RNA–Protein interactions for RNA: ENST00000545882.5

CNN3-207, Transcript of calponin 3, humanhuman

TSL 2 BASIC

Gene CNN3, Length 1,902 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-207ENST00000545882 HMGB2P26583 209 aaKnown RBP16.7■□□□□ 0.26
CNN3-207ENST00000545882 MMP14P50281 582 aa16.7■□□□□ 0.26
CNN3-207ENST00000545882 CACNB3P54284 484 aa16.7■□□□□ 0.26
CNN3-207ENST00000545882 PTPROQ16827 1216 aa16.7■□□□□ 0.26
CNN3-207ENST00000545882 SLFN11Q7Z7L1 901 aa16.7■□□□□ 0.26
CNN3-207ENST00000545882 METTL13Q8N6R0 699 aa16.7■□□□□ 0.26
CNN3-207ENST00000545882 PROCA1Q8NCQ7 364 aaPredicted RBP16.7■□□□□ 0.26
CNN3-207ENST00000545882 PPM1EQ8WY54 764 aa16.7■□□□□ 0.26
CNN3-207ENST00000545882 BORCS6Q96GS4 357 aa16.7■□□□□ 0.26
CNN3-207ENST00000545882 TAF1DQ9H5J8 278 aaPredicted RBP16.7■□□□□ 0.26
CNN3-207ENST00000545882 TYW1Q9NV66 732 aaKnown RBP16.7■□□□□ 0.26
CNN3-207ENST00000545882 FBXL5Q9UKA1 691 aa16.7■□□□□ 0.26
CNN3-207ENST00000545882 OPLAHO14841 1288 aa16.7■□□□□ 0.26
CNN3-207ENST00000545882 SREBF1P36956 1147 aa16.7■□□□□ 0.26
CNN3-207ENST00000545882 DCAF17Q5H9S7 520 aaPredicted RBP16.7■□□□□ 0.26
CNN3-207ENST00000545882 SH3BP5LQ7L8J4 393 aa16.7■□□□□ 0.26
CNN3-207ENST00000545882 NLGN1Q8N2Q7 840 aa16.7■□□□□ 0.26
CNN3-207ENST00000545882 C1orf131Q8NDD1 294 aaKnown RBP16.7■□□□□ 0.26
CNN3-207ENST00000545882 ERMNQ8TAM6 284 aa16.7■□□□□ 0.26
CNN3-207ENST00000545882 CYP2W1Q8TAV3 490 aa16.7■□□□□ 0.26
CNN3-207ENST00000545882 TEKT1Q969V4 418 aa16.7■□□□□ 0.26
CNN3-207ENST00000545882 AKT1S1Q96B36 256 aa16.7■□□□□ 0.26
CNN3-207ENST00000545882 ZC3H12CQ9C0D7 883 aaKnown RBP16.7■□□□□ 0.26
CNN3-207ENST00000545882 NEUROG2Q9H2A3 272 aa16.7■□□□□ 0.26
CNN3-207ENST00000545882 IKZF4Q9H2S9 585 aa16.7■□□□□ 0.26
CNN3-207ENST00000545882 SAMM50Q9Y512 469 aa16.7■□□□□ 0.26
CNN3-207ENST00000545882 MYH11P35749 1972 aa16.7■□□□□ 0.26
CNN3-207ENST00000545882 ATP8B3O60423 1300 aa16.69■□□□□ 0.26
CNN3-207ENST00000545882 EML1O00423 815 aa16.69■□□□□ 0.26
CNN3-207ENST00000545882 DDX3XO00571 662 aaKnown RBP eCLIP16.69■□□□□ 0.26
CNN3-207ENST00000545882 CLIC2O15247 247 aa16.69■□□□□ 0.26
CNN3-207ENST00000545882 TGFB1I1O43294 461 aa16.69■□□□□ 0.26
CNN3-207ENST00000545882 CEP104O60308 925 aa16.69■□□□□ 0.26
CNN3-207ENST00000545882 CRKP46108 304 aa16.69■□□□□ 0.26
CNN3-207ENST00000545882 TTC31Q49AM3 519 aaPredicted RBP16.69■□□□□ 0.26
CNN3-207ENST00000545882 TADA2BQ86TJ2 420 aa16.69■□□□□ 0.26
CNN3-207ENST00000545882 DDX42Q86XP3 938 aaKnown RBP eCLIP16.69■□□□□ 0.26
CNN3-207ENST00000545882 AMNQ9BXJ7 453 aa16.69■□□□□ 0.26
CNN3-207ENST00000545882 BHMT2Q9H2M3 363 aa16.69■□□□□ 0.26
CNN3-207ENST00000545882 KCNQ5Q9NR82 932 aa16.69■□□□□ 0.26
CNN3-207ENST00000545882 PLAAQ9Y263 795 aa16.69■□□□□ 0.26
CNN3-207ENST00000545882 SCN9AQ15858 1988 aa16.69■□□□□ 0.26
CNN3-207ENST00000545882 ZMYM2Q9UBW7 1377 aa16.69■□□□□ 0.26
CNN3-207ENST00000545882 SHTN1A0MZ66 631 aa16.68■□□□□ 0.26
CNN3-207ENST00000545882 A6NNZ2 444 aa16.68■□□□□ 0.26
CNN3-207ENST00000545882 H0YGN5 161 aa16.68■□□□□ 0.26
CNN3-207ENST00000545882 SLC16A3O15427 465 aaKnown RBP16.68■□□□□ 0.26
CNN3-207ENST00000545882 CIITAP33076 1130 aa16.68■□□□□ 0.26
CNN3-207ENST00000545882 CYP4A11Q02928 519 aa16.68■□□□□ 0.26
CNN3-207ENST00000545882 TCP10Q12799 353 aa16.68■□□□□ 0.26
CNN3-207ENST00000545882 UAP1Q16222 522 aaPredicted RBP16.68■□□□□ 0.26
CNN3-207ENST00000545882 TUBB8Q3ZCM7 444 aa16.68■□□□□ 0.26
CNN3-207ENST00000545882 CERKLQ49MI3 558 aaPredicted RBP16.68■□□□□ 0.26
CNN3-207ENST00000545882 COL23A1Q86Y22 540 aaPredicted RBP16.68■□□□□ 0.26
CNN3-207ENST00000545882 RASGEF1CQ8N431 466 aa16.68■□□□□ 0.26
CNN3-207ENST00000545882 EIF1ADQ8N9N8 165 aaKnown RBP16.68■□□□□ 0.26
CNN3-207ENST00000545882 ATP6V1G3Q96LB4 118 aa16.68■□□□□ 0.26
CNN3-207ENST00000545882 FAM20AQ96MK3 541 aa16.68■□□□□ 0.26
CNN3-207ENST00000545882 AP1M1Q9BXS5 423 aa16.68■□□□□ 0.26
CNN3-207ENST00000545882 NFS1Q9Y697 457 aa16.68■□□□□ 0.26
CNN3-207ENST00000545882 SLX4Q8IY92 1834 aa16.68■□□□□ 0.26
CNN3-207ENST00000545882 ALDH1B1P30837 517 aa16.68■□□□□ 0.26
CNN3-207ENST00000545882 GUCY1A3Q02108 690 aa16.68■□□□□ 0.26
CNN3-207ENST00000545882 IFI16Q16666 785 aaKnown RBP16.68■□□□□ 0.26
CNN3-207ENST00000545882 KCTD19Q17RG1 926 aaPredicted RBP16.68■□□□□ 0.26
CNN3-207ENST00000545882 USH1GQ495M9 461 aa16.68■□□□□ 0.26
CNN3-207ENST00000545882 LNX1Q8TBB1 728 aaPredicted RBP16.68■□□□□ 0.26
CNN3-207ENST00000545882 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.68■□□□□ 0.263e-6■■□□□ 11.5
CNN3-207ENST00000545882 POLR3CQ9BUI4 534 aaPredicted RBP16.68■□□□□ 0.26
CNN3-207ENST00000545882 TMBIM4Q9HC24 238 aa16.68■□□□□ 0.26
CNN3-207ENST00000545882 METTL14Q9HCE5 456 aaKnown RBP16.68■□□□□ 0.26
CNN3-207ENST00000545882 RGL1Q9NZL6 768 aa16.68■□□□□ 0.26
CNN3-207ENST00000545882 GCNT4Q9P109 453 aa16.68■□□□□ 0.26
CNN3-207ENST00000545882 FAM198AQ9UFP1 575 aa16.68■□□□□ 0.26
CNN3-207ENST00000545882 NOC2LQ9Y3T9 749 aaKnown RBP16.68■□□□□ 0.26
CNN3-207ENST00000545882 A0A0A6YYK5 440 aaPredicted RBP16.67■□□□□ 0.26
CNN3-207ENST00000545882 SFI1A8K8P3 1242 aa16.67■□□□□ 0.26
CNN3-207ENST00000545882 F5H6K3 240 aa16.67■□□□□ 0.26
CNN3-207ENST00000545882 FLOT1O75955 427 aa16.67■□□□□ 0.26
CNN3-207ENST00000545882 GCNT3O95395 438 aa16.67■□□□□ 0.26
CNN3-207ENST00000545882 EYA4O95677 639 aa16.67■□□□□ 0.26
CNN3-207ENST00000545882 ITGA4P13612 1032 aa16.67■□□□□ 0.26
CNN3-207ENST00000545882 NR1D1P20393 614 aa16.67■□□□□ 0.26
CNN3-207ENST00000545882 ANXA13P27216 316 aa16.67■□□□□ 0.26
CNN3-207ENST00000545882 HSD17B3P37058 310 aa16.67■□□□□ 0.26
CNN3-207ENST00000545882 KLRC3Q07444 240 aa16.67■□□□□ 0.26
CNN3-207ENST00000545882 ITGB3BPQ13352 177 aaPredicted RBP16.67■□□□□ 0.26
CNN3-207ENST00000545882 TCERG1LQ5VWI1 586 aa16.67■□□□□ 0.26
CNN3-207ENST00000545882 TATDN1Q6P1N9 297 aa16.67■□□□□ 0.26
CNN3-207ENST00000545882 SLC30A10Q6XR72 485 aa16.67■□□□□ 0.26
CNN3-207ENST00000545882 FBXO11Q86XK2 927 aa16.67■□□□□ 0.26
CNN3-207ENST00000545882 SLC30A5Q8TAD4 765 aa16.67■□□□□ 0.26
CNN3-207ENST00000545882 CALR3Q96L12 384 aaKnown RBP16.67■□□□□ 0.26
CNN3-207ENST00000545882 EIF2AK1Q9BQI3 630 aaKnown RBP16.67■□□□□ 0.26
CNN3-207ENST00000545882 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.67■□□□□ 0.26
CNN3-207ENST00000545882 FAM107BQ9H098 131 aa16.67■□□□□ 0.26
CNN3-207ENST00000545882 DDX47Q9H0S4 455 aaKnown RBP16.67■□□□□ 0.26
CNN3-207ENST00000545882 GTPBP10A4D1E9 387 aaKnown RBP16.66■□□□□ 0.26
CNN3-207ENST00000545882 PGRMC1O00264 195 aaKnown RBP16.66■□□□□ 0.26
CNN3-207ENST00000545882 SART1O43290 800 aaKnown RBP16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms