RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 CUL7Q14999 1698 aa16.55■□□□□ 0.24
CHD4-210ENST00000544040 ZNF233A6NK53 670 aa16.54■□□□□ 0.24
CHD4-210ENST00000544040 CHGBP05060 677 aa16.54■□□□□ 0.24
CHD4-210ENST00000544040 CCND2P30279 289 aa16.54■□□□□ 0.24
CHD4-210ENST00000544040 KCTD2Q14681 263 aa16.54■□□□□ 0.24
CHD4-210ENST00000544040 DCAF15Q66K64 600 aa16.54■□□□□ 0.24
CHD4-210ENST00000544040 USP17L2Q6R6M4 530 aa16.54■□□□□ 0.24
CHD4-210ENST00000544040 PARVGQ9HBI0 331 aa16.54■□□□□ 0.24
CHD4-210ENST00000544040 STX18Q9P2W9 335 aaKnown RBP16.54■□□□□ 0.24
CHD4-210ENST00000544040 DIAPH2O60879 1101 aa16.54■□□□□ 0.24
CHD4-210ENST00000544040 LARGE1O95461 756 aa16.54■□□□□ 0.24
CHD4-210ENST00000544040 MYO1EQ12965 1108 aa16.54■□□□□ 0.24
CHD4-210ENST00000544040 TERF2Q15554 542 aa16.54■□□□□ 0.24
CHD4-210ENST00000544040 MOSPD1Q9UJG1 213 aa16.54■□□□□ 0.24
CHD4-210ENST00000544040 MFAP3LO75121 409 aa16.54■□□□□ 0.24
CHD4-210ENST00000544040 ALKBH5Q6P6C2 394 aaKnown RBP16.54■□□□□ 0.24
CHD4-210ENST00000544040 DHX38Q92620 1227 aaKnown RBP16.54■□□□□ 0.24
CHD4-210ENST00000544040 NGRNQ9NPE2 291 aaKnown RBP16.54■□□□□ 0.24
CHD4-210ENST00000544040 SYCP2Q9BX26 1530 aa16.54■□□□□ 0.24
CHD4-210ENST00000544040 CTIFO43310 598 aaKnown RBP16.54■□□□□ 0.24
CHD4-210ENST00000544040 UBE3AQ05086 875 aa16.54■□□□□ 0.24
CHD4-210ENST00000544040 GFPT1Q06210 699 aaPredicted RBP16.54■□□□□ 0.24
CHD4-210ENST00000544040 FSCBQ5H9T9 825 aa16.54■□□□□ 0.24
CHD4-210ENST00000544040 ZMYM1Q5SVZ6 1142 aa16.54■□□□□ 0.24
CHD4-210ENST00000544040 GANCQ8TET4 914 aa16.54■□□□□ 0.24
CHD4-210ENST00000544040 CDCA7Q9BWT1 371 aaPredicted RBP16.54■□□□□ 0.24
CHD4-210ENST00000544040 ADAM21Q9UKJ8 722 aa16.54■□□□□ 0.24
CHD4-210ENST00000544040 IPO5O00410 1097 aaKnown RBP16.54■□□□□ 0.24
CHD4-210ENST00000544040 SEC24DO94855 1032 aaPredicted RBP16.54■□□□□ 0.24
CHD4-210ENST00000544040 TJP3O95049 919 aa16.54■□□□□ 0.24
CHD4-210ENST00000544040 PYGLP06737 847 aa16.54■□□□□ 0.24
CHD4-210ENST00000544040 KCNA4P22459 653 aa16.54■□□□□ 0.24
CHD4-210ENST00000544040 HOXA13P31271 388 aaPredicted RBP16.54■□□□□ 0.24
CHD4-210ENST00000544040 NAF1Q96HR8 494 aaKnown RBP16.54■□□□□ 0.24
CHD4-210ENST00000544040 DBNLQ9UJU6 430 aaKnown RBP16.54■□□□□ 0.24
CHD4-210ENST00000544040 HEY1Q9Y5J3 304 aa16.54■□□□□ 0.24
CHD4-210ENST00000544040 EDC4Q6P2E9 1401 aaKnown RBP16.54■□□□□ 0.24
CHD4-210ENST00000544040 NCK2O43639 380 aa16.53■□□□□ 0.24
CHD4-210ENST00000544040 KRT37O76014 449 aa16.53■□□□□ 0.24
CHD4-210ENST00000544040 APBA3O96018 575 aa16.53■□□□□ 0.24
CHD4-210ENST00000544040 CCNE1P24864 410 aa16.53■□□□□ 0.24
CHD4-210ENST00000544040 KLC2Q9H0B6 622 aa16.53■□□□□ 0.24
CHD4-210ENST00000544040 SARS2Q9NP81 518 aaKnown RBP16.53■□□□□ 0.24
CHD4-210ENST00000544040 TMEM247A6NEH6 219 aa16.53■□□□□ 0.24
CHD4-210ENST00000544040 SUPT3HO75486 399 aa16.53■□□□□ 0.24
CHD4-210ENST00000544040 ANXA13P27216 316 aa16.53■□□□□ 0.24
CHD4-210ENST00000544040 MECOMQ03112 1051 aa16.53■□□□□ 0.24
CHD4-210ENST00000544040 IMPG1Q17R60 797 aa16.53■□□□□ 0.24
CHD4-210ENST00000544040 ANAPC7Q9UJX3 599 aa16.53■□□□□ 0.24
CHD4-210ENST00000544040 KIAA1841Q6NSI8 718 aa16.53■□□□□ 0.24
CHD4-210ENST00000544040 TAGAPQ8N103 731 aa16.53■□□□□ 0.24
CHD4-210ENST00000544040 CCNYL1Q8N7R7 359 aa16.53■□□□□ 0.24
CHD4-210ENST00000544040 AGR3Q8TD06 166 aa16.53■□□□□ 0.24
CHD4-210ENST00000544040 PDCD6IPQ8WUM4 868 aaKnown RBP16.53■□□□□ 0.24
CHD4-210ENST00000544040 EPC1Q9H2F5 836 aa16.53■□□□□ 0.24
CHD4-210ENST00000544040 ZNF804BA4D1E1 1349 aa16.53■□□□□ 0.24
CHD4-210ENST00000544040 NEK2P51955 445 aa16.53■□□□□ 0.24
CHD4-210ENST00000544040 A2MP01023 1474 aa16.53■□□□□ 0.24
CHD4-210ENST00000544040 HAUS5O94927 633 aa16.53■□□□□ 0.24
CHD4-210ENST00000544040 ARL4CP56559 192 aa16.53■□□□□ 0.24
CHD4-210ENST00000544040 COPS2P61201 443 aa16.53■□□□□ 0.24
CHD4-210ENST00000544040 POU5F1BQ06416 359 aa16.53■□□□□ 0.24
CHD4-210ENST00000544040 UBE3CQ15386 1083 aa16.53■□□□□ 0.24
CHD4-210ENST00000544040 EMBQ6PCB8 327 aa16.53■□□□□ 0.24
CHD4-210ENST00000544040 BTBD6Q96KE9 485 aa16.53■□□□□ 0.24
CHD4-210ENST00000544040 PPP1R36Q96LQ0 422 aa16.53■□□□□ 0.24
CHD4-210ENST00000544040 MSTO1Q9BUK6 570 aa16.53■□□□□ 0.24
CHD4-210ENST00000544040 DDX28Q9NUL7 540 aaKnown RBP16.53■□□□□ 0.24
CHD4-210ENST00000544040 ZSCAN20P17040 1043 aaPredicted RBP16.53■□□□□ 0.24
CHD4-210ENST00000544040 ZNF211Q13398 564 aaPredicted RBP16.53■□□□□ 0.24
CHD4-210ENST00000544040 ARL8AQ96BM9 186 aa16.53■□□□□ 0.24
CHD4-210ENST00000544040 DCPSQ96C86 337 aaKnown RBP16.53■□□□□ 0.24
CHD4-210ENST00000544040 DYNLL2Q96FJ2 89 aa16.53■□□□□ 0.24
CHD4-210ENST00000544040 CYP2D7A0A087X1C5 515 aa16.52■□□□□ 0.24
CHD4-210ENST00000544040 ZSCAN9O15535 394 aaPredicted RBP16.52■□□□□ 0.24
CHD4-210ENST00000544040 RAD23BP54727 409 aa16.52■□□□□ 0.24
CHD4-210ENST00000544040 TGS1Q96RS0 853 aaKnown RBP16.52■□□□□ 0.24
CHD4-210ENST00000544040 KLHL8Q9P2G9 620 aaPredicted RBP16.52■□□□□ 0.24
CHD4-210ENST00000544040 ESYT3A0FGR9 886 aa16.52■□□□□ 0.24
CHD4-210ENST00000544040 PAMP19021 973 aa16.52■□□□□ 0.24
CHD4-210ENST00000544040 AP2B1P63010 937 aa16.52■□□□□ 0.24
CHD4-210ENST00000544040 LBRQ14739 615 aaKnown RBP16.52■□□□□ 0.24
CHD4-210ENST00000544040 LCORLQ8N3X6 602 aa16.52■□□□□ 0.24
CHD4-210ENST00000544040 OR6B3Q8NGW1 331 aa16.52■□□□□ 0.24
CHD4-210ENST00000544040 TTC25Q96NG3 672 aa16.52■□□□□ 0.24
CHD4-210ENST00000544040 TRIM49BA6NDI0 452 aa16.52■□□□□ 0.24
CHD4-210ENST00000544040 MDH1BQ5I0G3 518 aa16.52■□□□□ 0.24
CHD4-210ENST00000544040 ICE2Q659A1 982 aa16.52■□□□□ 0.24
CHD4-210ENST00000544040 PRPF38AQ8NAV1 312 aaKnown RBP16.52■□□□□ 0.24
CHD4-210ENST00000544040 MMTAG2Q9BU76 263 aaKnown RBP16.52■□□□□ 0.24
CHD4-210ENST00000544040 SLC13A1Q9BZW2 595 aa16.52■□□□□ 0.24
CHD4-210ENST00000544040 RPF1Q9H9Y2 349 aaKnown RBP16.52■□□□□ 0.24
CHD4-210ENST00000544040 CASP1P29466 404 aa16.52■□□□□ 0.23
CHD4-210ENST00000544040 PMS2P54278 862 aa16.52■□□□□ 0.23
CHD4-210ENST00000544040 SEPT2Q15019 361 aa16.52■□□□□ 0.23
CHD4-210ENST00000544040 ARL13BQ3SXY8 428 aa16.52■□□□□ 0.23
CHD4-210ENST00000544040 RASSF3Q86WH2 238 aa16.52■□□□□ 0.23
CHD4-210ENST00000544040 LZICQ8WZA0 190 aa16.52■□□□□ 0.23
CHD4-210ENST00000544040 GGT7Q9UJ14 662 aa16.52■□□□□ 0.23
CHD4-210ENST00000544040 MORF4L2Q15014 288 aa16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms