RNA–Protein interactions for RNA: ENST00000545831.5

NPIPA1-208, Transcript of nuclear pore complex interacting protein family member A1, human

TSL 3

Gene NPIPA1, Length 553 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPIPA1-208	ENST00000545831	ZEB2	O60315	1214 aa		11.15	□□□□□ -0.62
NPIPA1-208	ENST00000545831	HBP1	O60381	514 aa		11.15	□□□□□ -0.62
NPIPA1-208	ENST00000545831	RHOBTB3	O94955	611 aa		11.15	□□□□□ -0.62
NPIPA1-208	ENST00000545831	FAM13A	O94988	1023 aa		11.15	□□□□□ -0.62
NPIPA1-208	ENST00000545831	STBD1	O95210	358 aa		11.15	□□□□□ -0.62
NPIPA1-208	ENST00000545831	LGALS2	P05162	132 aa		11.15	□□□□□ -0.62
NPIPA1-208	ENST00000545831	MMP3	P08254	477 aa		11.15	□□□□□ -0.62
NPIPA1-208	ENST00000545831	RARB	P10826	455 aa		11.15	□□□□□ -0.62
NPIPA1-208	ENST00000545831	PRKAR2A	P13861	404 aa	Known RBP	11.15	□□□□□ -0.62
NPIPA1-208	ENST00000545831	GUCY2C	P25092	1073 aa		11.15	□□□□□ -0.62
NPIPA1-208	ENST00000545831	GRK4	P32298	578 aa		11.15	□□□□□ -0.62
NPIPA1-208	ENST00000545831	PPP1R2	P41236	205 aa		11.15	□□□□□ -0.62
NPIPA1-208	ENST00000545831	NPEPPS	P55786	919 aa		11.15	□□□□□ -0.62
NPIPA1-208	ENST00000545831	GIT2	Q14161	759 aa		11.15	□□□□□ -0.62
NPIPA1-208	ENST00000545831	GSE1	Q14687	1217 aa		11.15	□□□□□ -0.62
NPIPA1-208	ENST00000545831	ARSH	Q5FYA8	562 aa		11.15	□□□□□ -0.62
NPIPA1-208	ENST00000545831	ZNF658	Q5TYW1	1059 aa	Predicted RBP	11.15	□□□□□ -0.62
NPIPA1-208	ENST00000545831	C1orf186	Q6ZWK4	172 aa		11.15	□□□□□ -0.62
NPIPA1-208	ENST00000545831	ANO5	Q75V66	913 aa		11.15	□□□□□ -0.62
NPIPA1-208	ENST00000545831	EXOC8	Q8IYI6	725 aa		11.15	□□□□□ -0.62
NPIPA1-208	ENST00000545831	TRPV1	Q8NER1	839 aa		11.15	□□□□□ -0.62
NPIPA1-208	ENST00000545831	DNAJC19	Q96DA6	116 aa		11.15	□□□□□ -0.62
NPIPA1-208	ENST00000545831	RUSC1	Q9BVN2	902 aa		11.15	□□□□□ -0.62
NPIPA1-208	ENST00000545831	NIFK	Q9BYG3	293 aa	Known RBP	11.15	□□□□□ -0.62
NPIPA1-208	ENST00000545831	ZHX3	Q9H4I2	956 aa		11.15	□□□□□ -0.62
NPIPA1-208	ENST00000545831	CYP26B1	Q9NR63	512 aa		11.15	□□□□□ -0.62
NPIPA1-208	ENST00000545831	ODF2L	Q9ULJ1	636 aa		11.15	□□□□□ -0.62
NPIPA1-208	ENST00000545831	COL4A3BP	Q9Y5P4	624 aa		11.15	□□□□□ -0.62
NPIPA1-208	ENST00000545831	CASP8AP2	Q9UKL3	1982 aa		11.14	□□□□□ -0.63
NPIPA1-208	ENST00000545831	NPHP3-ACAD11	A0A0J9YXS1	232 aa		11.14	□□□□□ -0.63
NPIPA1-208	ENST00000545831		A6NJR5	290 aa		11.14	□□□□□ -0.63
NPIPA1-208	ENST00000545831	KPNA6	O60684	536 aa		11.14	□□□□□ -0.63
NPIPA1-208	ENST00000545831	USO1	O60763	962 aa	Known RBP	11.14	□□□□□ -0.63
NPIPA1-208	ENST00000545831	DGAT1	O75907	488 aa		11.14	□□□□□ -0.63
NPIPA1-208	ENST00000545831	GAP43	P17677	238 aa		11.14	□□□□□ -0.63
NPIPA1-208	ENST00000545831	ATP4A	P20648	1035 aa		11.14	□□□□□ -0.63
NPIPA1-208	ENST00000545831	PTGS1	P23219	599 aa		11.14	□□□□□ -0.63
NPIPA1-208	ENST00000545831	MARK3	P27448	753 aa		11.14	□□□□□ -0.63
NPIPA1-208	ENST00000545831	RAD51AP2	Q09MP3	1159 aa		11.14	□□□□□ -0.63
NPIPA1-208	ENST00000545831	TRIM32	Q13049	653 aa		11.14	□□□□□ -0.63
NPIPA1-208	ENST00000545831	STIM1	Q13586	685 aa		11.14	□□□□□ -0.63
NPIPA1-208	ENST00000545831	MTERF2	Q49AM1	385 aa		11.14	□□□□□ -0.63
NPIPA1-208	ENST00000545831	ANO6	Q4KMQ2	910 aa		11.14	□□□□□ -0.63
NPIPA1-208	ENST00000545831	HERC4	Q5GLZ8	1057 aa	Predicted RBP	11.14	□□□□□ -0.63
NPIPA1-208	ENST00000545831	CT47A1	Q5JQC4	288 aa	Predicted RBP	11.14	□□□□□ -0.63
NPIPA1-208	ENST00000545831	PLA2G4F	Q68DD2	849 aa		11.14	□□□□□ -0.63
NPIPA1-208	ENST00000545831	ATP8B4	Q8TF62	1192 aa		11.14	□□□□□ -0.63
NPIPA1-208	ENST00000545831	REEP2	Q9BRK0	252 aa		11.14	□□□□□ -0.63
NPIPA1-208	ENST00000545831	SEL1L	Q9UBV2	794 aa		11.14	□□□□□ -0.63
NPIPA1-208	ENST00000545831	TRPC6	Q9Y210	931 aa		11.14	□□□□□ -0.63
NPIPA1-208	ENST00000545831	DOCK5	Q9H7D0	1870 aa		11.14	□□□□□ -0.63
NPIPA1-208	ENST00000545831	TMEM150B	A6NC51	233 aa		11.13	□□□□□ -0.63
NPIPA1-208	ENST00000545831	GOLGA6L3	A6NEY3	463 aa		11.13	□□□□□ -0.63
NPIPA1-208	ENST00000545831		H3BRB1	525 aa		11.13	□□□□□ -0.63
NPIPA1-208	ENST00000545831	ADCY6	O43306	1168 aa		11.13	□□□□□ -0.63
NPIPA1-208	ENST00000545831	MSC	O60682	206 aa		11.13	□□□□□ -0.63
NPIPA1-208	ENST00000545831	KIF20A	O95235	890 aa		11.13	□□□□□ -0.63
NPIPA1-208	ENST00000545831	C6orf222	P0C671	652 aa	Predicted RBP	11.13	□□□□□ -0.63
NPIPA1-208	ENST00000545831	HOXD8	P13378	290 aa	Predicted RBP	11.13	□□□□□ -0.63
NPIPA1-208	ENST00000545831	CCND3	P30281	292 aa	Predicted RBP	11.13	□□□□□ -0.63
NPIPA1-208	ENST00000545831	RFC5	P40937	340 aa		11.13	□□□□□ -0.63
NPIPA1-208	ENST00000545831	ZNF165	P49910	485 aa		11.13	□□□□□ -0.63
NPIPA1-208	ENST00000545831	POLG	P54098	1239 aa	Predicted RBP	11.13	□□□□□ -0.63
NPIPA1-208	ENST00000545831	GJA9	P57773	515 aa		11.13	□□□□□ -0.63
NPIPA1-208	ENST00000545831	CACNB1	Q02641	598 aa	Predicted RBP	11.13	□□□□□ -0.63
NPIPA1-208	ENST00000545831	COASY	Q13057	564 aa		11.13	□□□□□ -0.63
NPIPA1-208	ENST00000545831	PLCB4	Q15147	1175 aa		11.13	□□□□□ -0.63
NPIPA1-208	ENST00000545831	DPCR1	Q3MIW9	517 aa		11.13	□□□□□ -0.63
NPIPA1-208	ENST00000545831	ZNF484	Q5JVG2	852 aa		11.13	□□□□□ -0.63
NPIPA1-208	ENST00000545831	MAP3K21	Q5TCX8	1036 aa		11.13	□□□□□ -0.63
NPIPA1-208	ENST00000545831	GAS2L3	Q86XJ1	694 aa		11.13	□□□□□ -0.63
NPIPA1-208	ENST00000545831	TRIM50	Q86XT4	487 aa		11.13	□□□□□ -0.63
NPIPA1-208	ENST00000545831	MYCT1	Q8N699	235 aa		11.13	□□□□□ -0.63
NPIPA1-208	ENST00000545831	MCPH1	Q8NEM0	835 aa		11.13	□□□□□ -0.63
NPIPA1-208	ENST00000545831	SLC7A3	Q8WY07	619 aa		11.13	□□□□□ -0.63
NPIPA1-208	ENST00000545831	DRC1	Q96MC2	740 aa		11.13	□□□□□ -0.63
NPIPA1-208	ENST00000545831	JPH2	Q9BR39	696 aa	Predicted RBP	11.13	□□□□□ -0.63
NPIPA1-208	ENST00000545831	SH2D3A	Q9BRG2	576 aa		11.13	□□□□□ -0.63
NPIPA1-208	ENST00000545831	UPF3A	Q9H1J1	476 aa	Known RBP	11.13	□□□□□ -0.63
NPIPA1-208	ENST00000545831	DNAJC25	Q9H1X3	360 aa		11.13	□□□□□ -0.63
NPIPA1-208	ENST00000545831	TUT1	Q9H6E5	874 aa	Known RBP	11.13	□□□□□ -0.63
NPIPA1-208	ENST00000545831	ATP6V0A4	Q9HBG4	840 aa		11.13	□□□□□ -0.63
NPIPA1-208	ENST00000545831	PARVG	Q9HBI0	331 aa		11.13	□□□□□ -0.63
NPIPA1-208	ENST00000545831	HMX1	Q9NP08	348 aa	Predicted RBP	11.13	□□□□□ -0.63
NPIPA1-208	ENST00000545831	LARS	Q9P2J5	1176 aa	Known RBP	11.13	□□□□□ -0.63
NPIPA1-208	ENST00000545831	KCNG1	Q9UIX4	513 aa		11.13	□□□□□ -0.63
NPIPA1-208	ENST00000545831	PTPN22	Q9Y2R2	807 aa		11.13	□□□□□ -0.63
NPIPA1-208	ENST00000545831	PTCH2	Q9Y6C5	1203 aa		11.13	□□□□□ -0.63
NPIPA1-208	ENST00000545831	LOXHD1	Q8IVV2	1947 aa		11.12	□□□□□ -0.63
NPIPA1-208	ENST00000545831	FRMD3	A2A2Y4	597 aa		11.12	□□□□□ -0.63
NPIPA1-208	ENST00000545831	SMTNL1	A8MU46	457 aa		11.12	□□□□□ -0.63
NPIPA1-208	ENST00000545831	GAS2	O43903	313 aa	Known RBP	11.12	□□□□□ -0.63
NPIPA1-208	ENST00000545831	HIP1R	O75146	1068 aa		11.12	□□□□□ -0.63
NPIPA1-208	ENST00000545831	INHA	P05111	366 aa		11.12	□□□□□ -0.63
NPIPA1-208	ENST00000545831	MYL3	P08590	195 aa		11.12	□□□□□ -0.63
NPIPA1-208	ENST00000545831	ZNF286B	P0CG31	522 aa		11.12	□□□□□ -0.63
NPIPA1-208	ENST00000545831	TBC1D8B	Q0IIM8	1120 aa		11.12	□□□□□ -0.63
NPIPA1-208	ENST00000545831	TARBP2	Q15633	366 aa	Known RBP	11.12	□□□□□ -0.63
NPIPA1-208	ENST00000545831	FSCN1	Q16658	493 aa	Known RBP	11.12	□□□□□ -0.63
NPIPA1-208	ENST00000545831	GNAS	Q5JWF2	1037 aa		11.12	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms