RNA–Protein interactions for RNA: ENST00000546962.5

TMEM116-204, Transcript of transmembrane protein 116, humanhuman

APPRIS ALT2 TSL 5

Gene TMEM116, Length 319 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-204ENST00000546962 ZNF143P52747 638 aaPredicted RBP3.72□□□□□ -1.81
TMEM116-204ENST00000546962 CTSWP56202 376 aa3.72□□□□□ -1.81
TMEM116-204ENST00000546962 RAC1P63000 192 aa3.72□□□□□ -1.81
TMEM116-204ENST00000546962 TFF2Q03403 129 aa3.72□□□□□ -1.81
TMEM116-204ENST00000546962 FPGSQ05932 587 aa3.72□□□□□ -1.81
TMEM116-204ENST00000546962 CACNB2Q08289 660 aaPredicted RBP3.72□□□□□ -1.81
TMEM116-204ENST00000546962 RAB30Q15771 203 aa3.72□□□□□ -1.81
TMEM116-204ENST00000546962 TM4SF20Q53R12 229 aa3.72□□□□□ -1.81
TMEM116-204ENST00000546962 ANKRD39Q53RE8 183 aa3.72□□□□□ -1.81
TMEM116-204ENST00000546962 MFSD14BQ5SR56 506 aa3.72□□□□□ -1.81
TMEM116-204ENST00000546962 NOL9Q5SY16 702 aaKnown RBP3.72□□□□□ -1.81
TMEM116-204ENST00000546962 CC2D1BQ5T0F9 858 aaKnown RBP3.72□□□□□ -1.81
TMEM116-204ENST00000546962 MFSD14CQ5VZR4 134 aa3.72□□□□□ -1.81
TMEM116-204ENST00000546962 HEATR6Q6AI08 1181 aaKnown RBP3.72□□□□□ -1.81
TMEM116-204ENST00000546962 IGF2-ASQ6U949 168 aa3.72□□□□□ -1.81
TMEM116-204ENST00000546962 SLC39A5Q6ZMH5 540 aa3.72□□□□□ -1.81
TMEM116-204ENST00000546962 MIGA2Q7L4E1 593 aa3.72□□□□□ -1.81
TMEM116-204ENST00000546962 ZC3HAV1Q7Z2W4 902 aaKnown RBP3.72□□□□□ -1.81
TMEM116-204ENST00000546962 PRRT2Q7Z6L0 340 aaPredicted RBP3.72□□□□□ -1.81
TMEM116-204ENST00000546962 CCAR1Q8IX12 1150 aaKnown RBP3.72□□□□□ -1.81
TMEM116-204ENST00000546962 C2CD4AQ8NCU7 369 aaPredicted RBP3.72□□□□□ -1.81
TMEM116-204ENST00000546962 LRRN4CLQ8ND94 238 aa3.72□□□□□ -1.81
TMEM116-204ENST00000546962 TDRD7Q8NHU6 1098 aaKnown RBP3.72□□□□□ -1.81
TMEM116-204ENST00000546962 RIN3Q8TB24 985 aa3.72□□□□□ -1.81
TMEM116-204ENST00000546962 CYB5D2Q8WUJ1 264 aa3.72□□□□□ -1.81
TMEM116-204ENST00000546962 STAG1Q8WVM7 1258 aa3.72□□□□□ -1.81
TMEM116-204ENST00000546962 LPAR1Q92633 364 aa3.72□□□□□ -1.81
TMEM116-204ENST00000546962 VWCEQ96DN2 955 aa3.72□□□□□ -1.81
TMEM116-204ENST00000546962 CLUHP3Q96NS8 147 aa3.72□□□□□ -1.81
TMEM116-204ENST00000546962 PRRX2Q99811 253 aa3.72□□□□□ -1.81
TMEM116-204ENST00000546962 HAUS7Q99871 368 aa3.72□□□□□ -1.81
TMEM116-204ENST00000546962 DHRS4Q9BTZ2 278 aa3.72□□□□□ -1.81
TMEM116-204ENST00000546962 PLVAPQ9BX97 442 aa3.72□□□□□ -1.81
TMEM116-204ENST00000546962 FAM126AQ9BYI3 521 aaPredicted RBP3.72□□□□□ -1.81
TMEM116-204ENST00000546962 FOXQ1Q9C009 403 aa3.72□□□□□ -1.81
TMEM116-204ENST00000546962 KLHL25Q9H0H3 589 aa3.72□□□□□ -1.81
TMEM116-204ENST00000546962 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP3.72□□□□□ -1.81
TMEM116-204ENST00000546962 PNNQ9H307 717 aaKnown RBP3.72□□□□□ -1.81
TMEM116-204ENST00000546962 SLC28A3Q9HAS3 691 aa3.72□□□□□ -1.81
TMEM116-204ENST00000546962 SSU72Q9NP77 194 aaKnown RBP3.72□□□□□ -1.81
TMEM116-204ENST00000546962 HYPKQ9NX55 129 aa3.72□□□□□ -1.81
TMEM116-204ENST00000546962 CWC25Q9NXE8 425 aaPredicted RBP3.72□□□□□ -1.81
TMEM116-204ENST00000546962 DBF4Q9UBU7 674 aaPredicted RBP3.72□□□□□ -1.81
TMEM116-204ENST00000546962 APEX2Q9UBZ4 518 aa3.72□□□□□ -1.81
TMEM116-204ENST00000546962 ZNF112Q9UJU3 913 aa3.72□□□□□ -1.81
TMEM116-204ENST00000546962 CEP131Q9UPN4 1083 aa3.72□□□□□ -1.81
TMEM116-204ENST00000546962 ACTL7BQ9Y614 415 aa3.72□□□□□ -1.81
TMEM116-204ENST00000546962 ZHX2Q9Y6X8 837 aa3.72□□□□□ -1.81
TMEM116-204ENST00000546962 TAF1P21675 1872 aa3.72□□□□□ -1.81
TMEM116-204ENST00000546962 SCN9AQ15858 1988 aa3.72□□□□□ -1.81
TMEM116-204ENST00000546962 COL3A1P02461 1466 aaPredicted RBP3.72□□□□□ -1.81
TMEM116-204ENST00000546962 NUP98P52948 1817 aa3.72□□□□□ -1.81
TMEM116-204ENST00000546962 AOX1Q06278 1338 aa3.71□□□□□ -1.81
TMEM116-204ENST00000546962 SIPA1L3O60292 1781 aaPredicted RBP3.71□□□□□ -1.81
TMEM116-204ENST00000546962 LAMB1P07942 1786 aa3.71□□□□□ -1.81
TMEM116-204ENST00000546962 A0A087X0B3 334 aa3.71□□□□□ -1.82
TMEM116-204ENST00000546962 TRAV20A0A0B4J274 112 aa3.71□□□□□ -1.82
TMEM116-204ENST00000546962 KRBA1A5PL33 1030 aa3.71□□□□□ -1.82
TMEM116-204ENST00000546962 SPDYE3A6NKU9 549 aa3.71□□□□□ -1.82
TMEM116-204ENST00000546962 KBTBD13C9JR72 458 aa3.71□□□□□ -1.82
TMEM116-204ENST00000546962 AGRPO00253 132 aa3.71□□□□□ -1.82
TMEM116-204ENST00000546962 PLD2O14939 933 aa3.71□□□□□ -1.82
TMEM116-204ENST00000546962 RFPL3O75679 317 aa3.71□□□□□ -1.82
TMEM116-204ENST00000546962 ALX3O95076 343 aa3.71□□□□□ -1.82
TMEM116-204ENST00000546962 ITGAVP06756 1048 aa3.71□□□□□ -1.82
TMEM116-204ENST00000546962 MYCLP1P12525 358 aaPredicted RBP3.71□□□□□ -1.82
TMEM116-204ENST00000546962 POU3F3P20264 500 aaPredicted RBP3.71□□□□□ -1.82
TMEM116-204ENST00000546962 CCND3P30281 292 aaPredicted RBP3.71□□□□□ -1.82
TMEM116-204ENST00000546962 MAPK4P31152 587 aa3.71□□□□□ -1.82
TMEM116-204ENST00000546962 RGS2P41220 211 aa3.71□□□□□ -1.82
TMEM116-204ENST00000546962 GRIA2P42262 883 aa3.71□□□□□ -1.82
TMEM116-204ENST00000546962 PPP2R2AP63151 447 aa3.71□□□□□ -1.82
TMEM116-204ENST00000546962 SNRPNP63162 240 aaKnown RBP3.71□□□□□ -1.82
TMEM116-204ENST00000546962 ADGRE1Q14246 886 aa3.71□□□□□ -1.82
TMEM116-204ENST00000546962 HSP90AA2PQ14568 343 aaPredicted RBP3.71□□□□□ -1.82
TMEM116-204ENST00000546962 TAF7LQ5H9L4 462 aa3.71□□□□□ -1.82
TMEM116-204ENST00000546962 ZNF385CQ66K41 422 aaPredicted RBP3.71□□□□□ -1.82
TMEM116-204ENST00000546962 ADAT2Q7Z6V5 191 aaKnown RBP3.71□□□□□ -1.82
TMEM116-204ENST00000546962 JAMLQ86YT9 394 aa3.71□□□□□ -1.82
TMEM116-204ENST00000546962 SCUBE1Q8IWY4 988 aa3.71□□□□□ -1.82
TMEM116-204ENST00000546962 CCDC144CPQ8IYA2 1237 aa3.71□□□□□ -1.82
TMEM116-204ENST00000546962 SMYD4Q8IYR2 804 aaPredicted RBP3.71□□□□□ -1.82
TMEM116-204ENST00000546962 AGGF1Q8N302 714 aaeCLIP3.71□□□□□ -1.82
TMEM116-204ENST00000546962 MFSD2AQ8NA29 543 aa3.71□□□□□ -1.82
TMEM116-204ENST00000546962 TTLL11Q8NHH1 800 aa3.71□□□□□ -1.82
TMEM116-204ENST00000546962 NEDD1Q8NHV4 660 aa3.71□□□□□ -1.82
TMEM116-204ENST00000546962 TEKT1Q969V4 418 aa3.71□□□□□ -1.82
TMEM116-204ENST00000546962 MFSD14AQ96MC6 490 aa3.71□□□□□ -1.82
TMEM116-204ENST00000546962 CDC6Q99741 560 aa3.71□□□□□ -1.82
TMEM116-204ENST00000546962 MRIQ9BWK5 157 aa3.71□□□□□ -1.82
TMEM116-204ENST00000546962 MRPL18Q9H0U6 180 aaKnown RBP3.71□□□□□ -1.82
TMEM116-204ENST00000546962 IRF2BPLQ9H1B7 796 aa3.71□□□□□ -1.82
TMEM116-204ENST00000546962 MTIF3Q9H2K0 278 aaKnown RBP3.71□□□□□ -1.82
TMEM116-204ENST00000546962 PIDD1Q9HB75 910 aa3.71□□□□□ -1.82
TMEM116-204ENST00000546962 NCOA5Q9HCD5 579 aaKnown RBP3.71□□□□□ -1.82
TMEM116-204ENST00000546962 METTL14Q9HCE5 456 aaKnown RBP3.71□□□□□ -1.82
TMEM116-204ENST00000546962 PDLIM7Q9NR12 457 aa3.71□□□□□ -1.82
TMEM116-204ENST00000546962 DDX56Q9NY93 547 aaKnown RBP3.71□□□□□ -1.82
TMEM116-204ENST00000546962 CHPF2Q9P2E5 772 aa3.71□□□□□ -1.82
TMEM116-204ENST00000546962 LRP2BPQ9P2M1 347 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms