RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 GRB10Q13322 594 aa12.16□□□□□ -0.46
LINC00661-204ENST00000549354 ECM1Q16610 540 aa12.16□□□□□ -0.46
LINC00661-204ENST00000549354 Q4G0T1 1027 aa12.16□□□□□ -0.46
LINC00661-204ENST00000549354 MIGA2Q7L4E1 593 aa12.16□□□□□ -0.46
LINC00661-204ENST00000549354 MICALL2Q8IY33 904 aa12.16□□□□□ -0.46
LINC00661-204ENST00000549354 EHBP1Q8NDI1 1231 aa12.16□□□□□ -0.46
LINC00661-204ENST00000549354 CCDC43Q96MW1 224 aaKnown RBP12.16□□□□□ -0.46
LINC00661-204ENST00000549354 RAB34Q9BZG1 259 aa12.16□□□□□ -0.46
LINC00661-204ENST00000549354 NDST4Q9H3R1 872 aa12.16□□□□□ -0.46
LINC00661-204ENST00000549354 THAP9Q9H5L6 903 aa12.16□□□□□ -0.46
LINC00661-204ENST00000549354 EPB41L5Q9HCM4 733 aa12.16□□□□□ -0.46
LINC00661-204ENST00000549354 CNOT7Q9UIV1 285 aaKnown RBP12.16□□□□□ -0.46
LINC00661-204ENST00000549354 FEM1BQ9UK73 627 aa12.16□□□□□ -0.46
LINC00661-204ENST00000549354 FAM184BQ9ULE4 1060 aa12.16□□□□□ -0.46
LINC00661-204ENST00000549354 TMEM110-MUSTN1A8MSY1 372 aa12.15□□□□□ -0.46
LINC00661-204ENST00000549354 TBX3O15119 743 aa12.15□□□□□ -0.46
LINC00661-204ENST00000549354 PAFAH1B1P43034 410 aa12.15□□□□□ -0.46
LINC00661-204ENST00000549354 SEC24CP53992 1094 aa12.15□□□□□ -0.46
LINC00661-204ENST00000549354 TMEM266Q2M3C6 531 aa12.15□□□□□ -0.46
LINC00661-204ENST00000549354 TMEM119Q4V9L6 283 aa12.15□□□□□ -0.46
LINC00661-204ENST00000549354 COBLL1Q53SF7 1204 aa12.15□□□□□ -0.46
LINC00661-204ENST00000549354 ODF2Q5BJF6 829 aa12.15□□□□□ -0.46
LINC00661-204ENST00000549354 RNF187Q5TA31 235 aaPredicted RBP12.15□□□□□ -0.46
LINC00661-204ENST00000549354 PHLDB2Q86SQ0 1253 aa12.15□□□□□ -0.46
LINC00661-204ENST00000549354 PNMA5Q96PV4 448 aa12.15□□□□□ -0.46
LINC00661-204ENST00000549354 POTEFA5A3E0 1075 aa12.15□□□□□ -0.46
LINC00661-204ENST00000549354 CTNND1O60716 968 aaKnown RBP12.15□□□□□ -0.46
LINC00661-204ENST00000549354 GLI1P08151 1106 aa12.15□□□□□ -0.46
LINC00661-204ENST00000549354 POTEIP0CG38 1075 aa12.15□□□□□ -0.46
LINC00661-204ENST00000549354 FAM83BQ5T0W9 1011 aa12.15□□□□□ -0.46
LINC00661-204ENST00000549354 KRT79Q5XKE5 535 aa12.15□□□□□ -0.46
LINC00661-204ENST00000549354 POTEGQ6S5H5 508 aa12.15□□□□□ -0.46
LINC00661-204ENST00000549354 POTEEQ6S8J3 1075 aa12.15□□□□□ -0.46
LINC00661-204ENST00000549354 PPM1EQ8WY54 764 aa12.15□□□□□ -0.46
LINC00661-204ENST00000549354 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.15□□□□□ -0.46
LINC00661-204ENST00000549354 ZNF112Q9UJU3 913 aa12.15□□□□□ -0.46
LINC00661-204ENST00000549354 A0A1W2PQC6 194 aa12.14□□□□□ -0.47
LINC00661-204ENST00000549354 ZBTB39O15060 712 aa12.14□□□□□ -0.47
LINC00661-204ENST00000549354 ERLIN2O94905 339 aa12.14□□□□□ -0.47
LINC00661-204ENST00000549354 HOXA7P31268 230 aaPredicted RBP12.14□□□□□ -0.47
LINC00661-204ENST00000549354 MNAT1P51948 309 aa12.14□□□□□ -0.47
LINC00661-204ENST00000549354 KIAA0753Q2KHM9 967 aa12.14□□□□□ -0.47
LINC00661-204ENST00000549354 PRR16Q569H4 304 aa12.14□□□□□ -0.47
LINC00661-204ENST00000549354 BLOC1S4Q9NUP1 217 aa12.14□□□□□ -0.47
LINC00661-204ENST00000549354 MCM3P25205 808 aa12.14□□□□□ -0.47
LINC00661-204ENST00000549354 TTMPQ5BVD1 217 aa12.14□□□□□ -0.47
LINC00661-204ENST00000549354 ICE2Q659A1 982 aa12.14□□□□□ -0.47
LINC00661-204ENST00000549354 TADA2BQ86TJ2 420 aa12.14□□□□□ -0.47
LINC00661-204ENST00000549354 CCDC84Q86UT8 332 aaPredicted RBP12.14□□□□□ -0.47
LINC00661-204ENST00000549354 NLGN2Q8NFZ4 835 aa12.14□□□□□ -0.47
LINC00661-204ENST00000549354 TRIM58Q8NG06 486 aa12.14□□□□□ -0.47
LINC00661-204ENST00000549354 PIGOQ8TEQ8 1089 aa12.14□□□□□ -0.47
LINC00661-204ENST00000549354 KAT2BQ92831 832 aa12.14□□□□□ -0.47
LINC00661-204ENST00000549354 SPAG5Q96R06 1193 aa12.14□□□□□ -0.47
LINC00661-204ENST00000549354 TTYH3Q9C0H2 523 aa12.14□□□□□ -0.47
LINC00661-204ENST00000549354 KIAA1683Q9H0B3 1180 aa12.14□□□□□ -0.47
LINC00661-204ENST00000549354 TLDC2A0PJX2 215 aa12.14□□□□□ -0.47
LINC00661-204ENST00000549354 HSF2BPO75031 334 aa12.14□□□□□ -0.47
LINC00661-204ENST00000549354 TUBBP07437 444 aa12.14□□□□□ -0.47
LINC00661-204ENST00000549354 TUBB4BP68371 445 aa12.14□□□□□ -0.47
LINC00661-204ENST00000549354 ARHGAP4P98171 946 aa12.14□□□□□ -0.47
LINC00661-204ENST00000549354 LARP4BQ92615 738 aaKnown RBP12.14□□□□□ -0.47
LINC00661-204ENST00000549354 DPH5Q9H2P9 285 aa12.14□□□□□ -0.47
LINC00661-204ENST00000549354 PPANQ9NQ55 473 aaKnown RBP12.14□□□□□ -0.47
LINC00661-204ENST00000549354 PPP1R1BQ9UD71 204 aaPredicted RBP12.14□□□□□ -0.47
LINC00661-204ENST00000549354 HACL1Q9UJ83 578 aa12.14□□□□□ -0.47
LINC00661-204ENST00000549354 ZNF541Q9H0D2 1346 aa12.14□□□□□ -0.47
LINC00661-204ENST00000549354 KCNK3O14649 394 aa12.13□□□□□ -0.47
LINC00661-204ENST00000549354 AARSP49588 968 aaKnown RBP eCLIP12.13□□□□□ -0.47
LINC00661-204ENST00000549354 GHRHRQ02643 423 aa12.13□□□□□ -0.47
LINC00661-204ENST00000549354 KCNA1Q09470 495 aa12.13□□□□□ -0.47
LINC00661-204ENST00000549354 NNTQ13423 1086 aa12.13□□□□□ -0.47
LINC00661-204ENST00000549354 MEA1Q16626 185 aa12.13□□□□□ -0.47
LINC00661-204ENST00000549354 CYP2W1Q8TAV3 490 aa12.13□□□□□ -0.47
LINC00661-204ENST00000549354 ETNPPLQ8TBG4 499 aa12.13□□□□□ -0.47
LINC00661-204ENST00000549354 LPAR1Q92633 364 aa12.13□□□□□ -0.47
LINC00661-204ENST00000549354 LENG9Q96B70 501 aa12.13□□□□□ -0.47
LINC00661-204ENST00000549354 ZIM3Q96PE6 472 aa12.13□□□□□ -0.47
LINC00661-204ENST00000549354 ALS2CR12Q96Q35 445 aa12.13□□□□□ -0.47
LINC00661-204ENST00000549354 CCDC113Q9H0I3 377 aa12.13□□□□□ -0.47
LINC00661-204ENST00000549354 STIM2Q9P246 746 aa12.13□□□□□ -0.47
LINC00661-204ENST00000549354 CEP104O60308 925 aa12.13□□□□□ -0.47
LINC00661-204ENST00000549354 PALMO75781 387 aa12.13□□□□□ -0.47
LINC00661-204ENST00000549354 HEXIM1O94992 359 aaKnown RBP12.13□□□□□ -0.47
LINC00661-204ENST00000549354 AMPD3Q01432 767 aa12.13□□□□□ -0.47
LINC00661-204ENST00000549354 ADCY1Q08828 1119 aa12.13□□□□□ -0.47
LINC00661-204ENST00000549354 HAUS3Q68CZ6 603 aa12.13□□□□□ -0.47
LINC00661-204ENST00000549354 SAMD7Q7Z3H4 446 aa12.13□□□□□ -0.47
LINC00661-204ENST00000549354 SLFN12Q8IYM2 578 aa12.13□□□□□ -0.47
LINC00661-204ENST00000549354 GLIS2Q9BZE0 524 aaPredicted RBP12.13□□□□□ -0.47
LINC00661-204ENST00000549354 CAPN7Q9Y6W3 813 aa12.13□□□□□ -0.47
LINC00661-204ENST00000549354 MYO1FO00160 1098 aa12.13□□□□□ -0.47
LINC00661-204ENST00000549354 VWA3BQ502W6 1294 aa12.13□□□□□ -0.47
LINC00661-204ENST00000549354 IQCEQ6IPM2 695 aa12.13□□□□□ -0.47
LINC00661-204ENST00000549354 AENQ8WTP8 325 aaKnown RBP12.13□□□□□ -0.47
LINC00661-204ENST00000549354 DHTKD1Q96HY7 919 aaPredicted RBP12.13□□□□□ -0.47
LINC00661-204ENST00000549354 FAM84AQ96KN4 292 aa12.13□□□□□ -0.47
LINC00661-204ENST00000549354 VIPAS39Q9H9C1 493 aa12.13□□□□□ -0.47
LINC00661-204ENST00000549354 DOCK1Q14185 1865 aa12.12□□□□□ -0.47
LINC00661-204ENST00000549354 BICDL2A1A5D9 508 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms