RNA–Protein interactions for RNA: ENST00000543115.5

PTPN6-220, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 4

Gene PTPN6, Length 650 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-220ENST00000543115 CCDC148Q8NFR7 591 aa13.67□□□□□ -0.22
PTPN6-220ENST00000543115 BICD2Q8TD16 824 aa13.67□□□□□ -0.22
PTPN6-220ENST00000543115 GJA10Q969M2 543 aa13.67□□□□□ -0.22
PTPN6-220ENST00000543115 UPF3BQ9BZI7 483 aaKnown RBP13.67□□□□□ -0.22
PTPN6-220ENST00000543115 NSUN3Q9H649 340 aaKnown RBP13.67□□□□□ -0.22
PTPN6-220ENST00000543115 ERVK-5Q9HDB9 667 aa13.67□□□□□ -0.22
PTPN6-220ENST00000543115 GABBR1Q9UBS5 961 aa13.67□□□□□ -0.22
PTPN6-220ENST00000543115 RAPGEFL1Q9UHV5 662 aa13.67□□□□□ -0.22
PTPN6-220ENST00000543115 NOC2LQ9Y3T9 749 aaKnown RBP13.67□□□□□ -0.22
PTPN6-220ENST00000543115 MRPL42Q9Y6G3 142 aaKnown RBP13.67□□□□□ -0.22
PTPN6-220ENST00000543115 KAT6AQ92794 2004 aa13.66□□□□□ -0.22
PTPN6-220ENST00000543115 NLRC5Q86WI3 1866 aa13.66□□□□□ -0.22
PTPN6-220ENST00000543115 H3BQ06 376 aaPredicted RBP13.66□□□□□ -0.22
PTPN6-220ENST00000543115 MSH4O15457 936 aa13.66□□□□□ -0.22
PTPN6-220ENST00000543115 EPB41L2O43491 1005 aaKnown RBP13.66□□□□□ -0.22
PTPN6-220ENST00000543115 ZNF862O60290 1169 aa13.66□□□□□ -0.22
PTPN6-220ENST00000543115 CSPG5O95196 566 aa13.66□□□□□ -0.22
PTPN6-220ENST00000543115 PSAPP07602 524 aa13.66□□□□□ -0.22
PTPN6-220ENST00000543115 IL9P15248 144 aa13.66□□□□□ -0.22
PTPN6-220ENST00000543115 COL9A1P20849 921 aa13.66□□□□□ -0.22
PTPN6-220ENST00000543115 NLRP5P59047 1200 aa13.66□□□□□ -0.22
PTPN6-220ENST00000543115 COL19A1Q14993 1142 aa13.66□□□□□ -0.22
PTPN6-220ENST00000543115 PAN2Q504Q3 1202 aaKnown RBP13.66□□□□□ -0.22
PTPN6-220ENST00000543115 SMAP1Q8IYB5 467 aaPredicted RBP13.66□□□□□ -0.22
PTPN6-220ENST00000543115 NEK9Q8TD19 979 aa13.66□□□□□ -0.22
PTPN6-220ENST00000543115 BBXQ8WY36 941 aaPredicted RBP13.66□□□□□ -0.22
PTPN6-220ENST00000543115 C11orf84Q9BUA3 381 aaPredicted RBP13.66□□□□□ -0.22
PTPN6-220ENST00000543115 EPHX3Q9H6B9 360 aa13.66□□□□□ -0.22
PTPN6-220ENST00000543115 SH3GLB2Q9NR46 395 aa13.66□□□□□ -0.22
PTPN6-220ENST00000543115 RWDD3Q9Y3V2 267 aa13.66□□□□□ -0.22
PTPN6-220ENST00000543115 PCDHA10Q9Y5I2 948 aa13.66□□□□□ -0.22
PTPN6-220ENST00000543115 RALGAPA2Q2PPJ7 1873 aa13.65□□□□□ -0.22
PTPN6-220ENST00000543115 GPR32O75388 356 aa13.65□□□□□ -0.22
PTPN6-220ENST00000543115 RPS6KA5O75582 802 aa13.65□□□□□ -0.22
PTPN6-220ENST00000543115 VTNP04004 478 aa13.65□□□□□ -0.22
PTPN6-220ENST00000543115 IBSPP21815 317 aaPredicted RBP13.65□□□□□ -0.22
PTPN6-220ENST00000543115 STK3Q13188 491 aa13.65□□□□□ -0.22
PTPN6-220ENST00000543115 CAMK1Q14012 370 aa13.65□□□□□ -0.22
PTPN6-220ENST00000543115 NPY5RQ15761 445 aa13.65□□□□□ -0.22
PTPN6-220ENST00000543115 UGCGQ16739 394 aa13.65□□□□□ -0.22
PTPN6-220ENST00000543115 KIZQ2M2Z5 673 aa13.65□□□□□ -0.22
PTPN6-220ENST00000543115 CMTR2Q8IYT2 770 aaKnown RBP13.65□□□□□ -0.22
PTPN6-220ENST00000543115 TBCKQ8TEA7 893 aa13.65□□□□□ -0.22
PTPN6-220ENST00000543115 PABPC5Q96DU9 382 aaKnown RBP13.65□□□□□ -0.22
PTPN6-220ENST00000543115 AIFM3Q96NN9 605 aa13.65□□□□□ -0.22
PTPN6-220ENST00000543115 OSMRQ99650 979 aa13.65□□□□□ -0.22
PTPN6-220ENST00000543115 LMAN2LQ9H0V9 348 aa13.65□□□□□ -0.22
PTPN6-220ENST00000543115 ALG13Q9NP73 1137 aaKnown RBP13.65□□□□□ -0.22
PTPN6-220ENST00000543115 SAMM50Q9Y512 469 aa13.65□□□□□ -0.22
PTPN6-220ENST00000543115 CYP46A1Q9Y6A2 500 aa13.65□□□□□ -0.22
PTPN6-220ENST00000543115 WDR64B1ANS9 1081 aa13.64□□□□□ -0.23
PTPN6-220ENST00000543115 M0R2N6 131 aa13.64□□□□□ -0.23
PTPN6-220ENST00000543115 CHMP2AO43633 222 aa13.64□□□□□ -0.23
PTPN6-220ENST00000543115 DTNBO60941 627 aa13.64□□□□□ -0.23
PTPN6-220ENST00000543115 TDP2O95551 362 aa13.64□□□□□ -0.23
PTPN6-220ENST00000543115 STAG3L1P0CL83 205 aa13.64□□□□□ -0.23
PTPN6-220ENST00000543115 DNAJB1P25685 340 aa13.64□□□□□ -0.23
PTPN6-220ENST00000543115 GTF2F1P35269 517 aaKnown RBP eCLIP13.64□□□□□ -0.23
PTPN6-220ENST00000543115 LTBRP36941 435 aa13.64□□□□□ -0.23
PTPN6-220ENST00000543115 SARSP49591 514 aaKnown RBP13.64□□□□□ -0.23
PTPN6-220ENST00000543115 USP11P51784 963 aa13.64□□□□□ -0.23
PTPN6-220ENST00000543115 CLCN3P51790 818 aa13.64□□□□□ -0.23
PTPN6-220ENST00000543115 SSRP1Q08945 709 aaKnown RBP13.64□□□□□ -0.23
PTPN6-220ENST00000543115 HYAL1Q12794 435 aa13.64□□□□□ -0.23
PTPN6-220ENST00000543115 PTCRAQ6ISU1 281 aaPredicted RBP13.64□□□□□ -0.23
PTPN6-220ENST00000543115 EP400NLQ6ZTU2 488 aa13.64□□□□□ -0.23
PTPN6-220ENST00000543115 FAM228AQ86W67 206 aa13.64□□□□□ -0.23
PTPN6-220ENST00000543115 TRIM22Q8IYM9 498 aa13.64□□□□□ -0.23
PTPN6-220ENST00000543115 METTL13Q8N6R0 699 aa13.64□□□□□ -0.23
PTPN6-220ENST00000543115 LINC01465Q8N7H1 131 aa13.64□□□□□ -0.23
PTPN6-220ENST00000543115 SLC5A5Q92911 643 aa13.64□□□□□ -0.23
PTPN6-220ENST00000543115 ZNF274Q96GC6 653 aaPredicted RBP13.64□□□□□ -0.23
PTPN6-220ENST00000543115 ADAM2Q99965 735 aa13.64□□□□□ -0.23
PTPN6-220ENST00000543115 TM6SF1Q9BZW5 370 aa13.64□□□□□ -0.23
PTPN6-220ENST00000543115 UNC45AQ9H3U1 944 aa13.64□□□□□ -0.23
PTPN6-220ENST00000543115 DISC1Q9NRI5 854 aa13.64□□□□□ -0.23
PTPN6-220ENST00000543115 CLDND1Q9NY35 253 aa13.64□□□□□ -0.23
PTPN6-220ENST00000543115 TCEAL9Q9UHQ7 104 aa13.64□□□□□ -0.23
PTPN6-220ENST00000543115 PCDHA4Q9UN74 947 aa13.64□□□□□ -0.23
PTPN6-220ENST00000543115 ST3GAL5Q9UNP4 418 aa13.64□□□□□ -0.23
PTPN6-220ENST00000543115 PLAGL2Q9UPG8 496 aa13.64□□□□□ -0.23
PTPN6-220ENST00000543115 TTC3P53804 2025 aa13.64□□□□□ -0.23
PTPN6-220ENST00000543115 GRXCR2A6NFK2 248 aa13.63□□□□□ -0.23
PTPN6-220ENST00000543115 C9IYK1 514 aa13.63□□□□□ -0.23
PTPN6-220ENST00000543115 PSMD10O75832 226 aa13.63□□□□□ -0.23
PTPN6-220ENST00000543115 DEXIO95424 95 aa13.63□□□□□ -0.23
PTPN6-220ENST00000543115 MMP1P03956 469 aa13.63□□□□□ -0.23
PTPN6-220ENST00000543115 ITGB1P05556 798 aa13.63□□□□□ -0.23
PTPN6-220ENST00000543115 CRYBB1P53674 252 aaPredicted RBP13.63□□□□□ -0.23
PTPN6-220ENST00000543115 DLX2Q07687 328 aaPredicted RBP13.63□□□□□ -0.23
PTPN6-220ENST00000543115 CTC1Q2NKJ3 1217 aa13.63□□□□□ -0.23
PTPN6-220ENST00000543115 FAM178BQ8IXR5 827 aa13.63□□□□□ -0.23
PTPN6-220ENST00000543115 BLIDQ8IZY5 108 aa13.63□□□□□ -0.23
PTPN6-220ENST00000543115 LRRC71Q8N4P6 559 aa13.63□□□□□ -0.23
PTPN6-220ENST00000543115 P2RX5Q93086 422 aa13.63□□□□□ -0.23
PTPN6-220ENST00000543115 RIT2Q99578 217 aa13.63□□□□□ -0.23
PTPN6-220ENST00000543115 PLVAPQ9BX97 442 aa13.63□□□□□ -0.23
PTPN6-220ENST00000543115 RGS18Q9NS28 235 aa13.63□□□□□ -0.23
PTPN6-220ENST00000543115 HCSTQ9UBK5 93 aa13.63□□□□□ -0.23
PTPN6-220ENST00000543115 LRFN2Q9ULH4 789 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms