RNA–Protein interactions for RNA: ENST00000546812.1

SSH1-205, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-205ENST00000546812 NFX1Q12986 1120 aaKnown RBP10.64□□□□□ -0.71
SSH1-205ENST00000546812 NMIQ13287 307 aaPredicted RBP10.64□□□□□ -0.71
SSH1-205ENST00000546812 PCNX4Q63HM2 1172 aa10.64□□□□□ -0.71
SSH1-205ENST00000546812 SLC24A5Q71RS6 500 aa10.64□□□□□ -0.71
SSH1-205ENST00000546812 NLRX1Q86UT6 975 aa10.64□□□□□ -0.71
SSH1-205ENST00000546812 HOMER1Q86YM7 354 aa10.64□□□□□ -0.71
SSH1-205ENST00000546812 PLCD3Q8N3E9 789 aa10.64□□□□□ -0.71
SSH1-205ENST00000546812 TDRD5Q8NAT2 981 aaKnown RBP10.64□□□□□ -0.71
SSH1-205ENST00000546812 DTWD2Q8NBA8 298 aa10.64□□□□□ -0.71
SSH1-205ENST00000546812 CNTNAP3BQ96NU0 1288 aa10.64□□□□□ -0.71
SSH1-205ENST00000546812 PIGSQ96S52 555 aa10.64□□□□□ -0.71
SSH1-205ENST00000546812 RTP3Q9BQQ7 232 aa10.64□□□□□ -0.71
SSH1-205ENST00000546812 CNTNAP3Q9BZ76 1288 aa10.64□□□□□ -0.71
SSH1-205ENST00000546812 CWH43Q9H720 699 aa10.64□□□□□ -0.71
SSH1-205ENST00000546812 ENTPD7Q9NQZ7 604 aa10.64□□□□□ -0.71
SSH1-205ENST00000546812 RGS18Q9NS28 235 aa10.64□□□□□ -0.71
SSH1-205ENST00000546812 C1orf112Q9NSG2 853 aa10.64□□□□□ -0.71
SSH1-205ENST00000546812 DLL3Q9NYJ7 618 aa10.64□□□□□ -0.71
SSH1-205ENST00000546812 HCSTQ9UBK5 93 aa10.64□□□□□ -0.71
SSH1-205ENST00000546812 MAD2L2Q9UI95 211 aa10.64□□□□□ -0.71
SSH1-205ENST00000546812 USTQ9Y2C2 406 aa10.64□□□□□ -0.71
SSH1-205ENST00000546812 PCDHA2Q9Y5H9 948 aa10.64□□□□□ -0.71
SSH1-205ENST00000546812 PNMA6FA0A0J9YX94 578 aa10.63□□□□□ -0.71
SSH1-205ENST00000546812 MGEA5O60502 916 aa10.63□□□□□ -0.71
SSH1-205ENST00000546812 ATP9AO75110 1047 aa10.63□□□□□ -0.71
SSH1-205ENST00000546812 ARP10275 920 aa10.63□□□□□ -0.71
SSH1-205ENST00000546812 KCNA2P16389 499 aa10.63□□□□□ -0.71
SSH1-205ENST00000546812 KRT76Q01546 638 aa10.63□□□□□ -0.71
SSH1-205ENST00000546812 TMEM266Q2M3C6 531 aa10.63□□□□□ -0.71
SSH1-205ENST00000546812 SLC35G1Q2M3R5 365 aa10.63□□□□□ -0.71
SSH1-205ENST00000546812 IFIT1BQ5T764 474 aaKnown RBP10.63□□□□□ -0.71
SSH1-205ENST00000546812 TMC7Q7Z402 723 aa10.63□□□□□ -0.71
SSH1-205ENST00000546812 NME8Q8N427 588 aa10.63□□□□□ -0.71
SSH1-205ENST00000546812 MRPL43Q8N983 215 aaKnown RBP10.63□□□□□ -0.71
SSH1-205ENST00000546812 TNPO1Q92973 898 aaKnown RBP10.63□□□□□ -0.71
SSH1-205ENST00000546812 ADAM2Q99965 735 aa10.63□□□□□ -0.71
SSH1-205ENST00000546812 UBAC1Q9BSL1 405 aa10.63□□□□□ -0.71
SSH1-205ENST00000546812 RIOX1Q9H6W3 641 aa10.63□□□□□ -0.71
SSH1-205ENST00000546812 ERVK-5Q9HDB9 667 aa10.63□□□□□ -0.71
SSH1-205ENST00000546812 HCFC2Q9Y5Z7 792 aa10.63□□□□□ -0.71
SSH1-205ENST00000546812 CFAP47Q6ZTR5 3102 aa10.62□□□□□ -0.71
SSH1-205ENST00000546812 DENND3A2RUS2 1198 aa10.62□□□□□ -0.71
SSH1-205ENST00000546812 C9IYK1 514 aa10.62□□□□□ -0.71
SSH1-205ENST00000546812 WEE2P0C1S8 567 aa10.62□□□□□ -0.71
SSH1-205ENST00000546812 PDE1AP54750 535 aa10.62□□□□□ -0.71
SSH1-205ENST00000546812 MFAP1P55081 439 aaKnown RBP10.62□□□□□ -0.71
SSH1-205ENST00000546812 FAM189BP81408 668 aa10.62□□□□□ -0.71
SSH1-205ENST00000546812 KRT17Q04695 432 aa10.62□□□□□ -0.71
SSH1-205ENST00000546812 ATAT1Q5SQI0 421 aa10.62□□□□□ -0.71
SSH1-205ENST00000546812 PLEKHM2Q8IWE5 1019 aa10.62□□□□□ -0.71
SSH1-205ENST00000546812 GPRASP2Q96D09 838 aa10.62□□□□□ -0.71
SSH1-205ENST00000546812 CDHR1Q96JP9 859 aa10.62□□□□□ -0.71
SSH1-205ENST00000546812 ATP6V0A4Q9HBG4 840 aa10.62□□□□□ -0.71
SSH1-205ENST00000546812 CYP26B1Q9NR63 512 aa10.62□□□□□ -0.71
SSH1-205ENST00000546812 TMEM161AQ9NX61 479 aa10.62□□□□□ -0.71
SSH1-205ENST00000546812 DBR1Q9UK59 544 aaKnown RBP10.62□□□□□ -0.71
SSH1-205ENST00000546812 MYO10Q9HD67 2058 aa10.62□□□□□ -0.71
SSH1-205ENST00000546812 SPTBN2O15020 2390 aa10.61□□□□□ -0.71
SSH1-205ENST00000546812 LAMA4Q16363 1823 aa10.61□□□□□ -0.71
SSH1-205ENST00000546812 OTOGLQ3ZCN5 2332 aa10.61□□□□□ -0.71
SSH1-205ENST00000546812 SMIM35A0A1B0GVV1 85 aa10.61□□□□□ -0.71
SSH1-205ENST00000546812 C2orf71A6NGG8 1288 aa10.61□□□□□ -0.71
SSH1-205ENST00000546812 CYTH3O43739 400 aa10.61□□□□□ -0.71
SSH1-205ENST00000546812 CLASP2O75122 1294 aaKnown RBP10.61□□□□□ -0.71
SSH1-205ENST00000546812 EOMESO95936 686 aa10.61□□□□□ -0.71
SSH1-205ENST00000546812 FGFR1P11362 822 aa10.61□□□□□ -0.71
SSH1-205ENST00000546812 ITGB5P18084 799 aa10.61□□□□□ -0.71
SSH1-205ENST00000546812 PPM1AP35813 382 aa10.61□□□□□ -0.71
SSH1-205ENST00000546812 TDGQ13569 410 aa10.61□□□□□ -0.71
SSH1-205ENST00000546812 SMC1AQ14683 1233 aaKnown RBP10.61□□□□□ -0.71
SSH1-205ENST00000546812 SEC23AQ15436 765 aa10.61□□□□□ -0.71
SSH1-205ENST00000546812 RARS2Q5T160 578 aaKnown RBP10.61□□□□□ -0.71
SSH1-205ENST00000546812 KIAA1841Q6NSI8 718 aa10.61□□□□□ -0.71
SSH1-205ENST00000546812 KCNT2Q6UVM3 1135 aa10.61□□□□□ -0.71
SSH1-205ENST00000546812 LRRC55Q6ZSA7 311 aa10.61□□□□□ -0.71
SSH1-205ENST00000546812 CYP2W1Q8TAV3 490 aa10.61□□□□□ -0.71
SSH1-205ENST00000546812 PCYT2Q99447 389 aa10.61□□□□□ -0.71
SSH1-205ENST00000546812 KRT23Q9C075 422 aa10.61□□□□□ -0.71
SSH1-205ENST00000546812 ELAC1Q9H777 363 aaKnown RBP10.61□□□□□ -0.71
SSH1-205ENST00000546812 SPG21Q9NZD8 308 aa10.61□□□□□ -0.71
SSH1-205ENST00000546812 NOC2LQ9Y3T9 749 aaKnown RBP10.61□□□□□ -0.71
SSH1-205ENST00000546812 GPR179Q6PRD1 2367 aa10.61□□□□□ -0.71
SSH1-205ENST00000546812 CHD8Q9HCK8 2581 aa10.6□□□□□ -0.71
SSH1-205ENST00000546812 PIK3CDO00329 1044 aa10.6□□□□□ -0.71
SSH1-205ENST00000546812 GPR182O15218 404 aa10.6□□□□□ -0.71
SSH1-205ENST00000546812 RPS6KA5O75582 802 aa10.6□□□□□ -0.71
SSH1-205ENST00000546812 GRM4Q14833 912 aa10.6□□□□□ -0.71
SSH1-205ENST00000546812 PLCB4Q15147 1175 aa10.6□□□□□ -0.71
SSH1-205ENST00000546812 ODR4Q5SWX8 454 aa10.6□□□□□ -0.71
SSH1-205ENST00000546812 USP17L6PQ6QN14 398 aa10.6□□□□□ -0.71
SSH1-205ENST00000546812 SIX5Q8N196 739 aa10.6□□□□□ -0.71
SSH1-205ENST00000546812 C12orf76Q8N812 135 aaPredicted RBP10.6□□□□□ -0.71
SSH1-205ENST00000546812 SMARCC2Q8TAQ2 1214 aa10.6□□□□□ -0.71
SSH1-205ENST00000546812 TRAPPC12Q8WVT3 735 aa10.6□□□□□ -0.71
SSH1-205ENST00000546812 RUBCNQ92622 972 aa10.6□□□□□ -0.71
SSH1-205ENST00000546812 CUL5Q93034 780 aa10.6□□□□□ -0.71
SSH1-205ENST00000546812 ACSF2Q96CM8 615 aaPredicted RBP10.6□□□□□ -0.71
SSH1-205ENST00000546812 ZNF558Q96NG5 402 aa10.6□□□□□ -0.71
SSH1-205ENST00000546812 CASD1Q96PB1 797 aa10.6□□□□□ -0.71
SSH1-205ENST00000546812 TMEM117Q9H0C3 514 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms