RNA–Protein interactions for RNA: ENST00000545450.6

MSLN-202, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-202ENST00000545450 FBXO28Q9NVF7 368 aa20.61■□□□□ 0.89
MSLN-202ENST00000545450 PVALEFA0A1B0GWK0 134 aa20.6■□□□□ 0.89
MSLN-202ENST00000545450 FSBPO95073 299 aa20.6■□□□□ 0.89
MSLN-202ENST00000545450 CALCRLQ16602 461 aa20.6■□□□□ 0.89
MSLN-202ENST00000545450 APOBEC3FQ8IUX4 373 aaKnown RBP20.6■□□□□ 0.89
MSLN-202ENST00000545450 GUF1Q8N442 669 aaKnown RBP20.6■□□□□ 0.89
MSLN-202ENST00000545450 EPB41L5Q9HCM4 733 aa20.6■□□□□ 0.89
MSLN-202ENST00000545450 GGA3Q9NZ52 723 aa20.6■□□□□ 0.89
MSLN-202ENST00000545450 BUB1O43683 1085 aa20.59■□□□□ 0.89
MSLN-202ENST00000545450 HEXIM1O94992 359 aaKnown RBP20.59■□□□□ 0.89
MSLN-202ENST00000545450 TECP42680 631 aa20.59■□□□□ 0.89
MSLN-202ENST00000545450 PPP4R3AQ6IN85 833 aa20.59■□□□□ 0.89
MSLN-202ENST00000545450 UNC13DQ70J99 1090 aa20.59■□□□□ 0.89
MSLN-202ENST00000545450 YTHDF3Q7Z739 585 aaKnown RBP20.59■□□□□ 0.89
MSLN-202ENST00000545450 CHURC1Q8WUH1 139 aa20.59■□□□□ 0.89
MSLN-202ENST00000545450 ANO3Q9BYT9 981 aa20.59■□□□□ 0.89
MSLN-202ENST00000545450 RANBP17Q9H2T7 1088 aaKnown RBP20.59■□□□□ 0.89
MSLN-202ENST00000545450 FZD1Q9UP38 647 aa20.59■□□□□ 0.89
MSLN-202ENST00000545450 PLA2G6O60733 806 aa20.59■□□□□ 0.89
MSLN-202ENST00000545450 KIAA0754O94854 1291 aa20.59■□□□□ 0.89
MSLN-202ENST00000545450 YBX3P16989 372 aaKnown RBP eCLIP20.59■□□□□ 0.89
MSLN-202ENST00000545450 GUCY2DQ02846 1103 aa20.59■□□□□ 0.89
MSLN-202ENST00000545450 LRRC63Q05C16 580 aa20.59■□□□□ 0.89
MSLN-202ENST00000545450 DGKZQ13574 1117 aa20.59■□□□□ 0.89
MSLN-202ENST00000545450 SV2BQ7L1I2 683 aa20.59■□□□□ 0.89
MSLN-202ENST00000545450 OTUD6BQ8N6M0 293 aa20.59■□□□□ 0.89
MSLN-202ENST00000545450 MYH10P35580 1976 aa20.58■□□□□ 0.89
MSLN-202ENST00000545450 GRID2IPA4D2P6 1211 aa20.58■□□□□ 0.89
MSLN-202ENST00000545450 ZSCAN5CA6NGD5 496 aaPredicted RBP20.58■□□□□ 0.89
MSLN-202ENST00000545450 DDNO94850 711 aaPredicted RBP20.58■□□□□ 0.89
MSLN-202ENST00000545450 TXKP42681 527 aa20.58■□□□□ 0.89
MSLN-202ENST00000545450 NAP1L1P55209 391 aaKnown RBP20.58■□□□□ 0.89
MSLN-202ENST00000545450 CCDC174Q6PII3 467 aa20.58■□□□□ 0.89
MSLN-202ENST00000545450 LRRC55Q6ZSA7 311 aa20.58■□□□□ 0.89
MSLN-202ENST00000545450 CALML4Q96GE6 196 aa20.58■□□□□ 0.89
MSLN-202ENST00000545450 MYCBPQ99417 103 aaPredicted RBP20.58■□□□□ 0.89
MSLN-202ENST00000545450 BLOC1S4Q9NUP1 217 aa20.58■□□□□ 0.89
MSLN-202ENST00000545450 CAPN7Q9Y6W3 813 aa20.58■□□□□ 0.89
MSLN-202ENST00000545450 MYMKA6NI61 221 aa20.58■□□□□ 0.88
MSLN-202ENST00000545450 AP3B2Q13367 1082 aa20.58■□□□□ 0.88
MSLN-202ENST00000545450 NAA35Q5VZE5 725 aa20.58■□□□□ 0.88
MSLN-202ENST00000545450 FOXR2Q6PJQ5 311 aa20.58■□□□□ 0.88
MSLN-202ENST00000545450 CCDC91Q7Z6B0 441 aa20.58■□□□□ 0.88
MSLN-202ENST00000545450 FAM160B2Q86V87 743 aa20.58■□□□□ 0.88
MSLN-202ENST00000545450 IFT81Q8WYA0 676 aa20.58■□□□□ 0.88
MSLN-202ENST00000545450 SYN2Q92777 582 aaPredicted RBP20.58■□□□□ 0.88
MSLN-202ENST00000545450 DDX25Q9UHL0 483 aaKnown RBP20.58■□□□□ 0.88
MSLN-202ENST00000545450 FEM1BQ9UK73 627 aa20.58■□□□□ 0.88
MSLN-202ENST00000545450 PHIPQ8WWQ0 1821 aa20.58■□□□□ 0.88
MSLN-202ENST00000545450 ESYT3A0FGR9 886 aa20.57■□□□□ 0.88
MSLN-202ENST00000545450 SRRM3A6NNA2 597 aaPredicted RBP20.57■□□□□ 0.88
MSLN-202ENST00000545450 PPP1R37O75864 691 aa20.57■□□□□ 0.88
MSLN-202ENST00000545450 NR1D1P20393 614 aa20.57■□□□□ 0.88
MSLN-202ENST00000545450 GSCP56915 257 aaPredicted RBP20.57■□□□□ 0.88
MSLN-202ENST00000545450 GUCY1A3Q02108 690 aa20.57■□□□□ 0.88
MSLN-202ENST00000545450 KCNMA1Q12791 1236 aa20.57■□□□□ 0.88
MSLN-202ENST00000545450 GRB10Q13322 594 aa20.57■□□□□ 0.88
MSLN-202ENST00000545450 NAB2Q15742 525 aa20.57■□□□□ 0.88
MSLN-202ENST00000545450 PTGISQ16647 500 aa20.57■□□□□ 0.88
MSLN-202ENST00000545450 DCAF15Q66K64 600 aa20.57■□□□□ 0.88
MSLN-202ENST00000545450 SAMD1Q6SPF0 538 aaPredicted RBP20.57■□□□□ 0.88
MSLN-202ENST00000545450 MICALCLQ6ZW33 695 aa20.57■□□□□ 0.88
MSLN-202ENST00000545450 CACNA2D4Q7Z3S7 1137 aa20.57■□□□□ 0.88
MSLN-202ENST00000545450 GPIHBP1Q8IV16 184 aa20.57■□□□□ 0.88
MSLN-202ENST00000545450 WHAMMQ8TF30 809 aa20.57■□□□□ 0.88
MSLN-202ENST00000545450 GINM1Q9NU53 330 aa20.57■□□□□ 0.88
MSLN-202ENST00000545450 RNF181Q9P0P0 153 aa20.57■□□□□ 0.88
MSLN-202ENST00000545450 SSC5DA1L4H1 1573 aa20.57■□□□□ 0.88
MSLN-202ENST00000545450 MNAT1P51948 309 aa20.56■□□□□ 0.88
MSLN-202ENST00000545450 CASKIN2Q8WXE0 1202 aa20.56■□□□□ 0.88
MSLN-202ENST00000545450 CRYGNQ8WXF5 182 aa20.56■□□□□ 0.88
MSLN-202ENST00000545450 ATP6V1G3Q96LB4 118 aa20.56■□□□□ 0.88
MSLN-202ENST00000545450 KIAA1683Q9H0B3 1180 aa20.56■□□□□ 0.88
MSLN-202ENST00000545450 NUCKS1Q9H1E3 243 aaKnown RBP20.56■□□□□ 0.88
MSLN-202ENST00000545450 STK17AQ9UEE5 414 aa20.56■□□□□ 0.88
MSLN-202ENST00000545450 ZNF112Q9UJU3 913 aa20.56■□□□□ 0.88
MSLN-202ENST00000545450 GGA2Q9UJY4 613 aa20.56■□□□□ 0.88
MSLN-202ENST00000545450 PARP14Q460N5 1801 aa20.56■□□□□ 0.88
MSLN-202ENST00000545450 PALMO75781 387 aa20.56■□□□□ 0.88
MSLN-202ENST00000545450 HOXA7P31268 230 aaPredicted RBP20.56■□□□□ 0.88
MSLN-202ENST00000545450 HOXA13P31271 388 aaPredicted RBP20.56■□□□□ 0.88
MSLN-202ENST00000545450 FXR2P51116 673 aaKnown RBP eCLIP20.56■□□□□ 0.88
MSLN-202ENST00000545450 SLC9C1Q4G0N8 1177 aa20.56■□□□□ 0.88
MSLN-202ENST00000545450 ZNF473Q8WTR7 871 aaKnown RBP20.56■□□□□ 0.88
MSLN-202ENST00000545450 HAS1Q92839 578 aa20.56■□□□□ 0.88
MSLN-202ENST00000545450 INPP4AQ96PE3 977 aaPredicted RBP20.56■□□□□ 0.88
MSLN-202ENST00000545450 HMGB1P1B2RPK0 211 aaPredicted RBP20.55■□□□□ 0.88
MSLN-202ENST00000545450 TLR2O60603 784 aa20.55■□□□□ 0.88
MSLN-202ENST00000545450 SERPING1P05155 500 aa20.55■□□□□ 0.88
MSLN-202ENST00000545450 GCFC2P16383 781 aaKnown RBP20.55■□□□□ 0.88
MSLN-202ENST00000545450 MDH1P40925 334 aaKnown RBP20.55■□□□□ 0.88
MSLN-202ENST00000545450 TDRD12Q587J7 1177 aaKnown RBP20.55■□□□□ 0.88
MSLN-202ENST00000545450 ZKSCAN4Q969J2 545 aaPredicted RBP20.55■□□□□ 0.88
MSLN-202ENST00000545450 GJA10Q969M2 543 aa20.55■□□□□ 0.88
MSLN-202ENST00000545450 WRNIP1Q96S55 665 aa20.55■□□□□ 0.88
MSLN-202ENST00000545450 CEP72Q9P209 647 aa20.55■□□□□ 0.88
MSLN-202ENST00000545450 PCDHGC5Q9Y5F6 944 aa20.55■□□□□ 0.88
MSLN-202ENST00000545450 MYBP10242 640 aa20.55■□□□□ 0.88
MSLN-202ENST00000545450 USP11P51784 963 aa20.55■□□□□ 0.88
MSLN-202ENST00000545450 GUCY2FP51841 1108 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms