RNA–Protein interactions for RNA: ENST00000545718.2

SCAP-215, Transcript of SREBF chaperone, humanhuman

TSL 5 BASIC

Gene SCAP, Length 2,950 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-215ENST00000545718 GCOM1H8Y6P7 765 aaPredicted RBP17.1■□□□□ 0.33
SCAP-215ENST00000545718 GLI1P08151 1106 aa17.1■□□□□ 0.33
SCAP-215ENST00000545718 POLR2MP0CAP2 368 aa17.1■□□□□ 0.33
SCAP-215ENST00000545718 FOXR1Q6PIV2 292 aa17.1■□□□□ 0.33
SCAP-215ENST00000545718 CDAN1Q8IWY9 1227 aa17.1■□□□□ 0.33
SCAP-215ENST00000545718 RBM46Q8TBY0 533 aaKnown RBP17.1■□□□□ 0.33
SCAP-215ENST00000545718 SEPT11Q9NVA2 429 aaKnown RBP17.1■□□□□ 0.33
SCAP-215ENST00000545718 CWC15Q9P013 229 aaKnown RBP17.1■□□□□ 0.33
SCAP-215ENST00000545718 ZBTB12Q9Y330 459 aaPredicted RBP17.1■□□□□ 0.33
SCAP-215ENST00000545718 GOLGA6CA6NDK9 693 aa17.09■□□□□ 0.33
SCAP-215ENST00000545718 GOLGA6DP0CG33 693 aa17.09■□□□□ 0.33
SCAP-215ENST00000545718 CARSP49589 748 aaKnown RBP17.09■□□□□ 0.33
SCAP-215ENST00000545718 IRF2BP2Q7Z5L9 587 aa17.09■□□□□ 0.33
SCAP-215ENST00000545718 FAM186BQ8IYM0 893 aa17.09■□□□□ 0.33
SCAP-215ENST00000545718 GOLGA6AQ9NYA3 693 aa17.09■□□□□ 0.33
SCAP-215ENST00000545718 AGPSO00116 658 aa17.09■□□□□ 0.33
SCAP-215ENST00000545718 CEP104O60308 925 aa17.09■□□□□ 0.33
SCAP-215ENST00000545718 SLITRK3O94933 977 aa17.09■□□□□ 0.33
SCAP-215ENST00000545718 AARSP49588 968 aaKnown RBP eCLIP17.09■□□□□ 0.33
SCAP-215ENST00000545718 RPS6KA1Q15418 735 aa17.09■□□□□ 0.33
SCAP-215ENST00000545718 MCTP2Q6DN12 878 aa17.09■□□□□ 0.33
SCAP-215ENST00000545718 EPM2AIP1Q7L775 607 aaPredicted RBP17.09■□□□□ 0.33
SCAP-215ENST00000545718 U2AF1L4Q8WU68 220 aaKnown RBP17.09■□□□□ 0.33
SCAP-215ENST00000545718 SLC35C1Q96A29 364 aa17.09■□□□□ 0.33
SCAP-215ENST00000545718 YDJCA8MPS7 323 aa17.08■□□□□ 0.33
SCAP-215ENST00000545718 TTC19Q6DKK2 380 aaPredicted RBP17.08■□□□□ 0.33
SCAP-215ENST00000545718 OTOP1Q7RTM1 612 aa17.08■□□□□ 0.33
SCAP-215ENST00000545718 FAM178BQ8IXR5 827 aa17.08■□□□□ 0.33
SCAP-215ENST00000545718 TSEN2Q8NCE0 465 aaKnown RBP17.08■□□□□ 0.33
SCAP-215ENST00000545718 SH2D3AQ9BRG2 576 aa17.08■□□□□ 0.33
SCAP-215ENST00000545718 MRIQ9BWK5 157 aa17.08■□□□□ 0.33
SCAP-215ENST00000545718 ZBTB21Q9ULJ3 1066 aa17.08■□□□□ 0.33
SCAP-215ENST00000545718 IGLV3-22A0A075B6J6 115 aa17.08■□□□□ 0.32
SCAP-215ENST00000545718 PPP1R12BO60237 982 aaPredicted RBP17.08■□□□□ 0.32
SCAP-215ENST00000545718 ENTPD3O75355 529 aa17.08■□□□□ 0.32
SCAP-215ENST00000545718 TRIM49P0CI25 452 aa17.08■□□□□ 0.32
SCAP-215ENST00000545718 TRIM49CP0CI26 452 aa17.08■□□□□ 0.32
SCAP-215ENST00000545718 CIITAP33076 1130 aa17.08■□□□□ 0.32
SCAP-215ENST00000545718 EPHB4P54760 987 aa17.08■□□□□ 0.32
SCAP-215ENST00000545718 TBC1D10BQ4KMP7 808 aaPredicted RBP17.08■□□□□ 0.32
SCAP-215ENST00000545718 ODR4Q5SWX8 454 aa17.08■□□□□ 0.32
SCAP-215ENST00000545718 ARHGAP27Q6ZUM4 889 aa17.08■□□□□ 0.32
SCAP-215ENST00000545718 SYCP3Q8IZU3 236 aa17.08■□□□□ 0.32
SCAP-215ENST00000545718 BANK1Q8NDB2 785 aa17.08■□□□□ 0.32
SCAP-215ENST00000545718 ZNF577Q9BSK1 485 aa17.08■□□□□ 0.32
SCAP-215ENST00000545718 PARVGQ9HBI0 331 aa17.08■□□□□ 0.32
SCAP-215ENST00000545718 METTL14Q9HCE5 456 aaKnown RBP17.08■□□□□ 0.32
SCAP-215ENST00000545718 RSPH14Q9UHP6 348 aa17.08■□□□□ 0.32
SCAP-215ENST00000545718 NAGPAQ9UK23 515 aa17.08■□□□□ 0.32
SCAP-215ENST00000545718 ZC3H4Q9UPT8 1303 aaKnown RBP17.08■□□□□ 0.32
SCAP-215ENST00000545718 TGFB1I1O43294 461 aa17.07■□□□□ 0.32
SCAP-215ENST00000545718 FAM76AQ8TAV0 307 aa17.07■□□□□ 0.32
SCAP-215ENST00000545718 POLR3CQ9BUI4 534 aaPredicted RBP17.07■□□□□ 0.32
SCAP-215ENST00000545718 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.07■□□□□ 0.328e-7■■■■■ 58.6
SCAP-215ENST00000545718 C10orf71Q711Q0 1435 aa17.07■□□□□ 0.32
SCAP-215ENST00000545718 FLOT1O75955 427 aa17.07■□□□□ 0.32
SCAP-215ENST00000545718 ARP10275 920 aa17.07■□□□□ 0.32
SCAP-215ENST00000545718 EPHA7Q15375 998 aa17.07■□□□□ 0.32
SCAP-215ENST00000545718 TRADDQ15628 312 aa17.07■□□□□ 0.32
SCAP-215ENST00000545718 MEI1Q5TIA1 1274 aa17.07■□□□□ 0.32
SCAP-215ENST00000545718 HS2ST1Q7LGA3 356 aa17.07■□□□□ 0.32
SCAP-215ENST00000545718 VPS36Q86VN1 386 aa17.07■□□□□ 0.32
SCAP-215ENST00000545718 AP1M1Q9BXS5 423 aa17.07■□□□□ 0.32
SCAP-215ENST00000545718 GOPCQ9HD26 462 aa17.07■□□□□ 0.32
SCAP-215ENST00000545718 HSF2BPO75031 334 aa17.07■□□□□ 0.32
SCAP-215ENST00000545718 ABCB4P21439 1286 aa17.07■□□□□ 0.32
SCAP-215ENST00000545718 PPARDQ03181 441 aa17.07■□□□□ 0.32
SCAP-215ENST00000545718 ITIH3Q06033 890 aa17.07■□□□□ 0.32
SCAP-215ENST00000545718 HLTFQ14527 1009 aaKnown RBP eCLIP17.07■□□□□ 0.32
SCAP-215ENST00000545718 DLGAP5Q15398 846 aa17.07■□□□□ 0.32
SCAP-215ENST00000545718 ARHGAP44Q17R89 818 aa17.07■□□□□ 0.32
SCAP-215ENST00000545718 KCTD16Q68DU8 428 aa17.07■□□□□ 0.32
SCAP-215ENST00000545718 IFT20Q8IY31 132 aa17.07■□□□□ 0.32
SCAP-215ENST00000545718 HSD17B14Q9BPX1 270 aa17.07■□□□□ 0.32
SCAP-215ENST00000545718 GLIS2Q9BZE0 524 aaPredicted RBP17.07■□□□□ 0.32
SCAP-215ENST00000545718 SAMM50Q9Y512 469 aa17.07■□□□□ 0.32
SCAP-215ENST00000545718 PCDHGC5Q9Y5F6 944 aa17.07■□□□□ 0.32
SCAP-215ENST00000545718 ANKRD65E5RJM6 399 aa17.06■□□□□ 0.32
SCAP-215ENST00000545718 FAM153BP0C7A2 387 aa17.06■□□□□ 0.32
SCAP-215ENST00000545718 FAM153CQ494X1 144 aa17.06■□□□□ 0.32
SCAP-215ENST00000545718 ZC3H3Q8IXZ2 948 aaKnown RBP17.06■□□□□ 0.32
SCAP-215ENST00000545718 OGFOD1Q8N543 542 aa17.06■□□□□ 0.32
SCAP-215ENST00000545718 FLAD1Q8NFF5 587 aa17.06■□□□□ 0.32
SCAP-215ENST00000545718 CNKSR1Q969H4 720 aa17.06■□□□□ 0.32
SCAP-215ENST00000545718 TMEM39BQ9GZU3 492 aa17.06■□□□□ 0.32
SCAP-215ENST00000545718 PLCB1Q9NQ66 1216 aa17.06■□□□□ 0.32
SCAP-215ENST00000545718 FAM153AQ9UHL3 310 aa17.06■□□□□ 0.32
SCAP-215ENST00000545718 PSMC2P35998 433 aaKnown RBP17.06■□□□□ 0.32
SCAP-215ENST00000545718 CEP55Q53EZ4 464 aa17.06■□□□□ 0.32
SCAP-215ENST00000545718 BTNL9Q6UXG8 535 aa17.06■□□□□ 0.32
SCAP-215ENST00000545718 ZNF572Q7Z3I7 529 aaPredicted RBP17.06■□□□□ 0.32
SCAP-215ENST00000545718 CPXCR1Q8N123 301 aa17.06■□□□□ 0.32
SCAP-215ENST00000545718 HOMER2Q9NSB8 354 aa17.06■□□□□ 0.32
SCAP-215ENST00000545718 WRAP73Q9P2S5 460 aaPredicted RBP17.06■□□□□ 0.32
SCAP-215ENST00000545718 QSER1Q2KHR3 1735 aa17.05■□□□□ 0.32
SCAP-215ENST00000545718 GREB1LQ9C091 1923 aaPredicted RBP17.05■□□□□ 0.32
SCAP-215ENST00000545718 SHTN1A0MZ66 631 aa17.05■□□□□ 0.32
SCAP-215ENST00000545718 SLC26A4O43511 780 aa17.05■□□□□ 0.32
SCAP-215ENST00000545718 PRELPP51888 382 aa17.05■□□□□ 0.32
SCAP-215ENST00000545718 CCDC43Q96MW1 224 aaKnown RBP17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms