876 MTDHQ86UE4 582 aaKnown RBP6.55□□□□□ -1.36
CCDC38-208ENST00000549876 LARP4BQ92615 738 aaKnown RBP6.55□□□□□ -1.36
CCDC38-208ENST00000549876 PTPRN2Q92932 1015 aa6.55□□□□□ -1.36
CCDC38-208ENST00000549876 EXOC2Q96KP1 924 aa6.55□□□□□ -1.36
CCDC38-208ENST00000549876 OR10A2Q9H208 303 aa6.55□□□□□ -1.36
CCDC38-208ENST00000549876 MMRN2Q9H8L6 949 aa6.55□□□□□ -1.36
CCDC38-208ENST00000549876 PPP1R1BQ9UD71 204 aaPredicted RBP6.55□□□□□ -1.36
CCDC38-208ENST00000549876 PCDHA8Q9Y5H6 950 aa6.55□□□□□ -1.36
CCDC38-208ENST00000549876 TRBV23-1A0A0A0MS06 115 aa6.54□□□□□ -1.36
CCDC38-208ENST00000549876 A0A0G2JNJ9 132 aa6.54□□□□□ -1.36
CCDC38-208ENST00000549876 PMS2P1A4D2B8 440 aa6.54□□□□□ -1.36
CCDC38-208ENST00000549876 CLASP2O75122 1294 aaKnown RBP6.54□□□□□ -1.36
CCDC38-208ENST00000549876 MRE11P49959 708 aa6.54□□□□□ -1.36
CCDC38-208ENST00000549876 CD83Q01151 205 aa6.54□□□□□ -1.36
CCDC38-208ENST00000549876 GRM7Q14831 915 aa6.54□□□□□ -1.36
CCDC38-208ENST00000549876 LRSAM1Q6UWE0 723 aa6.54□□□□□ -1.36
CCDC38-208ENST00000549876 FILIP1Q7Z7B0 1213 aa6.54□□□□□ -1.36
CCDC38-208ENST00000549876 ADGRE4PQ86SQ3 457 aa6.54□□□□□ -1.36
CCDC38-208ENST00000549876 ZNF483Q8TF39 744 aaPredicted RBP6.54□□□□□ -1.36
CCDC38-208ENST00000549876 SMURF1Q9HCE7 757 aa6.54□□□□□ -1.36
CCDC38-208ENST00000549876 HECAQ9UBI9 543 aaPredicted RBP6.54□□□□□ -1.36
CCDC38-208ENST00000549876 Q9UFV3 132 aa6.54□□□□□ -1.36
CCDC38-208ENST00000549876 KRTAP23-1A1A580 65 aa6.53□□□□□ -1.36
CCDC38-208ENST00000549876 FAM221BA6H8Z2 402 aa6.53□□□□□ -1.36
CCDC38-208ENST00000549876 PRAMEF25A6NGN4 478 aa6.53□□□□□ -1.36
CCDC38-208ENST00000549876 KRT15P19012 456 aa6.53□□□□□ -1.36
CCDC38-208ENST00000549876 ECE1P42892 770 aa6.53□□□□□ -1.36
CCDC38-208ENST00000549876 NANOS3P60323 173 aaKnown RBP6.53□□□□□ -1.36
CCDC38-208ENST00000549876 RASA3Q14644 834 aa6.53□□□□□ -1.36
CCDC38-208ENST00000549876 SEC23AQ15436 765 aa6.53□□□□□ -1.36
CCDC38-208ENST00000549876 SPTY2D1Q68D10 685 aaPredicted RBP6.53□□□□□ -1.36
CCDC38-208ENST00000549876 PCSK4Q6UW60 755 aa6.53□□□□□ -1.36
CCDC38-208ENST00000549876 OTOP2Q7RTS6 562 aa6.53□□□□□ -1.36
CCDC38-208ENST00000549876 ARMC5Q96C12 935 aa6.53□□□□□ -1.36
CCDC38-208ENST00000549876 CDC6Q99741 560 aa6.53□□□□□ -1.36
CCDC38-208ENST00000549876 AGO3Q9H9G7 860 aaKnown RBP6.53□□□□□ -1.36
CCDC38-208ENST00000549876 ADH4P08319 380 aa6.52□□□□□ -1.37
CCDC38-208ENST00000549876 SUMO1P63165 101 aaKnown RBP6.52□□□□□ -1.37
CCDC38-208ENST00000549876 LACTBP83111 547 aaPredicted RBP6.52□□□□□ -1.37
CCDC38-208ENST00000549876 MOGSQ13724 837 aa6.52□□□□□ -1.37
CCDC38-208ENST00000549876 TMPRSS6Q8IU80 811 aa6.52□□□□□ -1.37
CCDC38-208ENST00000549876 OR14K1Q8NGZ2 314 aa6.52□□□□□ -1.37
CCDC38-208ENST00000549876 HIRIP3Q9BW71 556 aaPredicted RBP6.52□□□□□ -1.37
CCDC38-208ENST00000549876 OR10A5Q9H207 317 aa6.52□□□□□ -1.37
CCDC38-208ENST00000549876 UCKL1Q9NWZ5 548 aa6.52□□□□□ -1.37
CCDC38-208ENST00000549876 KDM2BQ8NHM5 1336 aa6.51□□□□□ -1.37
CCDC38-208ENST00000549876 KCNK3O14649 394 aa6.51□□□□□ -1.37
CCDC38-208ENST00000549876 SLC26A4O43511 780 aa6.51□□□□□ -1.37
CCDC38-208ENST00000549876 MAKP20794 623 aa6.51□□□□□ -1.37
CCDC38-208ENST00000549876 MEOX1P50221 254 aa6.51□□□□□ -1.37
CCDC38-208ENST00000549876 GUCY1A3Q02108 690 aa6.51□□□□□ -1.37
CCDC38-208ENST00000549876 CRY1Q16526 586 aa6.51□□□□□ -1.37
CCDC38-208ENST00000549876 LONRF2Q1L5Z9 754 aa6.51□□□□□ -1.37
CCDC38-208ENST00000549876 EP400NLQ6ZTU2 488 aa6.51□□□□□ -1.37
CCDC38-208ENST00000549876 ZNF627Q7L945 461 aa6.51□□□□□ -1.37
CCDC38-208ENST00000549876 LRP10Q7Z4F1 713 aa6.51□□□□□ -1.37
CCDC38-208ENST00000549876 SGMS1Q86VZ5 419 aa6.51□□□□□ -1.37
CCDC38-208ENST00000549876 RTKN2Q8IZC4 609 aa6.51□□□□□ -1.37
CCDC38-208ENST00000549876 SHCBP1Q8NEM2 672 aa6.51□□□□□ -1.37
CCDC38-208ENST00000549876 DHRS4Q9BTZ2 278 aa6.51□□□□□ -1.37
CCDC38-208ENST00000549876 GIT1Q9Y2X7 761 aa6.51□□□□□ -1.37
CCDC38-208ENST00000549876 CCDC66A2RUB6 948 aa6.5□□□□□ -1.37
CCDC38-208ENST00000549876 SRGAP2CP0DJJ0 459 aa6.5□□□□□ -1.37
CCDC38-208ENST00000549876 ST5P78524 1137 aa6.5□□□□□ -1.37
CCDC38-208ENST00000549876 HHEXQ03014 270 aa6.5□□□□□ -1.37
CCDC38-208ENST00000549876 D2HGDHQ8N465 521 aa6.5□□□□□ -1.37
CCDC38-208ENST00000549876 DEPDC7Q96QD5 511 aa6.5□□□□□ -1.37
CCDC38-208ENST00000549876 AGAP2Q99490 1192 aa6.5□□□□□ -1.37
CCDC38-208ENST00000549876 SNTG2Q9NY99 539 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms