RNA–Protein interactions for RNA: ENST00000545445.1

LTBR-214, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 379 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-214ENST00000545445 DGKDQ16760 1214 aa13.3□□□□□ -0.28
LTBR-214ENST00000545445 CSPP1Q1MSJ5 1256 aa13.3□□□□□ -0.28
LTBR-214ENST00000545445 FAM47CQ5HY64 1035 aa13.3□□□□□ -0.28
LTBR-214ENST00000545445 PHOSPHO2Q8TCD6 241 aa13.3□□□□□ -0.28
LTBR-214ENST00000545445 COPS5Q92905 334 aa13.3□□□□□ -0.28
LTBR-214ENST00000545445 AK8Q96MA6 479 aa13.3□□□□□ -0.28
LTBR-214ENST00000545445 FTOQ9C0B1 505 aaKnown RBP eCLIP13.3□□□□□ -0.28
LTBR-214ENST00000545445 VAV3Q9UKW4 847 aa13.3□□□□□ -0.28
LTBR-214ENST00000545445 PCDHA10Q9Y5I2 948 aa13.3□□□□□ -0.28
LTBR-214ENST00000545445 SRPRBQ9Y5M8 271 aaKnown RBP13.3□□□□□ -0.28
LTBR-214ENST00000545445 ATG7O95352 703 aa13.29□□□□□ -0.28
LTBR-214ENST00000545445 PSAPP07602 524 aa13.29□□□□□ -0.28
LTBR-214ENST00000545445 MYL3P08590 195 aa13.29□□□□□ -0.28
LTBR-214ENST00000545445 SUPT20HL2P0C7V6 817 aa13.29□□□□□ -0.28
LTBR-214ENST00000545445 HOXD8P13378 290 aaPredicted RBP13.29□□□□□ -0.28
LTBR-214ENST00000545445 LONP1P36776 959 aaKnown RBP13.29□□□□□ -0.28
LTBR-214ENST00000545445 TECP42680 631 aa13.29□□□□□ -0.28
LTBR-214ENST00000545445 ACTR2P61160 394 aa13.29□□□□□ -0.28
LTBR-214ENST00000545445 EPHA7Q15375 998 aa13.29□□□□□ -0.28
LTBR-214ENST00000545445 HSDL1Q3SXM5 330 aa13.29□□□□□ -0.28
LTBR-214ENST00000545445 MIS18BP1Q6P0N0 1132 aa13.29□□□□□ -0.28
LTBR-214ENST00000545445 MIER3Q7Z3K6 550 aa13.29□□□□□ -0.28
LTBR-214ENST00000545445 TMCO2Q7Z6W1 182 aaPredicted RBP13.29□□□□□ -0.28
LTBR-214ENST00000545445 IGSF22Q8N9C0 903 aa13.29□□□□□ -0.28
LTBR-214ENST00000545445 KRI1Q8N9T8 703 aaKnown RBP13.29□□□□□ -0.28
LTBR-214ENST00000545445 ERMNQ8TAM6 284 aa13.29□□□□□ -0.28
LTBR-214ENST00000545445 NEK9Q8TD19 979 aa13.29□□□□□ -0.28
LTBR-214ENST00000545445 AFG1LQ8WV93 481 aa13.29□□□□□ -0.28
LTBR-214ENST00000545445 TNPO1Q92973 898 aaKnown RBP13.29□□□□□ -0.28
LTBR-214ENST00000545445 SPATA32Q96LK8 384 aa13.29□□□□□ -0.28
LTBR-214ENST00000545445 GPR20Q99678 358 aa13.29□□□□□ -0.28
LTBR-214ENST00000545445 UNC45AQ9H3U1 944 aa13.29□□□□□ -0.28
LTBR-214ENST00000545445 UBE2ZQ9H832 354 aaPredicted RBP13.29□□□□□ -0.28
LTBR-214ENST00000545445 DISC1Q9NRI5 854 aa13.29□□□□□ -0.28
LTBR-214ENST00000545445 MTUS1Q9ULD2 1270 aa13.29□□□□□ -0.28
LTBR-214ENST00000545445 DDX39AO00148 427 aaKnown RBP13.28□□□□□ -0.28
LTBR-214ENST00000545445 SLC26A4O43511 780 aa13.28□□□□□ -0.28
LTBR-214ENST00000545445 DKC1O60832 514 aaKnown RBP eCLIP13.28□□□□□ -0.28
LTBR-214ENST00000545445 CCNE2O96020 404 aa13.28□□□□□ -0.28
LTBR-214ENST00000545445 SSTR3P32745 418 aaPredicted RBP13.28□□□□□ -0.28
LTBR-214ENST00000545445 RFC2P35250 354 aa13.28□□□□□ -0.28
LTBR-214ENST00000545445 PURAQ00577 322 aaKnown RBP13.28□□□□□ -0.28
LTBR-214ENST00000545445 SPIRE1Q08AE8 756 aa13.28□□□□□ -0.28
LTBR-214ENST00000545445 HAUS3Q68CZ6 603 aa13.28□□□□□ -0.28
LTBR-214ENST00000545445 ABHD15Q6UXT9 468 aa13.28□□□□□ -0.28
LTBR-214ENST00000545445 CLEC17AQ6ZS10 378 aa13.28□□□□□ -0.28
LTBR-214ENST00000545445 GJD3Q8N144 294 aa13.28□□□□□ -0.28
LTBR-214ENST00000545445 ZNF579Q8NAF0 562 aaKnown RBP13.28□□□□□ -0.28
LTBR-214ENST00000545445 LEO1Q8WVC0 666 aaPredicted RBP13.28□□□□□ -0.28
LTBR-214ENST00000545445 GJA10Q969M2 543 aa13.28□□□□□ -0.28
LTBR-214ENST00000545445 BCAS3Q9H6U6 928 aa13.28□□□□□ -0.28
LTBR-214ENST00000545445 LRWD1Q9UFC0 647 aa13.28□□□□□ -0.28
LTBR-214ENST00000545445 SAMM50Q9Y512 469 aa13.28□□□□□ -0.28
LTBR-214ENST00000545445 SCN5AQ14524 2016 aa13.28□□□□□ -0.28
LTBR-214ENST00000545445 IGKV6D-21A0A0A0MT36 114 aa13.27□□□□□ -0.29
LTBR-214ENST00000545445 GSTTP1A0A1W2PQM5 241 aa13.27□□□□□ -0.29
LTBR-214ENST00000545445 VWA3AA6NCI4 1184 aa13.27□□□□□ -0.29
LTBR-214ENST00000545445 RBAK-RBAKDNI3L0D1 243 aa13.27□□□□□ -0.29
LTBR-214ENST00000545445 CHMP2AO43633 222 aa13.27□□□□□ -0.29
LTBR-214ENST00000545445 CUTAO60888 179 aa13.27□□□□□ -0.29
LTBR-214ENST00000545445 P4HBP07237 508 aaKnown RBP13.27□□□□□ -0.29
LTBR-214ENST00000545445 MMP3P08254 477 aa13.27□□□□□ -0.29
LTBR-214ENST00000545445 IQCF3P0C7M6 154 aa13.27□□□□□ -0.29
LTBR-214ENST00000545445 MUTP22033 750 aa13.27□□□□□ -0.29
LTBR-214ENST00000545445 KCNA5P22460 613 aa13.27□□□□□ -0.29
LTBR-214ENST00000545445 MARCKSP29966 332 aaPredicted RBP13.27□□□□□ -0.29
LTBR-214ENST00000545445 TCF7P36402 384 aaPredicted RBP13.27□□□□□ -0.29
LTBR-214ENST00000545445 ME1P48163 572 aa13.27□□□□□ -0.29
LTBR-214ENST00000545445 SLC26A2P50443 739 aa13.27□□□□□ -0.29
LTBR-214ENST00000545445 SP4Q02446 784 aa13.27□□□□□ -0.29
LTBR-214ENST00000545445 FAM160B1Q5W0V3 765 aa13.27□□□□□ -0.29
LTBR-214ENST00000545445 KRT79Q5XKE5 535 aa13.27□□□□□ -0.29
LTBR-214ENST00000545445 NCAPH2Q6IBW4 605 aa13.27□□□□□ -0.29
LTBR-214ENST00000545445 PLPPR4Q7Z2D5 763 aa13.27□□□□□ -0.29
LTBR-214ENST00000545445 FAM178BQ8IXR5 827 aa13.27□□□□□ -0.29
LTBR-214ENST00000545445 KCTD17Q8N5Z5 321 aa13.27□□□□□ -0.29
LTBR-214ENST00000545445 RETREG2Q8NC44 543 aa13.27□□□□□ -0.29
LTBR-214ENST00000545445 GBP4Q96PP9 640 aa13.27□□□□□ -0.29
LTBR-214ENST00000545445 MTG1Q9BT17 334 aaPredicted RBP13.27□□□□□ -0.29
LTBR-214ENST00000545445 SMARCAD1Q9H4L7 1026 aa13.27□□□□□ -0.29
LTBR-214ENST00000545445 AZI2Q9H6S1 392 aa13.27□□□□□ -0.29
LTBR-214ENST00000545445 FBXO2Q9UK22 296 aaPredicted RBP13.27□□□□□ -0.29
LTBR-214ENST00000545445 EMSYQ7Z589 1322 aa13.27□□□□□ -0.29
LTBR-214ENST00000545445 PITPNM1O00562 1244 aa13.26□□□□□ -0.29
LTBR-214ENST00000545445 BACH1O14867 736 aa13.26□□□□□ -0.29
LTBR-214ENST00000545445 SORBS3O60504 671 aa13.26□□□□□ -0.29
LTBR-214ENST00000545445 LGR5O75473 907 aa13.26□□□□□ -0.29
LTBR-214ENST00000545445 IL9P15248 144 aa13.26□□□□□ -0.29
LTBR-214ENST00000545445 KCNJ6P48051 423 aa13.26□□□□□ -0.29
LTBR-214ENST00000545445 WDR5P61964 334 aaKnown RBP13.26□□□□□ -0.29
LTBR-214ENST00000545445 NHLH1Q02575 133 aa13.26□□□□□ -0.29
LTBR-214ENST00000545445 IL17AQ16552 155 aa13.26□□□□□ -0.29
LTBR-214ENST00000545445 NBPF20Q3BBV1 942 aa13.26□□□□□ -0.29
LTBR-214ENST00000545445 AFAP1L1Q8TED9 768 aa13.26□□□□□ -0.29
LTBR-214ENST00000545445 ATP6V0A1Q93050 837 aa13.26□□□□□ -0.29
LTBR-214ENST00000545445 SNX27Q96L92 541 aa13.26□□□□□ -0.29
LTBR-214ENST00000545445 POLR3CQ9BUI4 534 aaPredicted RBP13.26□□□□□ -0.29
LTBR-214ENST00000545445 KATNAL1Q9BW62 490 aa13.26□□□□□ -0.29
LTBR-214ENST00000545445 TUFT1Q9NNX1 390 aa13.26□□□□□ -0.29
LTBR-214ENST00000545445 ZNF215Q9UL58 517 aaPredicted RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms