RNA–Protein interactions for RNA: ENST00000549490.1

UBE2N-203, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

TSL 2

Gene UBE2N, Length 676 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-203ENST00000549490 RGS18Q9NS28 235 aa10.28□□□□□ -0.76
UBE2N-203ENST00000549490 USTQ9Y2C2 406 aa10.28□□□□□ -0.76
UBE2N-203ENST00000549490 CHD8Q9HCK8 2581 aa10.28□□□□□ -0.76
UBE2N-203ENST00000549490 KDM3AQ9Y4C1 1321 aa10.28□□□□□ -0.76
UBE2N-203ENST00000549490 OTOGLQ3ZCN5 2332 aa10.28□□□□□ -0.76
UBE2N-203ENST00000549490 SPTBN2O15020 2390 aa10.28□□□□□ -0.76
UBE2N-203ENST00000549490 GPR179Q6PRD1 2367 aa10.28□□□□□ -0.76
UBE2N-203ENST00000549490 PLXNA4Q9HCM2 1894 aa10.27□□□□□ -0.76
UBE2N-203ENST00000549490 PALM3A6NDB9 673 aaPredicted RBP10.27□□□□□ -0.77
UBE2N-203ENST00000549490 C2orf71A6NGG8 1288 aa10.27□□□□□ -0.77
UBE2N-203ENST00000549490 C9IYK1 514 aa10.27□□□□□ -0.77
UBE2N-203ENST00000549490 CLASP2O75122 1294 aaKnown RBP10.27□□□□□ -0.77
UBE2N-203ENST00000549490 EOMESO95936 686 aa10.27□□□□□ -0.77
UBE2N-203ENST00000549490 KCNA2P16389 499 aa10.27□□□□□ -0.77
UBE2N-203ENST00000549490 PDE4AP27815 886 aa10.27□□□□□ -0.77
UBE2N-203ENST00000549490 PBX3P40426 434 aa10.27□□□□□ -0.77
UBE2N-203ENST00000549490 KRT76Q01546 638 aa10.27□□□□□ -0.77
UBE2N-203ENST00000549490 RARS2Q5T160 578 aaKnown RBP10.27□□□□□ -0.77
UBE2N-203ENST00000549490 PCNX4Q63HM2 1172 aa10.27□□□□□ -0.77
UBE2N-203ENST00000549490 KIAA1841Q6NSI8 718 aa10.27□□□□□ -0.77
UBE2N-203ENST00000549490 XRRA1Q6P2D8 792 aa10.27□□□□□ -0.77
UBE2N-203ENST00000549490 KCNT2Q6UVM3 1135 aa10.27□□□□□ -0.77
UBE2N-203ENST00000549490 LRRC55Q6ZSA7 311 aa10.27□□□□□ -0.77
UBE2N-203ENST00000549490 SLC24A5Q71RS6 500 aa10.27□□□□□ -0.77
UBE2N-203ENST00000549490 NLRX1Q86UT6 975 aa10.27□□□□□ -0.77
UBE2N-203ENST00000549490 CYP2W1Q8TAV3 490 aa10.27□□□□□ -0.77
UBE2N-203ENST00000549490 TRAPPC12Q8WVT3 735 aa10.27□□□□□ -0.77
UBE2N-203ENST00000549490 PCYT2Q99447 389 aa10.27□□□□□ -0.77
UBE2N-203ENST00000549490 RIOX1Q9H6W3 641 aa10.27□□□□□ -0.77
UBE2N-203ENST00000549490 CDHR5Q9HBB8 845 aa10.27□□□□□ -0.77
UBE2N-203ENST00000549490 C1orf112Q9NSG2 853 aa10.27□□□□□ -0.77
UBE2N-203ENST00000549490 RNF216Q9NWF9 866 aaPredicted RBP10.27□□□□□ -0.77
UBE2N-203ENST00000549490 NOC2LQ9Y3T9 749 aaKnown RBP10.27□□□□□ -0.77
UBE2N-203ENST00000549490 PCDHA2Q9Y5H9 948 aa10.27□□□□□ -0.77
UBE2N-203ENST00000549490 KIAA1671Q9BY89 1806 aa10.27□□□□□ -0.77
UBE2N-203ENST00000549490 SMIM35A0A1B0GVV1 85 aa10.26□□□□□ -0.77
UBE2N-203ENST00000549490 DENND3A2RUS2 1198 aa10.26□□□□□ -0.77
UBE2N-203ENST00000549490 CYTH3O43739 400 aa10.26□□□□□ -0.77
UBE2N-203ENST00000549490 FAM189BP81408 668 aa10.26□□□□□ -0.77
UBE2N-203ENST00000549490 KRT17Q04695 432 aa10.26□□□□□ -0.77
UBE2N-203ENST00000549490 TDGQ13569 410 aa10.26□□□□□ -0.77
UBE2N-203ENST00000549490 RSPO4Q2I0M5 234 aaPredicted RBP10.26□□□□□ -0.77
UBE2N-203ENST00000549490 ATAT1Q5SQI0 421 aa10.26□□□□□ -0.77
UBE2N-203ENST00000549490 IFIT1BQ5T764 474 aaKnown RBP10.26□□□□□ -0.77
UBE2N-203ENST00000549490 FAM43BQ6ZT52 329 aaPredicted RBP10.26□□□□□ -0.77
UBE2N-203ENST00000549490 SIX5Q8N196 739 aa10.26□□□□□ -0.77
UBE2N-203ENST00000549490 NME8Q8N427 588 aa10.26□□□□□ -0.77
UBE2N-203ENST00000549490 DCLK2Q8N568 766 aa10.26□□□□□ -0.77
UBE2N-203ENST00000549490 FEZF2Q8TBJ5 459 aa10.26□□□□□ -0.77
UBE2N-203ENST00000549490 RUBCNQ92622 972 aa10.26□□□□□ -0.77
UBE2N-203ENST00000549490 ZNF558Q96NG5 402 aa10.26□□□□□ -0.77
UBE2N-203ENST00000549490 ATP6V0A4Q9HBG4 840 aa10.26□□□□□ -0.77
UBE2N-203ENST00000549490 CYP26B1Q9NR63 512 aa10.26□□□□□ -0.77
UBE2N-203ENST00000549490 DBR1Q9UK59 544 aaKnown RBP10.26□□□□□ -0.77
UBE2N-203ENST00000549490 FBXL21Q9UKT6 434 aa10.26□□□□□ -0.77
UBE2N-203ENST00000549490 MYO10Q9HD67 2058 aa10.26□□□□□ -0.77
UBE2N-203ENST00000549490 PNMA6FA0A0J9YX94 578 aa10.25□□□□□ -0.77
UBE2N-203ENST00000549490 RPS6KA5O75582 802 aa10.25□□□□□ -0.77
UBE2N-203ENST00000549490 ITGB5P18084 799 aa10.25□□□□□ -0.77
UBE2N-203ENST00000549490 PPM1AP35813 382 aa10.25□□□□□ -0.77
UBE2N-203ENST00000549490 SMC1AQ14683 1233 aaKnown RBP10.25□□□□□ -0.77
UBE2N-203ENST00000549490 PLCB4Q15147 1175 aa10.25□□□□□ -0.77
UBE2N-203ENST00000549490 SEC23AQ15436 765 aa10.25□□□□□ -0.77
UBE2N-203ENST00000549490 USP17L6PQ6QN14 398 aa10.25□□□□□ -0.77
UBE2N-203ENST00000549490 TICAM2Q86XR7 235 aa10.25□□□□□ -0.77
UBE2N-203ENST00000549490 TMEM40Q8WWA1 233 aa10.25□□□□□ -0.77
UBE2N-203ENST00000549490 RIN2Q8WYP3 895 aaPredicted RBP10.25□□□□□ -0.77
UBE2N-203ENST00000549490 GPRASP2Q96D09 838 aa10.25□□□□□ -0.77
UBE2N-203ENST00000549490 CASD1Q96PB1 797 aa10.25□□□□□ -0.77
UBE2N-203ENST00000549490 HINFPQ9BQA5 517 aa10.25□□□□□ -0.77
UBE2N-203ENST00000549490 UBAC1Q9BSL1 405 aa10.25□□□□□ -0.77
UBE2N-203ENST00000549490 TMEM117Q9H0C3 514 aa10.25□□□□□ -0.77
UBE2N-203ENST00000549490 RNF19AQ9NV58 838 aa10.25□□□□□ -0.77
UBE2N-203ENST00000549490 TMEM161AQ9NX61 479 aa10.25□□□□□ -0.77
UBE2N-203ENST00000549490 SPG21Q9NZD8 308 aa10.25□□□□□ -0.77
UBE2N-203ENST00000549490 PKD2L1Q9P0L9 805 aa10.25□□□□□ -0.77
UBE2N-203ENST00000549490 DUSP12Q9UNI6 340 aa10.25□□□□□ -0.77
UBE2N-203ENST00000549490 ST3GAL5Q9UNP4 418 aa10.25□□□□□ -0.77
UBE2N-203ENST00000549490 GINS2Q9Y248 185 aa10.25□□□□□ -0.77
UBE2N-203ENST00000549490 CFAP47Q6ZTR5 3102 aa10.24□□□□□ -0.77
UBE2N-203ENST00000549490 CXCL14O95715 111 aa10.24□□□□□ -0.77
UBE2N-203ENST00000549490 GRM4Q14833 912 aa10.24□□□□□ -0.77
UBE2N-203ENST00000549490 MTHFD1LQ6UB35 978 aa10.24□□□□□ -0.77
UBE2N-203ENST00000549490 SLC39A11Q8N1S5 342 aa10.24□□□□□ -0.77
UBE2N-203ENST00000549490 SMARCC2Q8TAQ2 1214 aa10.24□□□□□ -0.77
UBE2N-203ENST00000549490 ACSF2Q96CM8 615 aaPredicted RBP10.24□□□□□ -0.77
UBE2N-203ENST00000549490 CDHR1Q96JP9 859 aa10.24□□□□□ -0.77
UBE2N-203ENST00000549490 ELAC1Q9H777 363 aaKnown RBP10.24□□□□□ -0.77
UBE2N-203ENST00000549490 KCNK12Q9HB15 430 aa10.24□□□□□ -0.77
UBE2N-203ENST00000549490 DZANK1Q9NVP4 752 aa10.24□□□□□ -0.77
UBE2N-203ENST00000549490 KRBA1A5PL33 1030 aa10.23□□□□□ -0.77
UBE2N-203ENST00000549490 STK25O00506 426 aa10.23□□□□□ -0.77
UBE2N-203ENST00000549490 MEIS2O14770 477 aa10.23□□□□□ -0.77
UBE2N-203ENST00000549490 GPR182O15218 404 aa10.23□□□□□ -0.77
UBE2N-203ENST00000549490 NARSO43776 548 aaKnown RBP10.23□□□□□ -0.77
UBE2N-203ENST00000549490 EPCAMP16422 314 aa10.23□□□□□ -0.77
UBE2N-203ENST00000549490 KLRC1P26715 233 aa10.23□□□□□ -0.77
UBE2N-203ENST00000549490 PDE1AP54750 535 aa10.23□□□□□ -0.77
UBE2N-203ENST00000549490 MFAP1P55081 439 aaKnown RBP10.23□□□□□ -0.77
UBE2N-203ENST00000549490 DSC3Q14574 896 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms