RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 MTERF2Q49AM1 385 aa13.47□□□□□ -0.25
COL4A6-209ENST00000545689 RPF1Q9H9Y2 349 aaKnown RBP13.47□□□□□ -0.25
COL4A6-209ENST00000545689 FAM187AA6NFU0 413 aa13.47□□□□□ -0.25
COL4A6-209ENST00000545689 IGBP1P78318 339 aa13.47□□□□□ -0.25
COL4A6-209ENST00000545689 IFRD2Q12894 506 aaPredicted RBP13.47□□□□□ -0.25
COL4A6-209ENST00000545689 ATG16L1Q676U5 607 aa13.47□□□□□ -0.25
COL4A6-209ENST00000545689 NEDD1Q8NHV4 660 aa13.47□□□□□ -0.25
COL4A6-209ENST00000545689 MYCBPQ99417 103 aaPredicted RBP13.47□□□□□ -0.25
COL4A6-209ENST00000545689 AP1M1Q9BXS5 423 aa13.47□□□□□ -0.25
COL4A6-209ENST00000545689 GJB4Q9NTQ9 266 aa13.47□□□□□ -0.25
COL4A6-209ENST00000545689 PRDX5P30044 214 aa13.47□□□□□ -0.25
COL4A6-209ENST00000545689 ITKQ08881 620 aa13.47□□□□□ -0.25
COL4A6-209ENST00000545689 WDR64B1ANS9 1081 aa13.46□□□□□ -0.25
COL4A6-209ENST00000545689 BAG2O95816 211 aa13.46□□□□□ -0.25
COL4A6-209ENST00000545689 S100BP04271 92 aaPredicted RBP13.46□□□□□ -0.25
COL4A6-209ENST00000545689 CALB1P05937 261 aa13.46□□□□□ -0.25
COL4A6-209ENST00000545689 GSTA1P08263 222 aa13.46□□□□□ -0.25
COL4A6-209ENST00000545689 GSTA2P09210 222 aa13.46□□□□□ -0.25
COL4A6-209ENST00000545689 HSP90AA5PQ58FG0 334 aa13.46□□□□□ -0.25
COL4A6-209ENST00000545689 CYP4F22Q6NT55 531 aa13.46□□□□□ -0.25
COL4A6-209ENST00000545689 ENOSF1Q7L5Y1 443 aa13.46□□□□□ -0.25
COL4A6-209ENST00000545689 PDIK1LQ8N165 341 aa13.46□□□□□ -0.25
COL4A6-209ENST00000545689 KLHL29Q96CT2 875 aa13.46□□□□□ -0.25
COL4A6-209ENST00000545689 SLITRK6Q9H5Y7 841 aa13.46□□□□□ -0.25
COL4A6-209ENST00000545689 CACYBPQ9HB71 228 aaKnown RBP13.46□□□□□ -0.25
COL4A6-209ENST00000545689 FBXO40Q9UH90 709 aa13.46□□□□□ -0.25
COL4A6-209ENST00000545689 LRRD1A4D1F6 860 aa13.46□□□□□ -0.25
COL4A6-209ENST00000545689 GOLGA8SH3BPF8 625 aa13.46□□□□□ -0.25
COL4A6-209ENST00000545689 FDX1P10109 184 aa13.46□□□□□ -0.25
COL4A6-209ENST00000545689 TNFAIP2Q03169 654 aa13.46□□□□□ -0.25
COL4A6-209ENST00000545689 KCNH2Q12809 1159 aa13.46□□□□□ -0.25
COL4A6-209ENST00000545689 PPP2R5CQ13362 524 aa13.46□□□□□ -0.25
COL4A6-209ENST00000545689 KIF22Q14807 665 aa13.46□□□□□ -0.25
COL4A6-209ENST00000545689 ANKRD20A4Q4UJ75 823 aa13.46□□□□□ -0.25
COL4A6-209ENST00000545689 ANKRD20A8PQ5CZ79 823 aa13.46□□□□□ -0.25
COL4A6-209ENST00000545689 ANKRD20A2Q5SQ80 823 aa13.46□□□□□ -0.25
COL4A6-209ENST00000545689 ANKRD20A1Q5TYW2 823 aa13.46□□□□□ -0.25
COL4A6-209ENST00000545689 STRIP2Q9ULQ0 834 aa13.46□□□□□ -0.25
COL4A6-209ENST00000545689 POTEMA6NI47 508 aa13.46□□□□□ -0.25
COL4A6-209ENST00000545689 SLC16A3O15427 465 aaKnown RBP13.46□□□□□ -0.25
COL4A6-209ENST00000545689 ECM2O94769 699 aaPredicted RBP13.46□□□□□ -0.25
COL4A6-209ENST00000545689 ACTN1P12814 892 aa13.46□□□□□ -0.25
COL4A6-209ENST00000545689 TXNRD1Q16881 649 aa13.46□□□□□ -0.25
COL4A6-209ENST00000545689 FAM83BQ5T0W9 1011 aa13.46□□□□□ -0.25
COL4A6-209ENST00000545689 FRMD5Q7Z6J6 570 aa13.46□□□□□ -0.25
COL4A6-209ENST00000545689 LRGUKQ96M69 825 aa13.46□□□□□ -0.25
COL4A6-209ENST00000545689 OSBPL9Q96SU4 736 aa13.46□□□□□ -0.25
COL4A6-209ENST00000545689 CCSER1Q9C0I3 900 aa13.46□□□□□ -0.25
COL4A6-209ENST00000545689 FGFR1OP2Q9NVK5 253 aa13.46□□□□□ -0.25
COL4A6-209ENST00000545689 EPS15L1Q9UBC2 864 aa13.46□□□□□ -0.25
COL4A6-209ENST00000545689 ZNF335Q9H4Z2 1342 aaPredicted RBP13.46□□□□□ -0.26
COL4A6-209ENST00000545689 GPC4O75487 556 aa13.46□□□□□ -0.26
COL4A6-209ENST00000545689 HOXA13P31271 388 aaPredicted RBP13.46□□□□□ -0.26
COL4A6-209ENST00000545689 STX1BP61266 288 aa13.46□□□□□ -0.26
COL4A6-209ENST00000545689 SLC7A5Q01650 507 aa13.46□□□□□ -0.26
COL4A6-209ENST00000545689 SBK1Q52WX2 424 aa13.46□□□□□ -0.26
COL4A6-209ENST00000545689 PDXDC2PQ6P474 469 aa13.46□□□□□ -0.26
COL4A6-209ENST00000545689 STOX1Q6ZVD7 989 aa13.46□□□□□ -0.26
COL4A6-209ENST00000545689 NLRP7Q8WX94 980 aa13.46□□□□□ -0.26
COL4A6-209ENST00000545689 HINFPQ9BQA5 517 aa13.46□□□□□ -0.26
COL4A6-209ENST00000545689 K7ERI5 159 aa13.46□□□□□ -0.26
COL4A6-209ENST00000545689 SESTD1Q86VW0 696 aa13.46□□□□□ -0.26
COL4A6-209ENST00000545689 ERICH1Q86X53 443 aa13.46□□□□□ -0.26
COL4A6-209ENST00000545689 PHF20Q9BVI0 1012 aa13.46□□□□□ -0.26
COL4A6-209ENST00000545689 FAM96AQ9H5X1 160 aa13.46□□□□□ -0.26
COL4A6-209ENST00000545689 FAM170AA1A519 330 aa13.45□□□□□ -0.26
COL4A6-209ENST00000545689 ZNF189O75820 626 aaPredicted RBP13.45□□□□□ -0.26
COL4A6-209ENST00000545689 DCTN3O75935 186 aa13.45□□□□□ -0.26
COL4A6-209ENST00000545689 ATP5HO75947 161 aa13.45□□□□□ -0.26
COL4A6-209ENST00000545689 TBXAS1P24557 533 aaPredicted RBP13.45□□□□□ -0.26
COL4A6-209ENST00000545689 BASP1P80723 227 aaKnown RBP13.45□□□□□ -0.26
COL4A6-209ENST00000545689 ARMCX2Q7L311 632 aa13.45□□□□□ -0.26
COL4A6-209ENST00000545689 CNPY4Q8N129 248 aa13.45□□□□□ -0.26
COL4A6-209ENST00000545689 TTC4O95801 387 aa13.45□□□□□ -0.26
COL4A6-209ENST00000545689 CHRNA3P32297 505 aa13.45□□□□□ -0.26
COL4A6-209ENST00000545689 MMEL1Q495T6 779 aa13.45□□□□□ -0.26
COL4A6-209ENST00000545689 FAM47CQ5HY64 1035 aa13.45□□□□□ -0.26
COL4A6-209ENST00000545689 PDXDC1Q6P996 788 aa13.45□□□□□ -0.26
COL4A6-209ENST00000545689 TIPINQ9BVW5 301 aa13.45□□□□□ -0.26
COL4A6-209ENST00000545689 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.45□□□□□ -0.26
COL4A6-209ENST00000545689 MORC2Q9Y6X9 1032 aaPredicted RBP13.45□□□□□ -0.26
COL4A6-209ENST00000545689 A0A1B0GTH6 734 aa13.45□□□□□ -0.26
COL4A6-209ENST00000545689 HSPA8P11142 646 aaKnown RBP13.45□□□□□ -0.26
COL4A6-209ENST00000545689 MTMR1Q13613 665 aa13.45□□□□□ -0.26
COL4A6-209ENST00000545689 RC3H1Q5TC82 1133 aaKnown RBP13.45□□□□□ -0.26
COL4A6-209ENST00000545689 CIAPIN1Q6FI81 312 aa13.45□□□□□ -0.26
COL4A6-209ENST00000545689 PADI6Q6TGC4 694 aa13.45□□□□□ -0.26
COL4A6-209ENST00000545689 CEP95Q96GE4 821 aa13.45□□□□□ -0.26
COL4A6-209ENST00000545689 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.45□□□□□ -0.26
COL4A6-209ENST00000545689 AP5M1Q9H0R1 490 aa13.45□□□□□ -0.26
COL4A6-209ENST00000545689 MAPK13O15264 365 aa13.45□□□□□ -0.26
COL4A6-209ENST00000545689 FOXP2O15409 715 aa13.45□□□□□ -0.26
COL4A6-209ENST00000545689 PLCB4Q15147 1175 aa13.45□□□□□ -0.26
COL4A6-209ENST00000545689 TRIM68Q6AZZ1 485 aa13.45□□□□□ -0.26
COL4A6-209ENST00000545689 OR6B2Q6IFH4 312 aa13.45□□□□□ -0.26
COL4A6-209ENST00000545689 DPP9Q86TI2 863 aa13.45□□□□□ -0.26
COL4A6-209ENST00000545689 SDCCAG3Q96C92 435 aa13.45□□□□□ -0.26
COL4A6-209ENST00000545689 SLC12A6Q9UHW9 1150 aa13.45□□□□□ -0.26
COL4A6-209ENST00000545689 OPHN1O60890 802 aa13.45□□□□□ -0.26
COL4A6-209ENST00000545689 GH2P01242 217 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms