RNA–Protein interactions for RNA: ENST00000542877.5

TNC-212, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 5,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-212ENST00000542877 TBC1D9BQ66K14 1250 aa14.07□□□□□ -0.16
TNC-212ENST00000542877 C4orf50Q6ZRC1 276 aa14.07□□□□□ -0.16
TNC-212ENST00000542877 METTL23Q86XA0 190 aa14.07□□□□□ -0.16
TNC-212ENST00000542877 DHX40Q8IX18 779 aaKnown RBP14.07□□□□□ -0.16
TNC-212ENST00000542877 SUDS3Q9H7L9 328 aaPredicted RBP14.07□□□□□ -0.16
TNC-212ENST00000542877 SPAG7O75391 227 aa14.07□□□□□ -0.16
TNC-212ENST00000542877 CD58P19256 250 aa14.07□□□□□ -0.16
TNC-212ENST00000542877 LRRC4Q9HBW1 653 aa14.07□□□□□ -0.16
TNC-212ENST00000542877 GJB4Q9NTQ9 266 aa14.07□□□□□ -0.16
TNC-212ENST00000542877 MRFAP1Q9Y605 127 aa14.07□□□□□ -0.16
TNC-212ENST00000542877 ERBB3P21860 1342 aa14.07□□□□□ -0.16
TNC-212ENST00000542877 CFAP74Q9C0B2 1584 aa14.07□□□□□ -0.16
TNC-212ENST00000542877 MYO5CQ9NQX4 1742 aa14.07□□□□□ -0.16
TNC-212ENST00000542877 COPEO14579 308 aa14.07□□□□□ -0.16
TNC-212ENST00000542877 MRPS25P82663 173 aaKnown RBP14.07□□□□□ -0.16
TNC-212ENST00000542877 MB21D2Q8IYB1 491 aaPredicted RBP14.07□□□□□ -0.16
TNC-212ENST00000542877 RAD54LQ92698 747 aa14.07□□□□□ -0.16
TNC-212ENST00000542877 SLC12A6Q9UHW9 1150 aa14.07□□□□□ -0.16
TNC-212ENST00000542877 RASA4BC9J798 803 aa14.07□□□□□ -0.16
TNC-212ENST00000542877 GSTA4O15217 222 aa14.07□□□□□ -0.16
TNC-212ENST00000542877 RASA4O43374 803 aa14.07□□□□□ -0.16
TNC-212ENST00000542877 ZRANB2O95218 330 aaKnown RBP eCLIP14.07□□□□□ -0.16
TNC-212ENST00000542877 MTERF2Q49AM1 385 aa14.07□□□□□ -0.16
TNC-212ENST00000542877 NBPF10Q6P3W6 841 aaKnown RBP14.07□□□□□ -0.16
TNC-212ENST00000542877 ZNF526Q8TF50 670 aaPredicted RBP14.07□□□□□ -0.16
TNC-212ENST00000542877 NRBF2Q96F24 287 aa14.07□□□□□ -0.16
TNC-212ENST00000542877 TTC1Q99614 292 aa14.07□□□□□ -0.16
TNC-212ENST00000542877 CNOT8Q9UFF9 292 aaKnown RBP14.07□□□□□ -0.16
TNC-212ENST00000542877 GYG2O15488 501 aa14.06□□□□□ -0.16
TNC-212ENST00000542877 CTIFO43310 598 aaKnown RBP14.06□□□□□ -0.16
TNC-212ENST00000542877 KLC2Q9H0B6 622 aa14.06□□□□□ -0.16
TNC-212ENST00000542877 DNAJC17Q9NVM6 304 aaKnown RBP14.06□□□□□ -0.16
TNC-212ENST00000542877 NCAPD2Q15021 1401 aa14.06□□□□□ -0.16
TNC-212ENST00000542877 NEDD4P46934 1319 aa14.06□□□□□ -0.16
TNC-212ENST00000542877 NR3C1P04150 777 aa14.06□□□□□ -0.16
TNC-212ENST00000542877 PMS2P54278 862 aa14.06□□□□□ -0.16
TNC-212ENST00000542877 MDM2Q00987 491 aaPredicted RBP14.06□□□□□ -0.16
TNC-212ENST00000542877 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.06□□□□□ -0.16
TNC-212ENST00000542877 FOXP4Q8IVH2 680 aaPredicted RBP14.06□□□□□ -0.16
TNC-212ENST00000542877 ANAPC7Q9UJX3 599 aa14.06□□□□□ -0.16
TNC-212ENST00000542877 CFLARO15519 480 aa14.06□□□□□ -0.16
TNC-212ENST00000542877 KRT38O76015 456 aa14.06□□□□□ -0.16
TNC-212ENST00000542877 PSMA2P25787 234 aa14.06□□□□□ -0.16
TNC-212ENST00000542877 MAGOHP61326 146 aaKnown RBP14.06□□□□□ -0.16
TNC-212ENST00000542877 CCNA1P78396 465 aa14.06□□□□□ -0.16
TNC-212ENST00000542877 GFPT1Q06210 699 aaPredicted RBP14.06□□□□□ -0.16
TNC-212ENST00000542877 C7orf31Q8N865 590 aa14.06□□□□□ -0.16
TNC-212ENST00000542877 RUBCNQ92622 972 aa14.06□□□□□ -0.16
TNC-212ENST00000542877 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.06□□□□□ -0.16
TNC-212ENST00000542877 A0A0G2JND7 137 aa14.06□□□□□ -0.16
TNC-212ENST00000542877 A0A1W2PQC6 194 aa14.06□□□□□ -0.16
TNC-212ENST00000542877 CLRN2A0PK11 232 aa14.06□□□□□ -0.16
TNC-212ENST00000542877 TARSL2A2RTX5 802 aaKnown RBP14.06□□□□□ -0.16
TNC-212ENST00000542877 TMPRSS15P98073 1019 aa14.06□□□□□ -0.16
TNC-212ENST00000542877 KLHL38Q2WGJ6 581 aa14.06□□□□□ -0.16
TNC-212ENST00000542877 GRAMD1BQ3KR37 738 aa14.06□□□□□ -0.16
TNC-212ENST00000542877 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.06□□□□□ -0.16
TNC-212ENST00000542877 ADAM22Q9P0K1 906 aa14.06□□□□□ -0.16
TNC-212ENST00000542877 TYW5A2RUC4 315 aaKnown RBP14.05□□□□□ -0.16
TNC-212ENST00000542877 GOLGA8IPA6NC78 632 aa14.05□□□□□ -0.16
TNC-212ENST00000542877 GOLGA8JA6NMD2 632 aa14.05□□□□□ -0.16
TNC-212ENST00000542877 FAM83BQ5T0W9 1011 aa14.05□□□□□ -0.16
TNC-212ENST00000542877 KLC3Q6P597 504 aa14.05□□□□□ -0.16
TNC-212ENST00000542877 CYB5R4Q7L1T6 521 aa14.05□□□□□ -0.16
TNC-212ENST00000542877 EPM2AIP1Q7L775 607 aaPredicted RBP14.05□□□□□ -0.16
TNC-212ENST00000542877 PIP4K2CQ8TBX8 421 aa14.05□□□□□ -0.16
TNC-212ENST00000542877 DCAF4Q8WV16 495 aa14.05□□□□□ -0.16
TNC-212ENST00000542877 FAF2Q96CS3 445 aa14.05□□□□□ -0.16
TNC-212ENST00000542877 MSTO1Q9BUK6 570 aa14.05□□□□□ -0.16
TNC-212ENST00000542877 TRIM15Q9C019 465 aa14.05□□□□□ -0.16
TNC-212ENST00000542877 STOML1Q9UBI4 398 aa14.05□□□□□ -0.16
TNC-212ENST00000542877 INTUQ9ULD6 942 aa14.05□□□□□ -0.16
TNC-212ENST00000542877 ZDHHC9Q9Y397 364 aa14.05□□□□□ -0.16
TNC-212ENST00000542877 USP27XA6NNY8 438 aa14.05□□□□□ -0.16
TNC-212ENST00000542877 SERPINB2P05120 415 aa14.05□□□□□ -0.16
TNC-212ENST00000542877 KCNH2Q12809 1159 aa14.05□□□□□ -0.16
TNC-212ENST00000542877 BEND6Q5SZJ8 279 aaPredicted RBP14.05□□□□□ -0.16
TNC-212ENST00000542877 PPP1R18Q6NYC8 613 aa14.05□□□□□ -0.16
TNC-212ENST00000542877 ZBTB33Q86T24 672 aa14.05□□□□□ -0.16
TNC-212ENST00000542877 MYLK4Q86YV6 388 aaPredicted RBP14.05□□□□□ -0.16
TNC-212ENST00000542877 DHX38Q92620 1227 aaKnown RBP14.05□□□□□ -0.16
TNC-212ENST00000542877 HEXIM2Q96MH2 286 aaKnown RBP14.05□□□□□ -0.16
TNC-212ENST00000542877 TSC22D3Q99576 134 aa14.05□□□□□ -0.16
TNC-212ENST00000542877 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.05□□□□□ -0.16
TNC-212ENST00000542877 FAM187AA6NFU0 413 aa14.05□□□□□ -0.16
TNC-212ENST00000542877 K7ERI5 159 aa14.05□□□□□ -0.16
TNC-212ENST00000542877 CHRNA3P32297 505 aa14.05□□□□□ -0.16
TNC-212ENST00000542877 BAG6P46379 1132 aa14.05□□□□□ -0.16
TNC-212ENST00000542877 HDLBPQ00341 1268 aaKnown RBP14.05□□□□□ -0.16
TNC-212ENST00000542877 SIX6OS1Q8N1H7 587 aa14.05□□□□□ -0.16
TNC-212ENST00000542877 MORC4Q8TE76 937 aa14.05□□□□□ -0.16
TNC-212ENST00000542877 ZC3H15Q8WU90 426 aaKnown RBP14.05□□□□□ -0.16
TNC-212ENST00000542877 TTC17Q96AE7 1141 aa14.05□□□□□ -0.16
TNC-212ENST00000542877 TAF1DQ9H5J8 278 aaPredicted RBP14.05□□□□□ -0.16
TNC-212ENST00000542877 KIAA1586Q9HCI6 787 aa14.05□□□□□ -0.16
TNC-212ENST00000542877 PPARGC1AQ9UBK2 798 aaKnown RBP14.05□□□□□ -0.16
TNC-212ENST00000542877 FIS1Q9Y3D6 152 aa14.05□□□□□ -0.16
TNC-212ENST00000542877 HSPA4LO95757 839 aa14.05□□□□□ -0.16
TNC-212ENST00000542877 TFDP2Q14188 446 aa14.05□□□□□ -0.16
TNC-212ENST00000542877 ARMCX2Q7L311 632 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms