RNA–Protein interactions for RNA: ENST00000546378.1

HOXC11-202, Transcript of homeobox C11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC11, Length 3,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-202ENST00000546378 USP17L10C9JJH3 530 aa15.98■□□□□ 0.15
HOXC11-202ENST00000546378 TRAPPC10P48553 1259 aa15.98■□□□□ 0.15
HOXC11-202ENST00000546378 TUBB4BP68371 445 aa15.98■□□□□ 0.15
HOXC11-202ENST00000546378 MAP2K1Q02750 393 aaPredicted RBP15.98■□□□□ 0.15
HOXC11-202ENST00000546378 CRAMP1Q96RY5 1269 aa15.98■□□□□ 0.15
HOXC11-202ENST00000546378 SCAF8Q9UPN6 1271 aaKnown RBP15.98■□□□□ 0.15
HOXC11-202ENST00000546378 SIK3Q9Y2K2 1263 aa15.98■□□□□ 0.15
HOXC11-202ENST00000546378 PIAS1O75925 651 aa15.98■□□□□ 0.15
HOXC11-202ENST00000546378 KIF4AO95239 1232 aa15.98■□□□□ 0.15
HOXC11-202ENST00000546378 FKBP3Q00688 224 aaKnown RBP15.98■□□□□ 0.15
HOXC11-202ENST00000546378 FAM47EQ6ZV65 393 aa15.98■□□□□ 0.15
HOXC11-202ENST00000546378 MMGT1Q8N4V1 131 aa15.98■□□□□ 0.15
HOXC11-202ENST00000546378 METTL13Q8N6R0 699 aa15.98■□□□□ 0.15
HOXC11-202ENST00000546378 PNMA5Q96PV4 448 aa15.98■□□□□ 0.15
HOXC11-202ENST00000546378 EMILIN3Q9NT22 766 aa15.98■□□□□ 0.15
HOXC11-202ENST00000546378 ATP6V0A2Q9Y487 856 aa15.98■□□□□ 0.15
HOXC11-202ENST00000546378 CCDC172P0C7W6 258 aa15.97■□□□□ 0.15
HOXC11-202ENST00000546378 ZC2HC1CQ53FD0 456 aaPredicted RBP15.97■□□□□ 0.15
HOXC11-202ENST00000546378 KRT25Q7Z3Z0 450 aa15.97■□□□□ 0.15
HOXC11-202ENST00000546378 RGL1Q9NZL6 768 aa15.97■□□□□ 0.15
HOXC11-202ENST00000546378 HDAC9Q9UKV0 1011 aa15.97■□□□□ 0.15
HOXC11-202ENST00000546378 CAND2O75155 1236 aa15.97■□□□□ 0.15
HOXC11-202ENST00000546378 BAG3O95817 575 aa15.97■□□□□ 0.15
HOXC11-202ENST00000546378 PLCG2P16885 1265 aa15.97■□□□□ 0.15
HOXC11-202ENST00000546378 ZNF571Q7Z3V5 609 aaPredicted RBP15.97■□□□□ 0.15
HOXC11-202ENST00000546378 PRPF38AQ8NAV1 312 aaKnown RBP15.97■□□□□ 0.15
HOXC11-202ENST00000546378 PRCCQ92733 491 aaPredicted RBP15.97■□□□□ 0.15
HOXC11-202ENST00000546378 AZI2Q9H6S1 392 aa15.97■□□□□ 0.15
HOXC11-202ENST00000546378 DDX20Q9UHI6 824 aaKnown RBP15.97■□□□□ 0.15
HOXC11-202ENST00000546378 SUFUQ9UMX1 484 aa15.97■□□□□ 0.15
HOXC11-202ENST00000546378 SPEF2Q9C093 1822 aa15.97■□□□□ 0.15
HOXC11-202ENST00000546378 COL5A3P25940 1745 aaPredicted RBP15.97■□□□□ 0.15
HOXC11-202ENST00000546378 DNM1LO00429 736 aa15.97■□□□□ 0.15
HOXC11-202ENST00000546378 CETN3O15182 167 aa15.97■□□□□ 0.15
HOXC11-202ENST00000546378 PAX7P23759 505 aa15.97■□□□□ 0.15
HOXC11-202ENST00000546378 MESDQ14696 234 aa15.97■□□□□ 0.15
HOXC11-202ENST00000546378 SP8Q8IXZ3 490 aa15.97■□□□□ 0.15
HOXC11-202ENST00000546378 MYBP10242 640 aa15.96■□□□□ 0.15
HOXC11-202ENST00000546378 IFI35P80217 286 aaPredicted RBP15.96■□□□□ 0.15
HOXC11-202ENST00000546378 EXOC3L4Q17RC7 722 aa15.96■□□□□ 0.15
HOXC11-202ENST00000546378 CPNE8Q86YQ8 564 aa15.96■□□□□ 0.15
HOXC11-202ENST00000546378 TPH2Q8IWU9 490 aa15.96■□□□□ 0.15
HOXC11-202ENST00000546378 BAP1Q92560 729 aa15.96■□□□□ 0.15
HOXC11-202ENST00000546378 RAPGEF5Q92565 580 aa15.96■□□□□ 0.15
HOXC11-202ENST00000546378 RAB34Q9BZG1 259 aa15.96■□□□□ 0.15
HOXC11-202ENST00000546378 GCNT4Q9P109 453 aa15.96■□□□□ 0.15
HOXC11-202ENST00000546378 ARMCX3Q9UH62 379 aaPredicted RBP15.96■□□□□ 0.15
HOXC11-202ENST00000546378 GMNCA6NCL1 334 aa15.96■□□□□ 0.15
HOXC11-202ENST00000546378 RBAK-RBAKDNI3L0D1 243 aa15.96■□□□□ 0.15
HOXC11-202ENST00000546378 HOXA10P31260 410 aaPredicted RBP15.96■□□□□ 0.15
HOXC11-202ENST00000546378 ACCSLQ4AC99 568 aa15.96■□□□□ 0.15
HOXC11-202ENST00000546378 SFR1Q86XK3 245 aa15.96■□□□□ 0.15
HOXC11-202ENST00000546378 PLA2G4BP0C869 781 aa15.95■□□□□ 0.14
HOXC11-202ENST00000546378 KCNB1Q14721 858 aa15.95■□□□□ 0.14
HOXC11-202ENST00000546378 PPP2R5BQ15173 497 aa15.95■□□□□ 0.14
HOXC11-202ENST00000546378 C12orf60Q5U649 245 aa15.95■□□□□ 0.14
HOXC11-202ENST00000546378 ALS2CLQ60I27 953 aa15.95■□□□□ 0.14
HOXC11-202ENST00000546378 SLC17A8Q8NDX2 589 aa15.95■□□□□ 0.14
HOXC11-202ENST00000546378 CYP2W1Q8TAV3 490 aa15.95■□□□□ 0.14
HOXC11-202ENST00000546378 MICAL1Q8TDZ2 1067 aa15.95■□□□□ 0.14
HOXC11-202ENST00000546378 PWWP2AQ96N64 755 aa15.95■□□□□ 0.14
HOXC11-202ENST00000546378 POP1Q99575 1024 aaKnown RBP15.95■□□□□ 0.14
HOXC11-202ENST00000546378 PRMT1Q99873 361 aaKnown RBP15.95■□□□□ 0.14
HOXC11-202ENST00000546378 MTFR1LQ9H019 292 aa15.95■□□□□ 0.14
HOXC11-202ENST00000546378 BHMT2Q9H2M3 363 aa15.95■□□□□ 0.14
HOXC11-202ENST00000546378 UTP11Q9Y3A2 253 aaKnown RBP15.95■□□□□ 0.14
HOXC11-202ENST00000546378 LGR5O75473 907 aa15.95■□□□□ 0.14
HOXC11-202ENST00000546378 LDHCP07864 332 aa15.95■□□□□ 0.14
HOXC11-202ENST00000546378 RASA1P20936 1047 aa15.95■□□□□ 0.14
HOXC11-202ENST00000546378 GNAQP50148 359 aa15.95■□□□□ 0.14
HOXC11-202ENST00000546378 CTTNQ14247 550 aaKnown RBP15.95■□□□□ 0.14
HOXC11-202ENST00000546378 DAB2IPQ5VWQ8 1189 aa15.95■□□□□ 0.14
HOXC11-202ENST00000546378 UNC13DQ70J99 1090 aa15.95■□□□□ 0.14
HOXC11-202ENST00000546378 HVCN1Q96D96 273 aa15.95■□□□□ 0.14
HOXC11-202ENST00000546378 SEC16BQ96JE7 1060 aa15.95■□□□□ 0.14
HOXC11-202ENST00000546378 ERGIC2Q96RQ1 377 aa15.95■□□□□ 0.14
HOXC11-202ENST00000546378 CCSER1Q9C0I3 900 aa15.95■□□□□ 0.14
HOXC11-202ENST00000546378 TAF1DQ9H5J8 278 aaPredicted RBP15.95■□□□□ 0.14
HOXC11-202ENST00000546378 CTTNBP2NLQ9P2B4 639 aa15.95■□□□□ 0.14
HOXC11-202ENST00000546378 GSTTP1A0A1W2PQM5 241 aa15.95■□□□□ 0.14
HOXC11-202ENST00000546378 H0Y3Z8 333 aa15.95■□□□□ 0.14
HOXC11-202ENST00000546378 SERPING1P05155 500 aa15.95■□□□□ 0.14
HOXC11-202ENST00000546378 HMGB2P26583 209 aaKnown RBP15.95■□□□□ 0.14
HOXC11-202ENST00000546378 SESN3P58005 492 aa15.95■□□□□ 0.14
HOXC11-202ENST00000546378 SP4Q02446 784 aa15.95■□□□□ 0.14
HOXC11-202ENST00000546378 SNCBQ16143 134 aa15.95■□□□□ 0.14
HOXC11-202ENST00000546378 GKAP1Q5VSY0 366 aaPredicted RBP15.95■□□□□ 0.14
HOXC11-202ENST00000546378 ZKSCAN4Q969J2 545 aaPredicted RBP15.95■□□□□ 0.14
HOXC11-202ENST00000546378 ATP8A2Q9NTI2 1148 aa15.95■□□□□ 0.14
HOXC11-202ENST00000546378 TRIM33Q9UPN9 1127 aa15.95■□□□□ 0.14
HOXC11-202ENST00000546378 DDX60Q8IY21 1712 aaKnown RBP15.94■□□□□ 0.14
HOXC11-202ENST00000546378 MMEP08473 750 aa15.94■□□□□ 0.14
HOXC11-202ENST00000546378 XRCC5P13010 732 aaKnown RBP15.94■□□□□ 0.14
HOXC11-202ENST00000546378 AKR1B1P15121 316 aa15.94■□□□□ 0.14
HOXC11-202ENST00000546378 COG2Q14746 738 aa15.94■□□□□ 0.14
HOXC11-202ENST00000546378 AOC3Q16853 763 aa15.94■□□□□ 0.14
HOXC11-202ENST00000546378 SYCP3Q8IZU3 236 aa15.94■□□□□ 0.14
HOXC11-202ENST00000546378 USP38Q8NB14 1042 aa15.94■□□□□ 0.14
HOXC11-202ENST00000546378 ANKS1AQ92625 1134 aa15.94■□□□□ 0.14
HOXC11-202ENST00000546378 RAD54LQ92698 747 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms