RNA–Protein interactions for RNA: ENST00000548421.2

BRF1-213, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-213ENST00000548421 C16orf70Q9BSU1 422 aa32.02■■■□□ 2.72
BRF1-213ENST00000548421 MSCO60682 206 aa32.01■■■□□ 2.71
BRF1-213ENST00000548421 C6orf222P0C671 652 aaPredicted RBP32.01■■■□□ 2.71
BRF1-213ENST00000548421 SARSP49591 514 aaKnown RBP32.01■■■□□ 2.71
BRF1-213ENST00000548421 ASIC1P78348 528 aa32.01■■■□□ 2.71
BRF1-213ENST00000548421 ATP8B4Q8TF62 1192 aa32.01■■■□□ 2.71
BRF1-213ENST00000548421 CEP170P1Q96L14 293 aa32.01■■■□□ 2.71
BRF1-213ENST00000548421 GSDMAQ96QA5 445 aa32.01■■■□□ 2.71
BRF1-213ENST00000548421 RUSC1Q9BVN2 902 aa32.01■■■□□ 2.71
BRF1-213ENST00000548421 NIFKQ9BYG3 293 aaKnown RBP32.01■■■□□ 2.71
BRF1-213ENST00000548421 XPNPEP3Q9NQH7 507 aa32.01■■■□□ 2.71
BRF1-213ENST00000548421 FRMPD3Q5JV73 1810 aa32.01■■■□□ 2.71
BRF1-213ENST00000548421 KRT18P05783 430 aaKnown RBP32■■■□□ 2.71
BRF1-213ENST00000548421 NPEPPSP55786 919 aa32■■■□□ 2.71
BRF1-213ENST00000548421 NKX3-2P78367 333 aa32■■■□□ 2.71
BRF1-213ENST00000548421 PLCB4Q15147 1175 aa32■■■□□ 2.71
BRF1-213ENST00000548421 PADI6Q6TGC4 694 aa32■■■□□ 2.71
BRF1-213ENST00000548421 SASS6Q6UVJ0 657 aa32■■■□□ 2.71
BRF1-213ENST00000548421 C1orf186Q6ZWK4 172 aa32■■■□□ 2.71
BRF1-213ENST00000548421 DYMQ7RTS9 669 aa32■■■□□ 2.71
BRF1-213ENST00000548421 CYP26B1Q9NR63 512 aa32■■■□□ 2.71
BRF1-213ENST00000548421 RPN1P04843 607 aaKnown RBP31.99■■■□□ 2.71
BRF1-213ENST00000548421 ZNF445P59923 1031 aa31.99■■■□□ 2.71
BRF1-213ENST00000548421 IRX5P78411 483 aaPredicted RBP31.99■■■□□ 2.71
BRF1-213ENST00000548421 BEX3Q00994 111 aa31.99■■■□□ 2.71
BRF1-213ENST00000548421 SLC9C1Q4G0N8 1177 aa31.99■■■□□ 2.71
BRF1-213ENST00000548421 DNAJC19Q96DA6 116 aa31.99■■■□□ 2.71
BRF1-213ENST00000548421 SH2D3AQ9BRG2 576 aa31.99■■■□□ 2.71
BRF1-213ENST00000548421 H3BRB1 525 aa31.98■■■□□ 2.71
BRF1-213ENST00000548421 TUT1Q9H6E5 874 aaKnown RBP31.98■■■□□ 2.71
BRF1-213ENST00000548421 MYADML2A6NDP7 307 aa31.97■■■□□ 2.71
BRF1-213ENST00000548421 ADAMTS4O75173 837 aa31.97■■■□□ 2.71
BRF1-213ENST00000548421 PGK1P00558 417 aa31.97■■■□□ 2.71
BRF1-213ENST00000548421 MTERF2Q49AM1 385 aa31.97■■■□□ 2.71
BRF1-213ENST00000548421 RMND1Q9NWS8 449 aa31.97■■■□□ 2.71
BRF1-213ENST00000548421 MAN1B1Q9UKM7 699 aa31.97■■■□□ 2.71
BRF1-213ENST00000548421 TRPC6Q9Y210 931 aa31.97■■■□□ 2.71
BRF1-213ENST00000548421 PPME1Q9Y570 386 aa31.97■■■□□ 2.71
BRF1-213ENST00000548421 MYH11P35749 1972 aa31.97■■■□□ 2.71
BRF1-213ENST00000548421 NPHP3-ACAD11A0A0J9YXS1 232 aa31.97■■■□□ 2.71
BRF1-213ENST00000548421 KLRC4O43908 158 aa31.97■■■□□ 2.71
BRF1-213ENST00000548421 HBP1O60381 514 aa31.97■■■□□ 2.71
BRF1-213ENST00000548421 KPNA6O60684 536 aa31.97■■■□□ 2.71
BRF1-213ENST00000548421 F2P00734 622 aa31.97■■■□□ 2.71
BRF1-213ENST00000548421 GUCY2CP25092 1073 aa31.97■■■□□ 2.71
BRF1-213ENST00000548421 GIT2Q14161 759 aa31.97■■■□□ 2.71
BRF1-213ENST00000548421 UNC13DQ70J99 1090 aa31.97■■■□□ 2.71
BRF1-213ENST00000548421 CCDC47Q96A33 483 aaKnown RBP31.97■■■□□ 2.71
BRF1-213ENST00000548421 REEP2Q9BRK0 252 aa31.97■■■□□ 2.71
BRF1-213ENST00000548421 PVALEFA0A1B0GWK0 134 aa31.96■■■□□ 2.71
BRF1-213ENST00000548421 BIN1O00499 593 aa31.96■■■□□ 2.71
BRF1-213ENST00000548421 ZEB2O60315 1214 aa31.96■■■□□ 2.71
BRF1-213ENST00000548421 USO1O60763 962 aaKnown RBP31.96■■■□□ 2.71
BRF1-213ENST00000548421 MYL3P08590 195 aa31.96■■■□□ 2.71
BRF1-213ENST00000548421 CCDC192P0DO97 292 aa31.96■■■□□ 2.71
BRF1-213ENST00000548421 RAD51AP2Q09MP3 1159 aa31.96■■■□□ 2.71
BRF1-213ENST00000548421 KCNB1Q14721 858 aa31.96■■■□□ 2.71
BRF1-213ENST00000548421 GNASQ5JWF2 1037 aa31.96■■■□□ 2.71
BRF1-213ENST00000548421 LRSAM1Q6UWE0 723 aa31.96■■■□□ 2.71
BRF1-213ENST00000548421 TRIML1Q8N9V2 468 aa31.96■■■□□ 2.71
BRF1-213ENST00000548421 FUCA2Q9BTY2 467 aa31.96■■■□□ 2.71
BRF1-213ENST00000548421 RNPEPQ9H4A4 650 aa31.96■■■□□ 2.71
BRF1-213ENST00000548421 DGAT1O75907 488 aa31.95■■■□□ 2.7
BRF1-213ENST00000548421 IDEP14735 1019 aa31.95■■■□□ 2.7
BRF1-213ENST00000548421 TYRO3Q06418 890 aa31.95■■■□□ 2.7
BRF1-213ENST00000548421 TARBP2Q15633 366 aaKnown RBP31.95■■■□□ 2.7
BRF1-213ENST00000548421 TIPINQ9BVW5 301 aa31.95■■■□□ 2.7
BRF1-213ENST00000548421 XRN2Q9H0D6 950 aaKnown RBP eCLIP31.95■■■□□ 2.7
BRF1-213ENST00000548421 CST5P28325 142 aaPredicted RBP31.94■■■□□ 2.7
BRF1-213ENST00000548421 CACNB1Q02641 598 aaPredicted RBP31.94■■■□□ 2.7
BRF1-213ENST00000548421 PKN2Q16513 984 aaKnown RBP31.94■■■□□ 2.7
BRF1-213ENST00000548421 KMT5BQ4FZB7 885 aa31.94■■■□□ 2.7
BRF1-213ENST00000548421 FBXO46Q6PJ61 603 aaPredicted RBP31.94■■■□□ 2.7
BRF1-213ENST00000548421 CCDC65Q8IXS2 484 aa31.94■■■□□ 2.7
BRF1-213ENST00000548421 EXOC1Q9NV70 894 aa31.94■■■□□ 2.7
BRF1-213ENST00000548421 ODF2LQ9ULJ1 636 aa31.94■■■□□ 2.7
BRF1-213ENST00000548421 KAT6AQ92794 2004 aa31.94■■■□□ 2.7
BRF1-213ENST00000548421 FRMD3A2A2Y4 597 aa31.93■■■□□ 2.7
BRF1-213ENST00000548421 PURAQ00577 322 aaKnown RBP31.93■■■□□ 2.7
BRF1-213ENST00000548421 MORC3Q14149 939 aa31.93■■■□□ 2.7
BRF1-213ENST00000548421 KLHDC9Q8NEP7 349 aa31.93■■■□□ 2.7
BRF1-213ENST00000548421 KAT2BQ92831 832 aa31.93■■■□□ 2.7
BRF1-213ENST00000548421 CEP89Q96ST8 783 aa31.93■■■□□ 2.7
BRF1-213ENST00000548421 KATNAL1Q9BW62 490 aa31.93■■■□□ 2.7
BRF1-213ENST00000548421 PANK4Q9NVE7 773 aa31.93■■■□□ 2.7
BRF1-213ENST00000548421 TBCAO75347 108 aaKnown RBP31.92■■■□□ 2.7
BRF1-213ENST00000548421 RHOBTB3O94955 611 aa31.92■■■□□ 2.7
BRF1-213ENST00000548421 RFC5P40937 340 aa31.92■■■□□ 2.7
BRF1-213ENST00000548421 POLGP54098 1239 aaPredicted RBP31.92■■■□□ 2.7
BRF1-213ENST00000548421 STX1AQ16623 288 aa31.92■■■□□ 2.7
BRF1-213ENST00000548421 ISM2Q6H9L7 571 aa31.92■■■□□ 2.7
BRF1-213ENST00000548421 ATP6V0A4Q9HBG4 840 aa31.92■■■□□ 2.7
BRF1-213ENST00000548421 NLRP12P59046 1061 aa31.91■■■□□ 2.7
BRF1-213ENST00000548421 ZNF484Q5JVG2 852 aa31.91■■■□□ 2.7
BRF1-213ENST00000548421 LHX8Q68G74 356 aa31.91■■■□□ 2.7
BRF1-213ENST00000548421 RNF180Q86T96 592 aa31.91■■■□□ 2.7
BRF1-213ENST00000548421 MCPH1Q8NEM0 835 aa31.91■■■□□ 2.7
BRF1-213ENST00000548421 UNC93B1Q9H1C4 597 aa31.91■■■□□ 2.7
BRF1-213ENST00000548421 DHX33Q9H6R0 707 aaKnown RBP31.91■■■□□ 2.7
BRF1-213ENST00000548421 COL1A2P08123 1366 aa31.91■■■□□ 2.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms