RNA–Protein interactions for RNA: ENST00000543354.5

RPS6KC1-206, Transcript of ribosomal protein S6 kinase C1, humanhuman

TSL 1 (best) BASIC

Gene RPS6KC1, Length 4,082 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS6KC1-206ENST00000543354 CD58P19256 250 aa14.9□□□□□ -0.02
RPS6KC1-206ENST00000543354 PDIA6Q15084 440 aa14.9□□□□□ -0.02
RPS6KC1-206ENST00000543354 SMAD1Q15797 465 aaKnown RBP14.9□□□□□ -0.02
RPS6KC1-206ENST00000543354 KCTD19Q17RG1 926 aaPredicted RBP14.9□□□□□ -0.02
RPS6KC1-206ENST00000543354 ILDR1Q86SU0 546 aaPredicted RBP14.9□□□□□ -0.02
RPS6KC1-206ENST00000543354 ATP2A3Q93084 1043 aa14.9□□□□□ -0.02
RPS6KC1-206ENST00000543354 TTC17Q96AE7 1141 aa14.9□□□□□ -0.02
RPS6KC1-206ENST00000543354 PHF20Q9BVI0 1012 aa14.9□□□□□ -0.02
RPS6KC1-206ENST00000543354 ALG13Q9NP73 1137 aaKnown RBP14.9□□□□□ -0.02
RPS6KC1-206ENST00000543354 SAYSD1Q9NPB0 183 aa14.9□□□□□ -0.02
RPS6KC1-206ENST00000543354 HPSEQ9Y251 543 aa14.9□□□□□ -0.02
RPS6KC1-206ENST00000543354 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.9□□□□□ -0.02
RPS6KC1-206ENST00000543354 SYNJ2BP-COX16A0A087WUM0 186 aa14.9□□□□□ -0.02
RPS6KC1-206ENST00000543354 PSMD14O00487 310 aa14.9□□□□□ -0.02
RPS6KC1-206ENST00000543354 NOL3O60936 208 aaKnown RBP14.9□□□□□ -0.02
RPS6KC1-206ENST00000543354 GCFC2P16383 781 aaKnown RBP14.9□□□□□ -0.02
RPS6KC1-206ENST00000543354 HDAC7Q8WUI4 952 aa14.9□□□□□ -0.02
RPS6KC1-206ENST00000543354 ANO3Q9BYT9 981 aa14.9□□□□□ -0.02
RPS6KC1-206ENST00000543354 COX16Q9P0S2 106 aa14.9□□□□□ -0.02
RPS6KC1-206ENST00000543354 SPAG7O75391 227 aa14.89□□□□□ -0.03
RPS6KC1-206ENST00000543354 FTLP02792 175 aaPredicted RBP14.89□□□□□ -0.03
RPS6KC1-206ENST00000543354 RWDD2BP57060 319 aa14.89□□□□□ -0.03
RPS6KC1-206ENST00000543354 PASD1Q8IV76 773 aa14.89□□□□□ -0.03
RPS6KC1-206ENST00000543354 CHURC1Q8WUH1 139 aa14.89□□□□□ -0.03
RPS6KC1-206ENST00000543354 IWS1Q96ST2 819 aa14.89□□□□□ -0.03
RPS6KC1-206ENST00000543354 TEKT3Q9BXF9 490 aa14.89□□□□□ -0.03
RPS6KC1-206ENST00000543354 SCOCQ9UIL1 159 aa14.89□□□□□ -0.03
RPS6KC1-206ENST00000543354 MINPP1Q9UNW1 487 aa14.89□□□□□ -0.03
RPS6KC1-206ENST00000543354 PVALEFA0A1B0GWK0 134 aa14.89□□□□□ -0.03
RPS6KC1-206ENST00000543354 TRPA1O75762 1119 aa14.89□□□□□ -0.03
RPS6KC1-206ENST00000543354 NBPF9Q3BBW0 867 aa14.89□□□□□ -0.03
RPS6KC1-206ENST00000543354 RSRC2Q7L4I2 434 aaKnown RBP14.89□□□□□ -0.03
RPS6KC1-206ENST00000543354 GLG1Q92896 1179 aa14.89□□□□□ -0.03
RPS6KC1-206ENST00000543354 RNF25Q96BH1 459 aaPredicted RBP14.89□□□□□ -0.03
RPS6KC1-206ENST00000543354 TXLNGQ9NUQ3 528 aa14.89□□□□□ -0.03
RPS6KC1-206ENST00000543354 NRKQ7Z2Y5 1582 aa14.89□□□□□ -0.03
RPS6KC1-206ENST00000543354 CPS1P31327 1500 aa14.89□□□□□ -0.03
RPS6KC1-206ENST00000543354 CLRN2A0PK11 232 aa14.89□□□□□ -0.03
RPS6KC1-206ENST00000543354 TCP11X1B4DZS4 312 aa14.89□□□□□ -0.03
RPS6KC1-206ENST00000543354 RNF8O76064 485 aa14.89□□□□□ -0.03
RPS6KC1-206ENST00000543354 MT-ND3P03897 115 aa14.89□□□□□ -0.03
RPS6KC1-206ENST00000543354 SLC9A1P19634 815 aa14.89□□□□□ -0.03
RPS6KC1-206ENST00000543354 KCNJ1P48048 391 aa14.89□□□□□ -0.03
RPS6KC1-206ENST00000543354 PDE1BQ01064 536 aa14.89□□□□□ -0.03
RPS6KC1-206ENST00000543354 ABCB5Q2M3G0 1257 aa14.89□□□□□ -0.03
RPS6KC1-206ENST00000543354 SH2D4BQ5SQS7 431 aa14.89□□□□□ -0.03
RPS6KC1-206ENST00000543354 RPUSD2Q8IZ73 545 aaKnown RBP14.89□□□□□ -0.03
RPS6KC1-206ENST00000543354 LRRC43Q8N309 656 aa14.89□□□□□ -0.03
RPS6KC1-206ENST00000543354 RAD54LQ92698 747 aa14.89□□□□□ -0.03
RPS6KC1-206ENST00000543354 CYFIP2Q96F07 1278 aa14.89□□□□□ -0.03
RPS6KC1-206ENST00000543354 TSC22D3Q99576 134 aa14.89□□□□□ -0.03
RPS6KC1-206ENST00000543354 PRMT1Q99873 361 aaKnown RBP14.89□□□□□ -0.03
RPS6KC1-206ENST00000543354 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.89□□□□□ -0.03
RPS6KC1-206ENST00000543354 ARAP3Q8WWN8 1544 aa14.88□□□□□ -0.03
RPS6KC1-206ENST00000543354 PFDN1O60925 122 aa14.88□□□□□ -0.03
RPS6KC1-206ENST00000543354 SEPT6Q14141 434 aa14.88□□□□□ -0.03
RPS6KC1-206ENST00000543354 FBXO41Q8TF61 875 aa14.88□□□□□ -0.03
RPS6KC1-206ENST00000543354 GINM1Q9NU53 330 aa14.88□□□□□ -0.03
RPS6KC1-206ENST00000543354 BARHL2Q9NY43 387 aa14.88□□□□□ -0.03
RPS6KC1-206ENST00000543354 RFX7Q2KHR2 1363 aa14.88□□□□□ -0.03
RPS6KC1-206ENST00000543354 MYMKA6NI61 221 aa14.88□□□□□ -0.03
RPS6KC1-206ENST00000543354 USP17L10C9JJH3 530 aa14.88□□□□□ -0.03
RPS6KC1-206ENST00000543354 SSTR3P32745 418 aaPredicted RBP14.88□□□□□ -0.03
RPS6KC1-206ENST00000543354 CCDC137Q6PK04 289 aaKnown RBP14.88□□□□□ -0.03
RPS6KC1-206ENST00000543354 RNF34Q969K3 372 aa14.88□□□□□ -0.03
RPS6KC1-206ENST00000543354 SMYD2Q9NRG4 433 aa14.88□□□□□ -0.03
RPS6KC1-206ENST00000543354 CNOT8Q9UFF9 292 aaKnown RBP14.88□□□□□ -0.03
RPS6KC1-206ENST00000543354 PPP1R9AQ9ULJ8 1098 aa14.88□□□□□ -0.03
RPS6KC1-206ENST00000543354 FOSP01100 380 aaPredicted RBP14.88□□□□□ -0.03
RPS6KC1-206ENST00000543354 SKIP12755 728 aa14.88□□□□□ -0.03
RPS6KC1-206ENST00000543354 MAP7Q14244 749 aa14.88□□□□□ -0.03
RPS6KC1-206ENST00000543354 KRT81Q14533 505 aa14.88□□□□□ -0.03
RPS6KC1-206ENST00000543354 GBP7Q8N8V2 638 aaPredicted RBP14.88□□□□□ -0.03
RPS6KC1-206ENST00000543354 PPP4R1Q8TF05 950 aa14.88□□□□□ -0.03
RPS6KC1-206ENST00000543354 XDHP47989 1333 aa14.88□□□□□ -0.03
RPS6KC1-206ENST00000543354 NOP56O00567 594 aaKnown RBP14.87□□□□□ -0.03
RPS6KC1-206ENST00000543354 CHN1P15882 459 aa14.87□□□□□ -0.03
RPS6KC1-206ENST00000543354 ELF1P32519 619 aa14.87□□□□□ -0.03
RPS6KC1-206ENST00000543354 PIK3CAP42336 1068 aa14.87□□□□□ -0.03
RPS6KC1-206ENST00000543354 DMP1Q13316 513 aaPredicted RBP14.87□□□□□ -0.03
RPS6KC1-206ENST00000543354 SLC18A3Q16572 532 aa14.87□□□□□ -0.03
RPS6KC1-206ENST00000543354 DYDC2Q96IM9 177 aa14.87□□□□□ -0.03
RPS6KC1-206ENST00000543354 TGS1Q96RS0 853 aaKnown RBP14.87□□□□□ -0.03
RPS6KC1-206ENST00000543354 ECT2Q9H8V3 914 aa14.87□□□□□ -0.03
RPS6KC1-206ENST00000543354 DBNDD1Q9H9R9 158 aa14.87□□□□□ -0.03
RPS6KC1-206ENST00000543354 STK24Q9Y6E0 443 aa14.87□□□□□ -0.03
RPS6KC1-206ENST00000543354 REREQ9P2R6 1566 aa14.87□□□□□ -0.03
RPS6KC1-206ENST00000543354 MAPK13O15264 365 aa14.87□□□□□ -0.03
RPS6KC1-206ENST00000543354 KRT1P04264 644 aa14.87□□□□□ -0.03
RPS6KC1-206ENST00000543354 PLS3P13797 630 aa14.87□□□□□ -0.03
RPS6KC1-206ENST00000543354 HSPA6P17066 643 aa14.87□□□□□ -0.03
RPS6KC1-206ENST00000543354 CDC37Q16543 378 aaPredicted RBP14.87□□□□□ -0.03
RPS6KC1-206ENST00000543354 HADHQ16836 314 aaKnown RBP14.87□□□□□ -0.03
RPS6KC1-206ENST00000543354 TRIM59Q8IWR1 403 aa14.87□□□□□ -0.03
RPS6KC1-206ENST00000543354 SEC16BQ96JE7 1060 aa14.87□□□□□ -0.03
RPS6KC1-206ENST00000543354 SPZ1Q9BXG8 430 aa14.87□□□□□ -0.03
RPS6KC1-206ENST00000543354 IFT122Q9HBG6 1241 aa14.87□□□□□ -0.03
RPS6KC1-206ENST00000543354 NXF1Q9UBU9 619 aaKnown RBP14.87□□□□□ -0.03
RPS6KC1-206ENST00000543354 SUFUQ9UMX1 484 aa14.87□□□□□ -0.03
RPS6KC1-206ENST00000543354 CASQ2O14958 399 aaPredicted RBP14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms