RNA–Protein interactions for RNA: ENST00000546296.5

LTBR-215, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 783 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-215ENST00000546296 PARNO95453 639 aaKnown RBP18.82■□□□□ 0.6
LTBR-215ENST00000546296 C22orf31O95567 290 aa18.82■□□□□ 0.6
LTBR-215ENST00000546296 ACRP10323 421 aa18.82■□□□□ 0.6
LTBR-215ENST00000546296 TMOD1P28289 359 aa18.82■□□□□ 0.6
LTBR-215ENST00000546296 YWHABP31946 246 aaKnown RBP18.82■□□□□ 0.6
LTBR-215ENST00000546296 CCT6AP40227 531 aaKnown RBP18.82■□□□□ 0.6
LTBR-215ENST00000546296 EPHB4P54760 987 aa18.82■□□□□ 0.6
LTBR-215ENST00000546296 IL17AQ16552 155 aa18.82■□□□□ 0.6
LTBR-215ENST00000546296 HAUS3Q68CZ6 603 aa18.82■□□□□ 0.6
LTBR-215ENST00000546296 PLA2G4FQ68DD2 849 aa18.82■□□□□ 0.6
LTBR-215ENST00000546296 ANO5Q75V66 913 aa18.82■□□□□ 0.6
LTBR-215ENST00000546296 CEP170P1Q96L14 293 aa18.82■□□□□ 0.6
LTBR-215ENST00000546296 CCDC43Q96MW1 224 aaKnown RBP18.82■□□□□ 0.6
LTBR-215ENST00000546296 POLR3CQ9BUI4 534 aaPredicted RBP18.82■□□□□ 0.6
LTBR-215ENST00000546296 SUGCTQ9HAC7 445 aa18.82■□□□□ 0.6
LTBR-215ENST00000546296 TUFT1Q9NNX1 390 aa18.82■□□□□ 0.6
LTBR-215ENST00000546296 M0QZ92 97 aa18.81■□□□□ 0.6
LTBR-215ENST00000546296 MED24O75448 989 aa18.81■□□□□ 0.6
LTBR-215ENST00000546296 LYPLA2O95372 231 aa18.81■□□□□ 0.6
LTBR-215ENST00000546296 F13A1P00488 732 aa18.81■□□□□ 0.6
LTBR-215ENST00000546296 NPEPPSP55786 919 aa18.81■□□□□ 0.6
LTBR-215ENST00000546296 PKP1Q13835 747 aa18.81■□□□□ 0.6
LTBR-215ENST00000546296 TARBP2Q15633 366 aaKnown RBP18.81■□□□□ 0.6
LTBR-215ENST00000546296 FOXD4L6Q3SYB3 417 aaPredicted RBP18.81■□□□□ 0.6
LTBR-215ENST00000546296 XKR9Q5GH70 373 aa18.81■□□□□ 0.6
LTBR-215ENST00000546296 IER5Q5VY09 327 aa18.81■□□□□ 0.6
LTBR-215ENST00000546296 KRT79Q5XKE5 535 aa18.81■□□□□ 0.6
LTBR-215ENST00000546296 EFCAB12Q6NXP0 572 aa18.81■□□□□ 0.6
LTBR-215ENST00000546296 FOXD4L3Q6VB84 417 aaPredicted RBP18.81■□□□□ 0.6
LTBR-215ENST00000546296 RPAINQ86UA6 219 aa18.81■□□□□ 0.6
LTBR-215ENST00000546296 CATSPER3Q86XQ3 398 aa18.81■□□□□ 0.6
LTBR-215ENST00000546296 NME8Q8N427 588 aa18.81■□□□□ 0.6
LTBR-215ENST00000546296 IGSF22Q8N9C0 903 aa18.81■□□□□ 0.6
LTBR-215ENST00000546296 CYP26B1Q9NR63 512 aa18.81■□□□□ 0.6
LTBR-215ENST00000546296 ZBTB39O15060 712 aa18.8■□□□□ 0.6
LTBR-215ENST00000546296 FGBP02675 491 aa18.8■□□□□ 0.6
LTBR-215ENST00000546296 SPATA31C1P0DKV0 1188 aa18.8■□□□□ 0.6
LTBR-215ENST00000546296 RPA1P27694 616 aa18.8■□□□□ 0.6
LTBR-215ENST00000546296 DNM2P50570 870 aa18.8■□□□□ 0.6
LTBR-215ENST00000546296 TMEM62Q0P6H9 643 aa18.8■□□□□ 0.6
LTBR-215ENST00000546296 PSRC1Q6PGN9 363 aaPredicted RBP18.8■□□□□ 0.6
LTBR-215ENST00000546296 EXOC8Q8IYI6 725 aa18.8■□□□□ 0.6
LTBR-215ENST00000546296 KIAA0319LQ8IZA0 1049 aa18.8■□□□□ 0.6
LTBR-215ENST00000546296 SNX29Q8TEQ0 813 aa18.8■□□□□ 0.6
LTBR-215ENST00000546296 NACC1Q96RE7 527 aa18.8■□□□□ 0.6
LTBR-215ENST00000546296 JPH2Q9BR39 696 aaPredicted RBP18.8■□□□□ 0.6
LTBR-215ENST00000546296 ANKEF1Q9NU02 776 aa18.8■□□□□ 0.6
LTBR-215ENST00000546296 TFIP11Q9UBB9 837 aaKnown RBP18.8■□□□□ 0.6
LTBR-215ENST00000546296 A0A087WWV3 80 aa18.79■□□□□ 0.6
LTBR-215ENST00000546296 PP2D1A8MPX8 630 aa18.79■□□□□ 0.6
LTBR-215ENST00000546296 PFKMP08237 780 aa18.79■□□□□ 0.6
LTBR-215ENST00000546296 ANP32AP39687 249 aaKnown RBP18.79■□□□□ 0.6
LTBR-215ENST00000546296 CLCN3P51790 818 aa18.79■□□□□ 0.6
LTBR-215ENST00000546296 MRPS6P82932 125 aaKnown RBP18.79■□□□□ 0.6
LTBR-215ENST00000546296 SHHQ15465 462 aa18.79■□□□□ 0.6
LTBR-215ENST00000546296 ZRSR1Q15695 479 aaKnown RBP18.79■□□□□ 0.6
LTBR-215ENST00000546296 FAM26DQ5JW98 314 aa18.79■□□□□ 0.6
LTBR-215ENST00000546296 TRAF7Q6Q0C0 670 aa18.79■□□□□ 0.6
LTBR-215ENST00000546296 ZNF365Q70YC5 407 aa18.79■□□□□ 0.6
LTBR-215ENST00000546296 C16orf59Q7L2K0 433 aa18.79■□□□□ 0.6
LTBR-215ENST00000546296 TDHQ8IZJ6 230 aa18.79■□□□□ 0.6
LTBR-215ENST00000546296 LRRC71Q8N4P6 559 aa18.79■□□□□ 0.6
LTBR-215ENST00000546296 ZNF579Q8NAF0 562 aaKnown RBP18.79■□□□□ 0.6
LTBR-215ENST00000546296 PIGOQ8TEQ8 1089 aa18.79■□□□□ 0.6
LTBR-215ENST00000546296 SLC7A3Q8WY07 619 aa18.79■□□□□ 0.6
LTBR-215ENST00000546296 USP28Q96RU2 1077 aa18.79■□□□□ 0.6
LTBR-215ENST00000546296 MAP7D2Q96T17 732 aa18.79■□□□□ 0.6
LTBR-215ENST00000546296 PRO3102Q9H379 93 aa18.79■□□□□ 0.6
LTBR-215ENST00000546296 AKT3Q9Y243 479 aa18.79■□□□□ 0.6
LTBR-215ENST00000546296 PPME1Q9Y570 386 aa18.79■□□□□ 0.6
LTBR-215ENST00000546296 CDY2AQ9Y6F7 541 aa18.79■□□□□ 0.6
LTBR-215ENST00000546296 NBNO60934 754 aa18.78■□□□□ 0.6
LTBR-215ENST00000546296 CHRNA1P02708 482 aa18.78■□□□□ 0.6
LTBR-215ENST00000546296 ACTN1P12814 892 aa18.78■□□□□ 0.6
LTBR-215ENST00000546296 XRCC6P12956 609 aaKnown RBP eCLIP18.78■□□□□ 0.6
LTBR-215ENST00000546296 MARCKSP29966 332 aaPredicted RBP18.78■□□□□ 0.6
LTBR-215ENST00000546296 CDC25AP30304 524 aa18.78■□□□□ 0.6
LTBR-215ENST00000546296 RFC5P40937 340 aa18.78■□□□□ 0.6
LTBR-215ENST00000546296 POLGP54098 1239 aaPredicted RBP18.78■□□□□ 0.6
LTBR-215ENST00000546296 STK38Q15208 465 aa18.78■□□□□ 0.6
LTBR-215ENST00000546296 PTPAQ15257 358 aa18.78■□□□□ 0.6
LTBR-215ENST00000546296 TMEM240Q5SV17 173 aa18.78■□□□□ 0.6
LTBR-215ENST00000546296 C9orf50Q5SZB4 431 aa18.78■□□□□ 0.6
LTBR-215ENST00000546296 POTEGQ6S5H5 508 aa18.78■□□□□ 0.6
LTBR-215ENST00000546296 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.78■□□□□ 0.62e-6■■■■□ 22
LTBR-215ENST00000546296 KIAA1024Q9UPX6 916 aa18.78■□□□□ 0.6
LTBR-215ENST00000546296 GINS2Q9Y248 185 aa18.78■□□□□ 0.6
LTBR-215ENST00000546296 TRPV2Q9Y5S1 764 aa18.78■□□□□ 0.6
LTBR-215ENST00000546296 MYH9P35579 1960 aaKnown RBP18.77■□□□□ 0.6
LTBR-215ENST00000546296 LTBP2Q14767 1821 aa18.77■□□□□ 0.6
LTBR-215ENST00000546296 MAFO75444 373 aaPredicted RBP18.77■□□□□ 0.6
LTBR-215ENST00000546296 BRD1O95696 1058 aa18.77■□□□□ 0.6
LTBR-215ENST00000546296 VTNP04004 478 aa18.77■□□□□ 0.6
LTBR-215ENST00000546296 MUTP22033 750 aa18.77■□□□□ 0.6
LTBR-215ENST00000546296 MBTPS1Q14703 1052 aa18.77■□□□□ 0.6
LTBR-215ENST00000546296 OTOP2Q7RTS6 562 aa18.77■□□□□ 0.6
LTBR-215ENST00000546296 RNPC3Q96LT9 517 aaKnown RBP18.77■□□□□ 0.6
LTBR-215ENST00000546296 AK8Q96MA6 479 aa18.77■□□□□ 0.6
LTBR-215ENST00000546296 CEP89Q96ST8 783 aa18.77■□□□□ 0.6
LTBR-215ENST00000546296 PPP1R16BQ96T49 567 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms