RNA–Protein interactions for RNA: ENST00000546820.5

PTCH1-213, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 864 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-213ENST00000546820 STBD1O95210 358 aa15.38■□□□□ 0.05
PTCH1-213ENST00000546820 CYP2C9P11712 490 aa15.38■□□□□ 0.05
PTCH1-213ENST00000546820 CDC25AP30304 524 aa15.38■□□□□ 0.05
PTCH1-213ENST00000546820 ME1P48163 572 aa15.38■□□□□ 0.05
PTCH1-213ENST00000546820 ZRSR1Q15695 479 aaKnown RBP15.38■□□□□ 0.05
PTCH1-213ENST00000546820 MTERF2Q49AM1 385 aa15.38■□□□□ 0.05
PTCH1-213ENST00000546820 XKR9Q5GH70 373 aa15.38■□□□□ 0.05
PTCH1-213ENST00000546820 MARCH8Q5T0T0 291 aa15.38■□□□□ 0.05
PTCH1-213ENST00000546820 ANO5Q75V66 913 aa15.38■□□□□ 0.05
PTCH1-213ENST00000546820 CABP7Q86V35 215 aa15.38■□□□□ 0.05
PTCH1-213ENST00000546820 NME8Q8N427 588 aa15.38■□□□□ 0.05
PTCH1-213ENST00000546820 ZNF579Q8NAF0 562 aaKnown RBP15.38■□□□□ 0.05
PTCH1-213ENST00000546820 RASSF8Q8NHQ8 419 aa15.38■□□□□ 0.05
PTCH1-213ENST00000546820 SPATA32Q96LK8 384 aa15.38■□□□□ 0.05
PTCH1-213ENST00000546820 CSRNP2Q9H175 543 aa15.38■□□□□ 0.05
PTCH1-213ENST00000546820 HIPK3Q9H422 1215 aa15.38■□□□□ 0.05
PTCH1-213ENST00000546820 PDLIM7Q9NR12 457 aa15.38■□□□□ 0.05
PTCH1-213ENST00000546820 CYP26B1Q9NR63 512 aa15.38■□□□□ 0.05
PTCH1-213ENST00000546820 CCDC39Q9UFE4 941 aa15.38■□□□□ 0.05
PTCH1-213ENST00000546820 DNM3Q9UQ16 869 aa15.38■□□□□ 0.05
PTCH1-213ENST00000546820 BRCA2P51587 3418 aa15.37■□□□□ 0.05
PTCH1-213ENST00000546820 SMIM35A0A1B0GVV1 85 aa15.37■□□□□ 0.05
PTCH1-213ENST00000546820 PP2D1A8MPX8 630 aa15.37■□□□□ 0.05
PTCH1-213ENST00000546820 CAND2O75155 1236 aa15.37■□□□□ 0.05
PTCH1-213ENST00000546820 TIMP1P01033 207 aa15.37■□□□□ 0.05
PTCH1-213ENST00000546820 DNM2P50570 870 aa15.37■□□□□ 0.05
PTCH1-213ENST00000546820 HIC1Q14526 733 aa15.37■□□□□ 0.05
PTCH1-213ENST00000546820 TARBP2Q15633 366 aaKnown RBP15.37■□□□□ 0.05
PTCH1-213ENST00000546820 METTL13Q8N6R0 699 aa15.37■□□□□ 0.05
PTCH1-213ENST00000546820 TRAPPC12Q8WVT3 735 aa15.37■□□□□ 0.05
PTCH1-213ENST00000546820 LBHD1Q9BQE6 289 aaPredicted RBP15.37■□□□□ 0.05
PTCH1-213ENST00000546820 CCSER1Q9C0I3 900 aa15.37■□□□□ 0.05
PTCH1-213ENST00000546820 DDX19AQ9NUU7 478 aaKnown RBP15.37■□□□□ 0.05
PTCH1-213ENST00000546820 WRAP73Q9P2S5 460 aaPredicted RBP15.37■□□□□ 0.05
PTCH1-213ENST00000546820 DBR1Q9UK59 544 aaKnown RBP15.37■□□□□ 0.05
PTCH1-213ENST00000546820 TBX21Q9UL17 535 aa15.37■□□□□ 0.05
PTCH1-213ENST00000546820 WDR81Q562E7 1941 aa15.37■□□□□ 0.05
PTCH1-213ENST00000546820 TRIM43BA6NCK2 446 aa15.36■□□□□ 0.05
PTCH1-213ENST00000546820 ZBTB42B2RXF5 422 aa15.36■□□□□ 0.05
PTCH1-213ENST00000546820 PITPNM1O00562 1244 aa15.36■□□□□ 0.05
PTCH1-213ENST00000546820 PARNO95453 639 aaKnown RBP15.36■□□□□ 0.05
PTCH1-213ENST00000546820 THPOP40225 353 aa15.36■□□□□ 0.05
PTCH1-213ENST00000546820 RFC5P40937 340 aa15.36■□□□□ 0.05
PTCH1-213ENST00000546820 POLGP54098 1239 aaPredicted RBP15.36■□□□□ 0.05
PTCH1-213ENST00000546820 CDC42EP1Q00587 391 aa15.36■□□□□ 0.05
PTCH1-213ENST00000546820 HYIQ5T013 277 aa15.36■□□□□ 0.05
PTCH1-213ENST00000546820 EFCAB12Q6NXP0 572 aa15.36■□□□□ 0.05
PTCH1-213ENST00000546820 POTEGQ6S5H5 508 aa15.36■□□□□ 0.05
PTCH1-213ENST00000546820 SH3RF1Q7Z6J0 888 aa15.36■□□□□ 0.05
PTCH1-213ENST00000546820 RPAINQ86UA6 219 aa15.36■□□□□ 0.05
PTCH1-213ENST00000546820 ZNF710Q8N1W2 664 aa15.36■□□□□ 0.05
PTCH1-213ENST00000546820 TMEM199Q8N511 208 aa15.36■□□□□ 0.05
PTCH1-213ENST00000546820 PIGOQ8TEQ8 1089 aa15.36■□□□□ 0.05
PTCH1-213ENST00000546820 SLC7A3Q8WY07 619 aa15.36■□□□□ 0.05
PTCH1-213ENST00000546820 TRIM43Q96BQ3 446 aaPredicted RBP15.36■□□□□ 0.05
PTCH1-213ENST00000546820 CLIC6Q96NY7 704 aa15.36■□□□□ 0.05
PTCH1-213ENST00000546820 MMTAG2Q9BU76 263 aaKnown RBP15.36■□□□□ 0.05
PTCH1-213ENST00000546820 NOC4LQ9BVI4 516 aaKnown RBP15.36■□□□□ 0.05
PTCH1-213ENST00000546820 SUGCTQ9HAC7 445 aa15.36■□□□□ 0.05
PTCH1-213ENST00000546820 MYH15Q9Y2K3 1946 aa15.35■□□□□ 0.05
PTCH1-213ENST00000546820 ARHGEF35A5YM69 484 aa15.35■□□□□ 0.05
PTCH1-213ENST00000546820 M0QZ92 97 aa15.35■□□□□ 0.05
PTCH1-213ENST00000546820 ZBTB39O15060 712 aa15.35■□□□□ 0.05
PTCH1-213ENST00000546820 GAS2O43903 313 aaKnown RBP15.35■□□□□ 0.05
PTCH1-213ENST00000546820 NPEPPSP55786 919 aa15.35■□□□□ 0.05
PTCH1-213ENST00000546820 GRIN1Q05586 938 aa15.35■□□□□ 0.05
PTCH1-213ENST00000546820 RBL2Q08999 1139 aa15.35■□□□□ 0.05
PTCH1-213ENST00000546820 IER5Q5VY09 327 aa15.35■□□□□ 0.05
PTCH1-213ENST00000546820 PLA2G4FQ68DD2 849 aa15.35■□□□□ 0.05
PTCH1-213ENST00000546820 MFSD5Q6N075 450 aa15.35■□□□□ 0.05
PTCH1-213ENST00000546820 LEO1Q8WVC0 666 aaPredicted RBP15.35■□□□□ 0.05
PTCH1-213ENST00000546820 DNAJB3Q8WWF6 145 aa15.35■□□□□ 0.05
PTCH1-213ENST00000546820 CTAGE1Q96RT6 745 aa15.35■□□□□ 0.05
PTCH1-213ENST00000546820 PPP1R12CQ9BZL4 782 aa15.35■□□□□ 0.05
PTCH1-213ENST00000546820 ZMYND8Q9ULU4 1186 aaPredicted RBP15.35■□□□□ 0.05
PTCH1-213ENST00000546820 PCDHA7Q9UN72 937 aa15.35■□□□□ 0.05
PTCH1-213ENST00000546820 TRIP12Q14669 1992 aaPredicted RBP15.35■□□□□ 0.05
PTCH1-213ENST00000546820 TMEM150BA6NC51 233 aa15.34■□□□□ 0.05
PTCH1-213ENST00000546820 MAFO75444 373 aaPredicted RBP15.34■□□□□ 0.05
PTCH1-213ENST00000546820 DGAT1O75907 488 aa15.34■□□□□ 0.05
PTCH1-213ENST00000546820 C22orf31O95567 290 aa15.34■□□□□ 0.05
PTCH1-213ENST00000546820 EYA4O95677 639 aa15.34■□□□□ 0.05
PTCH1-213ENST00000546820 CKBP12277 381 aa15.34■□□□□ 0.05
PTCH1-213ENST00000546820 SELPP16109 830 aa15.34■□□□□ 0.05
PTCH1-213ENST00000546820 SYN1P17600 705 aa15.34■□□□□ 0.05
PTCH1-213ENST00000546820 RARRES1P49788 294 aa15.34■□□□□ 0.05
PTCH1-213ENST00000546820 ECM1Q16610 540 aa15.34■□□□□ 0.05
PTCH1-213ENST00000546820 CSPP1Q1MSJ5 1256 aa15.34■□□□□ 0.05
PTCH1-213ENST00000546820 SPECC1Q5M775 1068 aa15.34■□□□□ 0.05
PTCH1-213ENST00000546820 RRAGBQ5VZM2 374 aa15.34■□□□□ 0.05
PTCH1-213ENST00000546820 RUFY4Q6ZNE9 571 aa15.34■□□□□ 0.05
PTCH1-213ENST00000546820 TCP11Q8WWU5 503 aa15.34■□□□□ 0.05
PTCH1-213ENST00000546820 SYMPKQ92797 1274 aaKnown RBP15.34■□□□□ 0.05
PTCH1-213ENST00000546820 EPSTI1Q96J88 318 aa15.34■□□□□ 0.05
PTCH1-213ENST00000546820 MAP7D2Q96T17 732 aa15.34■□□□□ 0.05
PTCH1-213ENST00000546820 SH2D3AQ9BRG2 576 aa15.34■□□□□ 0.05
PTCH1-213ENST00000546820 FAM49AQ9H0Q0 323 aaPredicted RBP15.34■□□□□ 0.05
PTCH1-213ENST00000546820 FAM13BQ9NYF5 915 aa15.34■□□□□ 0.05
PTCH1-213ENST00000546820 A0A087WWV3 80 aa15.33■□□□□ 0.04
PTCH1-213ENST00000546820 GOLGA6L4A6NEF3 574 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms