RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 DSC3Q14574 896 aa5.48□□□□□ -1.53
SCAF11-212ENST00000549162 NFRKBQ6P4R8 1299 aa5.48□□□□□ -1.53
SCAF11-212ENST00000549162 SYNE3Q6ZMZ3 975 aa5.48□□□□□ -1.53
SCAF11-212ENST00000549162 ANKRD33Q7Z3H0 272 aa5.48□□□□□ -1.53
SCAF11-212ENST00000549162 FRMD5Q7Z6J6 570 aa5.48□□□□□ -1.53
SCAF11-212ENST00000549162 RNF135Q8IUD6 432 aa5.48□□□□□ -1.53
SCAF11-212ENST00000549162 PLPP7Q8NBV4 271 aa5.48□□□□□ -1.53
SCAF11-212ENST00000549162 MRPS27Q92552 414 aaKnown RBP5.48□□□□□ -1.53
SCAF11-212ENST00000549162 BRF1Q92994 677 aa5.48□□□□□ -1.53
SCAF11-212ENST00000549162 SYTL4Q96C24 671 aaPredicted RBP5.48□□□□□ -1.53
SCAF11-212ENST00000549162 ADAM33Q9BZ11 813 aa5.48□□□□□ -1.53
SCAF11-212ENST00000549162 OSBPL2Q9H1P3 480 aa5.48□□□□□ -1.53
SCAF11-212ENST00000549162 SENP2Q9HC62 589 aa5.48□□□□□ -1.53
SCAF11-212ENST00000549162 KIAA1586Q9HCI6 787 aa5.48□□□□□ -1.53
SCAF11-212ENST00000549162 CABP5Q9NP86 173 aa5.48□□□□□ -1.53
SCAF11-212ENST00000549162 GABBR1Q9UBS5 961 aa5.48□□□□□ -1.53
SCAF11-212ENST00000549162 SMC3Q9UQE7 1217 aa5.48□□□□□ -1.53
SCAF11-212ENST00000549162 VWA8A3KMH1 1905 aa5.48□□□□□ -1.53
SCAF11-212ENST00000549162 MAFO75444 373 aaPredicted RBP5.48□□□□□ -1.53
SCAF11-212ENST00000549162 F2P00734 622 aa5.48□□□□□ -1.53
SCAF11-212ENST00000549162 EDN1P05305 212 aa5.48□□□□□ -1.53
SCAF11-212ENST00000549162 CCND2P30279 289 aa5.48□□□□□ -1.53
SCAF11-212ENST00000549162 ALDH5A1P51649 535 aaPredicted RBP5.48□□□□□ -1.53
SCAF11-212ENST00000549162 APOBRQ0VD83 1088 aa5.48□□□□□ -1.53
SCAF11-212ENST00000549162 R3HDM1Q15032 1099 aaKnown RBP5.48□□□□□ -1.53
SCAF11-212ENST00000549162 L1TD1Q5T7N2 865 aaKnown RBP5.48□□□□□ -1.53
SCAF11-212ENST00000549162 SP7Q8TDD2 431 aaPredicted RBP5.48□□□□□ -1.53
SCAF11-212ENST00000549162 HDAC7Q8WUI4 952 aa5.48□□□□□ -1.53
SCAF11-212ENST00000549162 NUP133Q8WUM0 1156 aa5.48□□□□□ -1.53
SCAF11-212ENST00000549162 APBA2Q99767 749 aa5.48□□□□□ -1.53
SCAF11-212ENST00000549162 PDCD2LQ9BRP1 358 aa5.48□□□□□ -1.53
SCAF11-212ENST00000549162 ALG1Q9BT22 464 aa5.48□□□□□ -1.53
SCAF11-212ENST00000549162 PLEKHA5Q9HAU0 1116 aa5.48□□□□□ -1.53
SCAF11-212ENST00000549162 CHST12Q9NRB3 414 aa5.48□□□□□ -1.53
SCAF11-212ENST00000549162 DACH1Q9UI36 760 aa5.48□□□□□ -1.53
SCAF11-212ENST00000549162 TSKSQ9UJT2 592 aa5.48□□□□□ -1.53
SCAF11-212ENST00000549162 OGDHLQ9ULD0 1010 aa5.48□□□□□ -1.53
SCAF11-212ENST00000549162 FAM184BQ9ULE4 1060 aa5.48□□□□□ -1.53
SCAF11-212ENST00000549162 TMEM265A0A087WTH1 108 aa5.48□□□□□ -1.53
SCAF11-212ENST00000549162 MICAL2O94851 1124 aa5.48□□□□□ -1.53
SCAF11-212ENST00000549162 PTP4A2Q12974 167 aa5.48□□□□□ -1.53
SCAF11-212ENST00000549162 GPR153Q6NV75 609 aa5.48□□□□□ -1.53
SCAF11-212ENST00000549162 FBXO11Q86XK2 927 aa5.48□□□□□ -1.53
SCAF11-212ENST00000549162 RAVER1Q8IY67 606 aaKnown RBP5.48□□□□□ -1.53
SCAF11-212ENST00000549162 RPUSD2Q8IZ73 545 aaKnown RBP5.48□□□□□ -1.53
SCAF11-212ENST00000549162 MTRQ99707 1265 aa5.48□□□□□ -1.53
SCAF11-212ENST00000549162 ANO3Q9BYT9 981 aa5.48□□□□□ -1.53
SCAF11-212ENST00000549162 NUCKS1Q9H1E3 243 aaKnown RBP5.48□□□□□ -1.53
SCAF11-212ENST00000549162 PCDHA7Q9UN72 937 aa5.48□□□□□ -1.53
SCAF11-212ENST00000549162 COL4A3BPQ9Y5P4 624 aa5.48□□□□□ -1.53
SCAF11-212ENST00000549162 ANAPC1Q9H1A4 1944 aa5.48□□□□□ -1.53
SCAF11-212ENST00000549162 SMIM35A0A1B0GVV1 85 aa5.47□□□□□ -1.53
SCAF11-212ENST00000549162 ZNF500O60304 480 aaPredicted RBP5.47□□□□□ -1.53
SCAF11-212ENST00000549162 TLR2O60603 784 aa5.47□□□□□ -1.53
SCAF11-212ENST00000549162 CD4P01730 458 aa5.47□□□□□ -1.53
SCAF11-212ENST00000549162 CYP2D6P10635 497 aa5.47□□□□□ -1.53
SCAF11-212ENST00000549162 ATP1A3P13637 1013 aa5.47□□□□□ -1.53
SCAF11-212ENST00000549162 IBSPP21815 317 aaPredicted RBP5.47□□□□□ -1.53
SCAF11-212ENST00000549162 ZNF132P52740 706 aa5.47□□□□□ -1.53
SCAF11-212ENST00000549162 MRPS9P82933 396 aaKnown RBP5.47□□□□□ -1.53
SCAF11-212ENST00000549162 TMEM132BQ14DG7 1078 aa5.47□□□□□ -1.53
SCAF11-212ENST00000549162 C8orf76Q96K31 380 aa5.47□□□□□ -1.53
SCAF11-212ENST00000549162 OCEL1Q9H607 264 aa5.47□□□□□ -1.53
SCAF11-212ENST00000549162 ZNF277Q9NRM2 450 aaPredicted RBP5.47□□□□□ -1.53
SCAF11-212ENST00000549162 METTL5Q9NRN9 209 aaKnown RBP5.47□□□□□ -1.53
SCAF11-212ENST00000549162 TTC7AQ9ULT0 858 aaPredicted RBP5.47□□□□□ -1.53
SCAF11-212ENST00000549162 PLEKHA8P1O95397 391 aa5.47□□□□□ -1.53
SCAF11-212ENST00000549162 PRLRP16471 622 aa5.47□□□□□ -1.53
SCAF11-212ENST00000549162 ZNF76P36508 570 aa5.47□□□□□ -1.53
SCAF11-212ENST00000549162 EIF4EBP2Q13542 120 aaPredicted RBP5.47□□□□□ -1.53
SCAF11-212ENST00000549162 ZBTB6Q15916 424 aa5.47□□□□□ -1.53
SCAF11-212ENST00000549162 ASTE1Q2TB18 679 aaPredicted RBP5.47□□□□□ -1.53
SCAF11-212ENST00000549162 TTC38Q5R3I4 469 aa5.47□□□□□ -1.53
SCAF11-212ENST00000549162 C10orf76Q5T2E6 689 aa5.47□□□□□ -1.53
SCAF11-212ENST00000549162 HAUS3Q68CZ6 603 aa5.47□□□□□ -1.53
SCAF11-212ENST00000549162 LRRC55Q6ZSA7 311 aa5.47□□□□□ -1.53
SCAF11-212ENST00000549162 MAP4K3Q8IVH8 894 aa5.47□□□□□ -1.53
SCAF11-212ENST00000549162 DHX40Q8IX18 779 aaKnown RBP5.47□□□□□ -1.53
SCAF11-212ENST00000549162 SDR42E1Q8WUS8 393 aa5.47□□□□□ -1.53
SCAF11-212ENST00000549162 RILPL2Q969X0 211 aa5.47□□□□□ -1.53
SCAF11-212ENST00000549162 IL37Q9NZH6 218 aa5.47□□□□□ -1.53
SCAF11-212ENST00000549162 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.47□□□□□ -1.53
SCAF11-212ENST00000549162 A0A1W2PPC1 479 aa5.47□□□□□ -1.53
SCAF11-212ENST00000549162 RASSF7Q02833 373 aa5.47□□□□□ -1.53
SCAF11-212ENST00000549162 TTI2Q6NXR4 508 aa5.47□□□□□ -1.53
SCAF11-212ENST00000549162 STON2Q8WXE9 905 aa5.47□□□□□ -1.53
SCAF11-212ENST00000549162 CSRNP1Q96S65 589 aa5.47□□□□□ -1.53
SCAF11-212ENST00000549162 DNAJC7Q99615 494 aa5.47□□□□□ -1.53
SCAF11-212ENST00000549162 FZD8Q9H461 694 aa5.47□□□□□ -1.53
SCAF11-212ENST00000549162 ORC3Q9UBD5 711 aaPredicted RBP5.47□□□□□ -1.53
SCAF11-212ENST00000549162 CNTNAP2Q9UHC6 1331 aa5.47□□□□□ -1.53
SCAF11-212ENST00000549162 TRIM75PA6NK02 468 aa5.46□□□□□ -1.53
SCAF11-212ENST00000549162 SPTLC2O15270 562 aa5.46□□□□□ -1.53
SCAF11-212ENST00000549162 TREHO43280 583 aa5.46□□□□□ -1.53
SCAF11-212ENST00000549162 SORBS3O60504 671 aa5.46□□□□□ -1.53
SCAF11-212ENST00000549162 ADAMTS4O75173 837 aa5.46□□□□□ -1.53
SCAF11-212ENST00000549162 IDH1O75874 414 aaKnown RBP5.46□□□□□ -1.53
SCAF11-212ENST00000549162 PFKMP08237 780 aa5.46□□□□□ -1.53
SCAF11-212ENST00000549162 ARHGAP1Q07960 439 aa5.46□□□□□ -1.53
SCAF11-212ENST00000549162 MTA1Q13330 715 aa5.46□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms