RNA–Protein interactions for RNA: ENST00000546803.5

CCDC38-203, Transcript of coiled-coil domain containing 38, humanhuman

TSL 4

Gene CCDC38, Length 511 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-203ENST00000546803 EXOC8Q8IYI6 725 aa18.81■□□□□ 0.6
CCDC38-203ENST00000546803 DNAJB3Q8WWF6 145 aa18.81■□□□□ 0.6
CCDC38-203ENST00000546803 SCLYQ96I15 445 aa18.81■□□□□ 0.6
CCDC38-203ENST00000546803 JPH2Q9BR39 696 aaPredicted RBP18.81■□□□□ 0.6
CCDC38-203ENST00000546803 IL23AQ9NPF7 189 aa18.81■□□□□ 0.6
CCDC38-203ENST00000546803 CYP26B1Q9NR63 512 aa18.81■□□□□ 0.6
CCDC38-203ENST00000546803 ANKEF1Q9NU02 776 aa18.81■□□□□ 0.6
CCDC38-203ENST00000546803 PCDH10Q9P2E7 1040 aa18.81■□□□□ 0.6
CCDC38-203ENST00000546803 CLIC4Q9Y696 253 aa18.81■□□□□ 0.6
CCDC38-203ENST00000546803 MORC2Q9Y6X9 1032 aaPredicted RBP18.81■□□□□ 0.6
CCDC38-203ENST00000546803 A0A1W2PPC1 479 aa18.8■□□□□ 0.6
CCDC38-203ENST00000546803 MED24O75448 989 aa18.8■□□□□ 0.6
CCDC38-203ENST00000546803 BRD1O95696 1058 aa18.8■□□□□ 0.6
CCDC38-203ENST00000546803 TMOD1P28289 359 aa18.8■□□□□ 0.6
CCDC38-203ENST00000546803 PKP1Q13835 747 aa18.8■□□□□ 0.6
CCDC38-203ENST00000546803 PTPAQ15257 358 aa18.8■□□□□ 0.6
CCDC38-203ENST00000546803 FOXD4L5Q5VV16 416 aaPredicted RBP18.8■□□□□ 0.6
CCDC38-203ENST00000546803 IER5Q5VY09 327 aa18.8■□□□□ 0.6
CCDC38-203ENST00000546803 KRT79Q5XKE5 535 aa18.8■□□□□ 0.6
CCDC38-203ENST00000546803 ATL3Q6DD88 541 aa18.8■□□□□ 0.6
CCDC38-203ENST00000546803 TRAF7Q6Q0C0 670 aa18.8■□□□□ 0.6
CCDC38-203ENST00000546803 ZNF710Q8N1W2 664 aa18.8■□□□□ 0.6
CCDC38-203ENST00000546803 FOXD4L4Q8WXT5 416 aaPredicted RBP18.8■□□□□ 0.6
CCDC38-203ENST00000546803 ZBTB10Q96DT7 871 aa18.8■□□□□ 0.6
CCDC38-203ENST00000546803 CEP170P1Q96L14 293 aa18.8■□□□□ 0.6
CCDC38-203ENST00000546803 AK8Q96MA6 479 aa18.8■□□□□ 0.6
CCDC38-203ENST00000546803 CEP89Q96ST8 783 aa18.8■□□□□ 0.6
CCDC38-203ENST00000546803 FAM49AQ9H0Q0 323 aaPredicted RBP18.8■□□□□ 0.6
CCDC38-203ENST00000546803 VWA3AA6NCI4 1184 aa18.79■□□□□ 0.6
CCDC38-203ENST00000546803 ANP32AP39687 249 aaKnown RBP18.79■□□□□ 0.6
CCDC38-203ENST00000546803 CCT6AP40227 531 aaKnown RBP18.79■□□□□ 0.6
CCDC38-203ENST00000546803 NASPP49321 788 aaPredicted RBP18.79■□□□□ 0.6
CCDC38-203ENST00000546803 PLA2G4FQ68DD2 849 aa18.79■□□□□ 0.6
CCDC38-203ENST00000546803 EFCAB12Q6NXP0 572 aa18.79■□□□□ 0.6
CCDC38-203ENST00000546803 PSRC1Q6PGN9 363 aaPredicted RBP18.79■□□□□ 0.6
CCDC38-203ENST00000546803 KIAA0319LQ8IZA0 1049 aa18.79■□□□□ 0.6
CCDC38-203ENST00000546803 METTL13Q8N6R0 699 aa18.79■□□□□ 0.6
CCDC38-203ENST00000546803 SNX29Q8TEQ0 813 aa18.79■□□□□ 0.6
CCDC38-203ENST00000546803 NACC1Q96RE7 527 aa18.79■□□□□ 0.6
CCDC38-203ENST00000546803 USP28Q96RU2 1077 aa18.79■□□□□ 0.6
CCDC38-203ENST00000546803 FTOQ9C0B1 505 aaKnown RBP eCLIP18.79■□□□□ 0.6
CCDC38-203ENST00000546803 PDE4DIPQ5VU43 2346 aa18.79■□□□□ 0.6
CCDC38-203ENST00000546803 IGKV6-21A0A0C4DH24 114 aa18.78■□□□□ 0.6
CCDC38-203ENST00000546803 TMEM150BA6NC51 233 aa18.78■□□□□ 0.6
CCDC38-203ENST00000546803 M0QZ92 97 aa18.78■□□□□ 0.6
CCDC38-203ENST00000546803 SLC26A4O43511 780 aa18.78■□□□□ 0.6
CCDC38-203ENST00000546803 CTSHP09668 335 aa18.78■□□□□ 0.6
CCDC38-203ENST00000546803 LONP1P36776 959 aaKnown RBP18.78■□□□□ 0.6
CCDC38-203ENST00000546803 RFC5P40937 340 aa18.78■□□□□ 0.6
CCDC38-203ENST00000546803 EPHB4P54760 987 aa18.78■□□□□ 0.6
CCDC38-203ENST00000546803 NPEPPSP55786 919 aa18.78■□□□□ 0.6
CCDC38-203ENST00000546803 MRPS6P82932 125 aaKnown RBP18.78■□□□□ 0.6
CCDC38-203ENST00000546803 SLC39A14Q15043 492 aa18.78■□□□□ 0.6
CCDC38-203ENST00000546803 XKR9Q5GH70 373 aa18.78■□□□□ 0.6
CCDC38-203ENST00000546803 LINC01465Q8N7H1 131 aa18.78■□□□□ 0.6
CCDC38-203ENST00000546803 MAP7D2Q96T17 732 aa18.78■□□□□ 0.6
CCDC38-203ENST00000546803 COLQQ9Y215 455 aaPredicted RBP18.78■□□□□ 0.6
CCDC38-203ENST00000546803 GAS2O43903 313 aaKnown RBP18.77■□□□□ 0.6
CCDC38-203ENST00000546803 MAFO75444 373 aaPredicted RBP18.77■□□□□ 0.6
CCDC38-203ENST00000546803 CHRNA1P02708 482 aa18.77■□□□□ 0.6
CCDC38-203ENST00000546803 CXCL10P02778 98 aa18.77■□□□□ 0.6
CCDC38-203ENST00000546803 DNM2P50570 870 aa18.77■□□□□ 0.6
CCDC38-203ENST00000546803 CEBPZQ03701 1054 aaKnown RBP18.77■□□□□ 0.6
CCDC38-203ENST00000546803 MGAT3Q09327 533 aa18.77■□□□□ 0.6
CCDC38-203ENST00000546803 TMEM240Q5SV17 173 aa18.77■□□□□ 0.6
CCDC38-203ENST00000546803 C16orf59Q7L2K0 433 aa18.77■□□□□ 0.6
CCDC38-203ENST00000546803 DEFB128Q7Z7B8 93 aa18.77■□□□□ 0.6
CCDC38-203ENST00000546803 TDHQ8IZJ6 230 aa18.77■□□□□ 0.6
CCDC38-203ENST00000546803 KCTD17Q8N5Z5 321 aa18.77■□□□□ 0.6
CCDC38-203ENST00000546803 SLC7A3Q8WY07 619 aa18.77■□□□□ 0.6
CCDC38-203ENST00000546803 CCDC43Q96MW1 224 aaKnown RBP18.77■□□□□ 0.6
CCDC38-203ENST00000546803 DHX33Q9H6R0 707 aaKnown RBP18.77■□□□□ 0.6
CCDC38-203ENST00000546803 SUGCTQ9HAC7 445 aa18.77■□□□□ 0.6
CCDC38-203ENST00000546803 DAXXQ9UER7 740 aaPredicted RBP18.77■□□□□ 0.6
CCDC38-203ENST00000546803 DBR1Q9UK59 544 aaKnown RBP18.77■□□□□ 0.6
CCDC38-203ENST00000546803 SRPRBQ9Y5M8 271 aaKnown RBP18.77■□□□□ 0.6
CCDC38-203ENST00000546803 PP2D1A8MPX8 630 aa18.76■□□□□ 0.59
CCDC38-203ENST00000546803 ZBTB39O15060 712 aa18.76■□□□□ 0.59
CCDC38-203ENST00000546803 NBNO60934 754 aa18.76■□□□□ 0.59
CCDC38-203ENST00000546803 YEATS4O95619 227 aa18.76■□□□□ 0.59
CCDC38-203ENST00000546803 FGBP02675 491 aa18.76■□□□□ 0.59
CCDC38-203ENST00000546803 ACRP10323 421 aa18.76■□□□□ 0.59
CCDC38-203ENST00000546803 ACTN1P12814 892 aa18.76■□□□□ 0.59
CCDC38-203ENST00000546803 RARRES1P49788 294 aa18.76■□□□□ 0.59
CCDC38-203ENST00000546803 CLCN3P51790 818 aa18.76■□□□□ 0.59
CCDC38-203ENST00000546803 POLGP54098 1239 aaPredicted RBP18.76■□□□□ 0.59
CCDC38-203ENST00000546803 CDC42EP1Q00587 391 aa18.76■□□□□ 0.59
CCDC38-203ENST00000546803 GPNMBQ14956 572 aa18.76■□□□□ 0.59
CCDC38-203ENST00000546803 STK38Q15208 465 aa18.76■□□□□ 0.59
CCDC38-203ENST00000546803 POTEGQ6S5H5 508 aa18.76■□□□□ 0.59
CCDC38-203ENST00000546803 ZNF365Q70YC5 407 aa18.76■□□□□ 0.59
CCDC38-203ENST00000546803 LRRC71Q8N4P6 559 aa18.76■□□□□ 0.59
CCDC38-203ENST00000546803 PIGOQ8TEQ8 1089 aa18.76■□□□□ 0.59
CCDC38-203ENST00000546803 VWCEQ96DN2 955 aa18.76■□□□□ 0.59
CCDC38-203ENST00000546803 SH2D3AQ9BRG2 576 aa18.76■□□□□ 0.59
CCDC38-203ENST00000546803 CELF4Q9BZC1 486 aaKnown RBP18.76■□□□□ 0.59
CCDC38-203ENST00000546803 MTIF3Q9H2K0 278 aaKnown RBP18.76■□□□□ 0.59
CCDC38-203ENST00000546803 TFIP11Q9UBB9 837 aaKnown RBP18.76■□□□□ 0.59
CCDC38-203ENST00000546803 ATP6V1DQ9Y5K8 247 aa18.76■□□□□ 0.59
CCDC38-203ENST00000546803 TRPV2Q9Y5S1 764 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms