RNA–Protein interactions for RNA: ENST00000544093.5

CHFR-222, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 942 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-222ENST00000544093 KRT40Q6A162 431 aa26.2■■□□□ 1.78
CHFR-222ENST00000544093 CCDC83Q8IWF9 413 aa26.2■■□□□ 1.78
CHFR-222ENST00000544093 SLC17A8Q8NDX2 589 aa26.2■■□□□ 1.78
CHFR-222ENST00000544093 TNFRSF25Q93038 417 aa26.2■■□□□ 1.78
CHFR-222ENST00000544093 ZBTB10Q96DT7 871 aa26.2■■□□□ 1.78
CHFR-222ENST00000544093 FTHL17Q9BXU8 183 aa26.2■■□□□ 1.78
CHFR-222ENST00000544093 TRANK1O15050 2925 aa26.2■■□□□ 1.78
CHFR-222ENST00000544093 MARCH6O60337 910 aa26.19■■□□□ 1.78
CHFR-222ENST00000544093 C22orf31O95567 290 aa26.19■■□□□ 1.78
CHFR-222ENST00000544093 TMOD1P28289 359 aa26.19■■□□□ 1.78
CHFR-222ENST00000544093 PRKCEQ02156 737 aa26.19■■□□□ 1.78
CHFR-222ENST00000544093 TAP1Q03518 808 aa26.19■■□□□ 1.78
CHFR-222ENST00000544093 NR5A1Q13285 461 aa26.19■■□□□ 1.78
CHFR-222ENST00000544093 PPP2R5CQ13362 524 aa26.19■■□□□ 1.78
CHFR-222ENST00000544093 ODR4Q5SWX8 454 aa26.19■■□□□ 1.78
CHFR-222ENST00000544093 DIS3L2Q8IYB7 885 aaKnown RBP26.19■■□□□ 1.78
CHFR-222ENST00000544093 SLFN12Q8IYM2 578 aa26.19■■□□□ 1.78
CHFR-222ENST00000544093 TOP1MTQ969P6 601 aa26.19■■□□□ 1.78
CHFR-222ENST00000544093 LOXHD1Q8IVV2 1947 aa26.18■■□□□ 1.78
CHFR-222ENST00000544093 DKC1O60832 514 aaKnown RBP eCLIP26.18■■□□□ 1.78
CHFR-222ENST00000544093 DTNBO60941 627 aa26.18■■□□□ 1.78
CHFR-222ENST00000544093 BAG4O95429 457 aaKnown RBP26.18■■□□□ 1.78
CHFR-222ENST00000544093 KIAA0319LQ8IZA0 1049 aa26.18■■□□□ 1.78
CHFR-222ENST00000544093 GJA10Q969M2 543 aa26.18■■□□□ 1.78
CHFR-222ENST00000544093 OSBPL7Q9BZF2 842 aa26.18■■□□□ 1.78
CHFR-222ENST00000544093 EYSQ5T1H1 3165 aa26.17■■□□□ 1.78
CHFR-222ENST00000544093 LOC101059915A0A1B0GWI6 518 aaPredicted RBP26.17■■□□□ 1.78
CHFR-222ENST00000544093 BTBD18B2RXH4 712 aa26.17■■□□□ 1.78
CHFR-222ENST00000544093 ZNF862O60290 1169 aa26.17■■□□□ 1.78
CHFR-222ENST00000544093 HTRA4P83105 476 aaPredicted RBP26.17■■□□□ 1.78
CHFR-222ENST00000544093 TMEM62Q0P6H9 643 aa26.17■■□□□ 1.78
CHFR-222ENST00000544093 XKR3Q5GH77 459 aa26.17■■□□□ 1.78
CHFR-222ENST00000544093 TMCO2Q7Z6W1 182 aaPredicted RBP26.17■■□□□ 1.78
CHFR-222ENST00000544093 METTL13Q8N6R0 699 aa26.17■■□□□ 1.78
CHFR-222ENST00000544093 C8orf76Q96K31 380 aa26.17■■□□□ 1.78
CHFR-222ENST00000544093 PAK2Q13177 524 aa26.16■■□□□ 1.78
CHFR-222ENST00000544093 EARS2Q5JPH6 523 aaKnown RBP26.16■■□□□ 1.78
CHFR-222ENST00000544093 TRMT1LQ7Z2T5 733 aaKnown RBP26.16■■□□□ 1.78
CHFR-222ENST00000544093 MAP7D2Q96T17 732 aa26.16■■□□□ 1.78
CHFR-222ENST00000544093 VAV3Q9UKW4 847 aa26.16■■□□□ 1.78
CHFR-222ENST00000544093 COL4A6Q14031 1691 aa26.15■■□□□ 1.78
CHFR-222ENST00000544093 PSMC5P62195 406 aa26.15■■□□□ 1.78
CHFR-222ENST00000544093 UGCGQ16739 394 aa26.15■■□□□ 1.78
CHFR-222ENST00000544093 FAM117BQ6P1L5 589 aa26.15■■□□□ 1.78
CHFR-222ENST00000544093 FAM184AQ8NB25 1140 aa26.15■■□□□ 1.78
CHFR-222ENST00000544093 NIFKQ9BYG3 293 aaKnown RBP26.15■■□□□ 1.78
CHFR-222ENST00000544093 AGO3Q9H9G7 860 aaKnown RBP26.15■■□□□ 1.78
CHFR-222ENST00000544093 IGFBP4P22692 258 aa26.14■■□□□ 1.78
CHFR-222ENST00000544093 CD52P31358 61 aa26.14■■□□□ 1.78
CHFR-222ENST00000544093 TBC1D8BQ0IIM8 1120 aa26.14■■□□□ 1.78
CHFR-222ENST00000544093 POTEDQ86YR6 584 aa26.14■■□□□ 1.78
CHFR-222ENST00000544093 SP7Q8TDD2 431 aaPredicted RBP26.14■■□□□ 1.78
CHFR-222ENST00000544093 ARNTL2Q8WYA1 636 aa26.14■■□□□ 1.78
CHFR-222ENST00000544093 HAS1Q92839 578 aa26.14■■□□□ 1.78
CHFR-222ENST00000544093 TGS1Q96RS0 853 aaKnown RBP26.14■■□□□ 1.78
CHFR-222ENST00000544093 YME1L1Q96TA2 773 aa26.14■■□□□ 1.78
CHFR-222ENST00000544093 PADI3Q9ULW8 664 aa26.14■■□□□ 1.78
CHFR-222ENST00000544093 LCHNA4D1U4 455 aa26.13■■□□□ 1.77
CHFR-222ENST00000544093 LINC01553A4QN01 128 aa26.13■■□□□ 1.77
CHFR-222ENST00000544093 GTPBP6O43824 516 aaPredicted RBP26.13■■□□□ 1.77
CHFR-222ENST00000544093 POU3F3P20264 500 aaPredicted RBP26.13■■□□□ 1.77
CHFR-222ENST00000544093 QARSP47897 775 aaKnown RBP26.13■■□□□ 1.77
CHFR-222ENST00000544093 CRYBB1P53674 252 aaPredicted RBP26.13■■□□□ 1.77
CHFR-222ENST00000544093 CDC42EP1Q00587 391 aa26.13■■□□□ 1.77
CHFR-222ENST00000544093 EFCAB12Q6NXP0 572 aa26.13■■□□□ 1.77
CHFR-222ENST00000544093 FOXP1Q9H334 677 aaPredicted RBP26.13■■□□□ 1.77
CHFR-222ENST00000544093 RNF216Q9NWF9 866 aaPredicted RBP26.13■■□□□ 1.77
CHFR-222ENST00000544093 SEPT9Q9UHD8 586 aaPredicted RBP26.13■■□□□ 1.77
CHFR-222ENST00000544093 GINS2Q9Y248 185 aa26.13■■□□□ 1.77
CHFR-222ENST00000544093 KIF3AQ9Y496 699 aa26.13■■□□□ 1.77
CHFR-222ENST00000544093 TTC3P53804 2025 aa26.13■■□□□ 1.77
CHFR-222ENST00000544093 FAM205CA6NFA0 338 aa26.12■■□□□ 1.77
CHFR-222ENST00000544093 ENPP3O14638 875 aa26.12■■□□□ 1.77
CHFR-222ENST00000544093 GPR182O15218 404 aa26.12■■□□□ 1.77
CHFR-222ENST00000544093 P4HBP07237 508 aaKnown RBP26.12■■□□□ 1.77
CHFR-222ENST00000544093 MCM2P49736 904 aa26.12■■□□□ 1.77
CHFR-222ENST00000544093 FOSBP53539 338 aa26.12■■□□□ 1.77
CHFR-222ENST00000544093 ERVK-21P61565 698 aa26.12■■□□□ 1.77
CHFR-222ENST00000544093 ADGRE1Q14246 886 aa26.12■■□□□ 1.77
CHFR-222ENST00000544093 TARBP2Q15633 366 aaKnown RBP26.12■■□□□ 1.77
CHFR-222ENST00000544093 LINC01465Q8N7H1 131 aa26.12■■□□□ 1.77
CHFR-222ENST00000544093 FBXO18Q8NFZ0 1043 aa26.12■■□□□ 1.77
CHFR-222ENST00000544093 SAMD11Q96NU1 681 aa26.12■■□□□ 1.77
CHFR-222ENST00000544093 JPH2Q9BR39 696 aaPredicted RBP26.12■■□□□ 1.77
CHFR-222ENST00000544093 PPME1Q9Y570 386 aa26.12■■□□□ 1.77
CHFR-222ENST00000544093 PRUNE2Q8WUY3 3088 aa26.12■■□□□ 1.77
CHFR-222ENST00000544093 UNC80Q8N2C7 3258 aa26.11■■□□□ 1.77
CHFR-222ENST00000544093 NEMFO60524 1076 aa26.11■■□□□ 1.77
CHFR-222ENST00000544093 RPS6KA5O75582 802 aa26.11■■□□□ 1.77
CHFR-222ENST00000544093 UPP2O95045 317 aa26.11■■□□□ 1.77
CHFR-222ENST00000544093 EPHA7Q15375 998 aa26.11■■□□□ 1.77
CHFR-222ENST00000544093 CALCRLQ16602 461 aa26.11■■□□□ 1.77
CHFR-222ENST00000544093 PHF6Q8IWS0 365 aaKnown RBP eCLIP26.11■■□□□ 1.77
CHFR-222ENST00000544093 EXOC8Q8IYI6 725 aa26.11■■□□□ 1.77
CHFR-222ENST00000544093 BANK1Q8NDB2 785 aa26.11■■□□□ 1.77
CHFR-222ENST00000544093 TSPYL2Q9H2G4 693 aaPredicted RBP26.11■■□□□ 1.77
CHFR-222ENST00000544093 CERS4Q9HA82 394 aa26.11■■□□□ 1.77
CHFR-222ENST00000544093 AKT3Q9Y243 479 aa26.11■■□□□ 1.77
CHFR-222ENST00000544093 A0A0C4DFX4 3053 aa26.1■■□□□ 1.77
CHFR-222ENST00000544093 EML1O00423 815 aa26.1■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms