RNA–Protein interactions for RNA: ENST00000546215.5

SCARB1-211, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARB1, Length 1,597 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-211ENST00000546215 NOC4LQ9BVI4 516 aaKnown RBP23.26■■□□□ 1.31
SCARB1-211ENST00000546215 PRKAG2Q9UGJ0 569 aa23.26■■□□□ 1.31
SCARB1-211ENST00000546215 PPP6R2O75170 966 aa23.25■■□□□ 1.31
SCARB1-211ENST00000546215 TRIM71Q2Q1W2 868 aaKnown RBP23.25■■□□□ 1.31
SCARB1-211ENST00000546215 PLA2G4FQ68DD2 849 aa23.25■■□□□ 1.31
SCARB1-211ENST00000546215 POTEGQ6S5H5 508 aa23.25■■□□□ 1.31
SCARB1-211ENST00000546215 RUFY4Q6ZNE9 571 aa23.25■■□□□ 1.31
SCARB1-211ENST00000546215 CLIC6Q96NY7 704 aa23.25■■□□□ 1.31
SCARB1-211ENST00000546215 IPO9Q96P70 1041 aaKnown RBP23.25■■□□□ 1.31
SCARB1-211ENST00000546215 CSRNP2Q9H175 543 aa23.25■■□□□ 1.31
SCARB1-211ENST00000546215 HIPK3Q9H422 1215 aa23.25■■□□□ 1.31
SCARB1-211ENST00000546215 TCHHQ07283 1943 aa23.25■■□□□ 1.31
SCARB1-211ENST00000546215 C22orf31O95567 290 aa23.24■■□□□ 1.31
SCARB1-211ENST00000546215 NPEPPSP55786 919 aa23.24■■□□□ 1.31
SCARB1-211ENST00000546215 RBL2Q08999 1139 aa23.24■■□□□ 1.31
SCARB1-211ENST00000546215 MTERF2Q49AM1 385 aa23.24■■□□□ 1.31
SCARB1-211ENST00000546215 OTUD6AQ7L8S5 288 aa23.24■■□□□ 1.31
SCARB1-211ENST00000546215 KRI1Q8N9T8 703 aaKnown RBP23.24■■□□□ 1.31
SCARB1-211ENST00000546215 ZNF579Q8NAF0 562 aaKnown RBP23.24■■□□□ 1.31
SCARB1-211ENST00000546215 RCOR1Q9UKL0 485 aa23.24■■□□□ 1.31
SCARB1-211ENST00000546215 PCDHA2Q9Y5H9 948 aa23.24■■□□□ 1.31
SCARB1-211ENST00000546215 UMODL1Q5DID0 1318 aa23.24■■□□□ 1.31
SCARB1-211ENST00000546215 A0A087WWV3 80 aa23.23■■□□□ 1.31
SCARB1-211ENST00000546215 TIMP1P01033 207 aa23.23■■□□□ 1.31
SCARB1-211ENST00000546215 XRCC6P12956 609 aaKnown RBP eCLIP23.23■■□□□ 1.31
SCARB1-211ENST00000546215 RAG1P15918 1043 aa23.23■■□□□ 1.31
SCARB1-211ENST00000546215 TAF2Q6P1X5 1199 aa23.23■■□□□ 1.31
SCARB1-211ENST00000546215 CAGE1Q8TC20 777 aa23.23■■□□□ 1.31
SCARB1-211ENST00000546215 PIGOQ8TEQ8 1089 aa23.23■■□□□ 1.31
SCARB1-211ENST00000546215 PPP1R12CQ9BZL4 782 aa23.23■■□□□ 1.31
SCARB1-211ENST00000546215 CYP26B1Q9NR63 512 aa23.23■■□□□ 1.31
SCARB1-211ENST00000546215 ANKEF1Q9NU02 776 aa23.23■■□□□ 1.31
SCARB1-211ENST00000546215 EVPLQ92817 2033 aa23.23■■□□□ 1.31
SCARB1-211ENST00000546215 PITPNM1O00562 1244 aa23.23■■□□□ 1.31
SCARB1-211ENST00000546215 KRT85P78386 507 aa23.23■■□□□ 1.31
SCARB1-211ENST00000546215 BFSP2Q13515 415 aa23.23■■□□□ 1.31
SCARB1-211ENST00000546215 HYIQ5T013 277 aa23.23■■□□□ 1.31
SCARB1-211ENST00000546215 RPAINQ86UA6 219 aa23.23■■□□□ 1.31
SCARB1-211ENST00000546215 KCNG4Q8TDN1 519 aa23.23■■□□□ 1.31
SCARB1-211ENST00000546215 CEP170P1Q96L14 293 aa23.23■■□□□ 1.31
SCARB1-211ENST00000546215 NACC1Q96RE7 527 aa23.23■■□□□ 1.31
SCARB1-211ENST00000546215 KIAA1024Q9UPX6 916 aa23.23■■□□□ 1.31
SCARB1-211ENST00000546215 SMIM35A0A1B0GVV1 85 aa23.22■■□□□ 1.31
SCARB1-211ENST00000546215 H0YGN5 161 aa23.22■■□□□ 1.31
SCARB1-211ENST00000546215 MAGEB2O15479 319 aa23.22■■□□□ 1.31
SCARB1-211ENST00000546215 CKBP12277 381 aa23.22■■□□□ 1.31
SCARB1-211ENST00000546215 CYP2C18P33260 490 aa23.22■■□□□ 1.31
SCARB1-211ENST00000546215 SPECC1Q5M775 1068 aa23.22■■□□□ 1.31
SCARB1-211ENST00000546215 DDX19AQ9NUU7 478 aaKnown RBP23.22■■□□□ 1.31
SCARB1-211ENST00000546215 PPME1Q9Y570 386 aa23.22■■□□□ 1.31
SCARB1-211ENST00000546215 NCLP19338 710 aaKnown RBP23.21■■□□□ 1.31
SCARB1-211ENST00000546215 UBA7P41226 1012 aa23.21■■□□□ 1.31
SCARB1-211ENST00000546215 RARRES1P49788 294 aa23.21■■□□□ 1.31
SCARB1-211ENST00000546215 TBC1D8BQ0IIM8 1120 aa23.21■■□□□ 1.31
SCARB1-211ENST00000546215 XKR9Q5GH70 373 aa23.21■■□□□ 1.31
SCARB1-211ENST00000546215 USP49Q70CQ1 688 aa23.21■■□□□ 1.31
SCARB1-211ENST00000546215 CABP7Q86V35 215 aa23.21■■□□□ 1.31
SCARB1-211ENST00000546215 CCDC155Q8N6L0 562 aa23.21■■□□□ 1.31
SCARB1-211ENST00000546215 DNAJB3Q8WWF6 145 aa23.21■■□□□ 1.31
SCARB1-211ENST00000546215 EPSTI1Q96J88 318 aa23.21■■□□□ 1.31
SCARB1-211ENST00000546215 PNMA5Q96PV4 448 aa23.21■■□□□ 1.31
SCARB1-211ENST00000546215 CCSER1Q9C0I3 900 aa23.21■■□□□ 1.31
SCARB1-211ENST00000546215 WNT8AQ9H1J5 351 aa23.21■■□□□ 1.31
SCARB1-211ENST00000546215 CHMP5Q9NZZ3 219 aa23.21■■□□□ 1.31
SCARB1-211ENST00000546215 IGKV6-21A0A0C4DH24 114 aa23.2■■□□□ 1.3
SCARB1-211ENST00000546215 SLC26A4O43511 780 aa23.2■■□□□ 1.3
SCARB1-211ENST00000546215 MAFO75444 373 aaPredicted RBP23.2■■□□□ 1.3
SCARB1-211ENST00000546215 THPOP40225 353 aa23.2■■□□□ 1.3
SCARB1-211ENST00000546215 GRB10Q13322 594 aa23.2■■□□□ 1.3
SCARB1-211ENST00000546215 MFSD5Q6N075 450 aa23.2■■□□□ 1.3
SCARB1-211ENST00000546215 KIAA0319LQ8IZA0 1049 aa23.2■■□□□ 1.3
SCARB1-211ENST00000546215 LINC01465Q8N7H1 131 aa23.2■■□□□ 1.3
SCARB1-211ENST00000546215 LEO1Q8WVC0 666 aaPredicted RBP23.2■■□□□ 1.3
SCARB1-211ENST00000546215 FAM49AQ9H0Q0 323 aaPredicted RBP23.2■■□□□ 1.3
SCARB1-211ENST00000546215 DBR1Q9UK59 544 aaKnown RBP23.2■■□□□ 1.3
SCARB1-211ENST00000546215 LTBP2Q14767 1821 aa23.2■■□□□ 1.3
SCARB1-211ENST00000546215 KDM3AQ9Y4C1 1321 aa23.2■■□□□ 1.3
SCARB1-211ENST00000546215 CAND2O75155 1236 aa23.19■■□□□ 1.3
SCARB1-211ENST00000546215 CCL23P55773 120 aa23.19■■□□□ 1.3
SCARB1-211ENST00000546215 ZRSR1Q15695 479 aaKnown RBP23.19■■□□□ 1.3
SCARB1-211ENST00000546215 AXDND1Q5T1B0 1012 aaPredicted RBP23.19■■□□□ 1.3
SCARB1-211ENST00000546215 ZNF618Q5T7W0 954 aa23.19■■□□□ 1.3
SCARB1-211ENST00000546215 EFCAB12Q6NXP0 572 aa23.19■■□□□ 1.3
SCARB1-211ENST00000546215 TRAF7Q6Q0C0 670 aa23.19■■□□□ 1.3
SCARB1-211ENST00000546215 METTL13Q8N6R0 699 aa23.19■■□□□ 1.3
SCARB1-211ENST00000546215 SYMPKQ92797 1274 aaKnown RBP23.19■■□□□ 1.3
SCARB1-211ENST00000546215 BADQ92934 168 aa23.19■■□□□ 1.3
SCARB1-211ENST00000546215 DHX33Q9H6R0 707 aaKnown RBP23.19■■□□□ 1.3
SCARB1-211ENST00000546215 PCDHA7Q9UN72 937 aa23.19■■□□□ 1.3
SCARB1-211ENST00000546215 ARID2Q68CP9 1835 aa23.19■■□□□ 1.3
SCARB1-211ENST00000546215 CUTAO60888 179 aa23.18■■□□□ 1.3
SCARB1-211ENST00000546215 IQCF3P0C7M6 154 aa23.18■■□□□ 1.3
SCARB1-211ENST00000546215 KCNK18Q7Z418 384 aa23.18■■□□□ 1.3
SCARB1-211ENST00000546215 LRRC71Q8N4P6 559 aa23.18■■□□□ 1.3
SCARB1-211ENST00000546215 RETREG2Q8NC44 543 aa23.18■■□□□ 1.3
SCARB1-211ENST00000546215 NT5C3AQ9H0P0 336 aa23.18■■□□□ 1.3
SCARB1-211ENST00000546215 RPLP2P05387 115 aaKnown RBP23.18■■□□□ 1.3
SCARB1-211ENST00000546215 SELPP16109 830 aa23.18■■□□□ 1.3
SCARB1-211ENST00000546215 ME1P48163 572 aa23.18■■□□□ 1.3
SCARB1-211ENST00000546215 CLCN3P51790 818 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms