RNA–Protein interactions for RNA: ENST00000542838.5

DDX11-223, Transcript of DEAD/H-box helicase 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX11, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-223ENST00000542838 NT5DC3Q86UY8 548 aa14.09□□□□□ -0.15
DDX11-223ENST00000542838 RAPGEF5Q92565 580 aa14.09□□□□□ -0.15
DDX11-223ENST00000542838 MAGOHBQ96A72 148 aaKnown RBP14.09□□□□□ -0.15
DDX11-223ENST00000542838 ACTR5Q9H9F9 607 aaPredicted RBP14.09□□□□□ -0.15
DDX11-223ENST00000542838 CD248Q9HCU0 757 aa14.09□□□□□ -0.15
DDX11-223ENST00000542838 SLC40A1Q9NP59 571 aa14.09□□□□□ -0.15
DDX11-223ENST00000542838 FAM114A2Q9NRY5 505 aa14.09□□□□□ -0.15
DDX11-223ENST00000542838 ATF5Q9Y2D1 282 aaPredicted RBP14.09□□□□□ -0.15
DDX11-223ENST00000542838 A0A0A6YYK5 440 aaPredicted RBP14.08□□□□□ -0.16
DDX11-223ENST00000542838 AKAP3O75969 853 aa14.08□□□□□ -0.16
DDX11-223ENST00000542838 RFC4P35249 363 aa14.08□□□□□ -0.16
DDX11-223ENST00000542838 PABPC4Q13310 644 aaKnown RBP eCLIP14.08□□□□□ -0.16
DDX11-223ENST00000542838 GJB7Q6PEY0 223 aa14.08□□□□□ -0.16
DDX11-223ENST00000542838 C15orf52Q6ZUT6 534 aaKnown RBP14.08□□□□□ -0.16
DDX11-223ENST00000542838 SEC16BQ96JE7 1060 aa14.08□□□□□ -0.16
DDX11-223ENST00000542838 TRIM31Q9BZY9 425 aa14.08□□□□□ -0.16
DDX11-223ENST00000542838 KCNMB3Q9NPA1 279 aa14.08□□□□□ -0.16
DDX11-223ENST00000542838 AMFRQ9UKV5 643 aa14.08□□□□□ -0.16
DDX11-223ENST00000542838 LOC102724159A0A0B4J2E5 919 aa14.08□□□□□ -0.16
DDX11-223ENST00000542838 IGKV6D-41A0A0C4DH26 115 aa14.08□□□□□ -0.16
DDX11-223ENST00000542838 DCDC2CA8MYV0 355 aa14.08□□□□□ -0.16
DDX11-223ENST00000542838 MEIS1O00470 390 aa14.08□□□□□ -0.16
DDX11-223ENST00000542838 DDX3XO00571 662 aaKnown RBP eCLIP14.08□□□□□ -0.16
DDX11-223ENST00000542838 RASSF9O75901 435 aa14.08□□□□□ -0.16
DDX11-223ENST00000542838 MAP2K2P36507 400 aa14.08□□□□□ -0.16
DDX11-223ENST00000542838 PSMC6P62333 389 aa14.08□□□□□ -0.16
DDX11-223ENST00000542838 IFFO1Q0D2I5 559 aa14.08□□□□□ -0.16
DDX11-223ENST00000542838 PWP2Q15269 919 aaKnown RBP14.08□□□□□ -0.16
DDX11-223ENST00000542838 FAM163AQ96GL9 167 aaPredicted RBP14.08□□□□□ -0.16
DDX11-223ENST00000542838 SIX2Q9NPC8 291 aa14.08□□□□□ -0.16
DDX11-223ENST00000542838 GCNT4Q9P109 453 aa14.08□□□□□ -0.16
DDX11-223ENST00000542838 SWAP70Q9UH65 585 aa14.08□□□□□ -0.16
DDX11-223ENST00000542838 NENFQ9UMX5 172 aa14.08□□□□□ -0.16
DDX11-223ENST00000542838 SPATA31A5Q5VU36 1347 aa14.08□□□□□ -0.16
DDX11-223ENST00000542838 SPATA31A7Q8IWB4 1347 aa14.08□□□□□ -0.16
DDX11-223ENST00000542838 ZNF831Q5JPB2 1677 aa14.07□□□□□ -0.16
DDX11-223ENST00000542838 F8VZ95 297 aa14.07□□□□□ -0.16
DDX11-223ENST00000542838 ANXA13P27216 316 aa14.07□□□□□ -0.16
DDX11-223ENST00000542838 HOXD13P35453 343 aa14.07□□□□□ -0.16
DDX11-223ENST00000542838 CDR1P51861 262 aa14.07□□□□□ -0.16
DDX11-223ENST00000542838 GABPAQ06546 454 aa14.07□□□□□ -0.16
DDX11-223ENST00000542838 RC3H1Q5TC82 1133 aaKnown RBP14.07□□□□□ -0.16
DDX11-223ENST00000542838 CATSPER3Q86XQ3 398 aa14.07□□□□□ -0.16
DDX11-223ENST00000542838 CACNA2D3Q8IZS8 1091 aa14.07□□□□□ -0.16
DDX11-223ENST00000542838 REEP2Q9BRK0 252 aa14.07□□□□□ -0.16
DDX11-223ENST00000542838 TRIM51Q9BSJ1 452 aa14.07□□□□□ -0.16
DDX11-223ENST00000542838 OSBPL7Q9BZF2 842 aa14.07□□□□□ -0.16
DDX11-223ENST00000542838 RTCBQ9Y3I0 505 aaKnown RBP14.07□□□□□ -0.16
DDX11-223ENST00000542838 PDXKO00764 312 aa14.07□□□□□ -0.16
DDX11-223ENST00000542838 CHUKO15111 745 aa14.07□□□□□ -0.16
DDX11-223ENST00000542838 GFPT2O94808 682 aa14.07□□□□□ -0.16
DDX11-223ENST00000542838 IL1R1P14778 569 aa14.07□□□□□ -0.16
DDX11-223ENST00000542838 CASP4P49662 377 aa14.07□□□□□ -0.16
DDX11-223ENST00000542838 GALCP54803 685 aa14.07□□□□□ -0.16
DDX11-223ENST00000542838 JAM2P57087 298 aa14.07□□□□□ -0.16
DDX11-223ENST00000542838 HES6Q96HZ4 224 aa14.07□□□□□ -0.16
DDX11-223ENST00000542838 INTUQ9ULD6 942 aa14.07□□□□□ -0.16
DDX11-223ENST00000542838 ATP8A1Q9Y2Q0 1164 aa14.07□□□□□ -0.16
DDX11-223ENST00000542838 GAKO14976 1311 aa14.07□□□□□ -0.16
DDX11-223ENST00000542838 CLIC2O15247 247 aa14.06□□□□□ -0.16
DDX11-223ENST00000542838 SLC26A4O43511 780 aa14.06□□□□□ -0.16
DDX11-223ENST00000542838 FGGP02679 453 aa14.06□□□□□ -0.16
DDX11-223ENST00000542838 RDXP35241 583 aaKnown RBP14.06□□□□□ -0.16
DDX11-223ENST00000542838 NPEPPSP55786 919 aa14.06□□□□□ -0.16
DDX11-223ENST00000542838 GPATCH4Q5T3I0 446 aaKnown RBP14.06□□□□□ -0.16
DDX11-223ENST00000542838 SLFN12Q8IYM2 578 aa14.06□□□□□ -0.16
DDX11-223ENST00000542838 ARHGEF1Q92888 912 aaKnown RBP14.06□□□□□ -0.16
DDX11-223ENST00000542838 PSMD1Q99460 953 aa14.06□□□□□ -0.16
DDX11-223ENST00000542838 ANO3Q9BYT9 981 aa14.06□□□□□ -0.16
DDX11-223ENST00000542838 METTL14Q9HCE5 456 aaKnown RBP14.06□□□□□ -0.16
DDX11-223ENST00000542838 LRRC4CQ9HCJ2 640 aa14.06□□□□□ -0.16
DDX11-223ENST00000542838 A1CFQ9NQ94 594 aaKnown RBP14.06□□□□□ -0.16
DDX11-223ENST00000542838 DNM3Q9UQ16 869 aa14.06□□□□□ -0.16
DDX11-223ENST00000542838 ATP8B3O60423 1300 aa14.06□□□□□ -0.16
DDX11-223ENST00000542838 NRAPQ86VF7 1730 aa14.06□□□□□ -0.16
DDX11-223ENST00000542838 C5orf60A6NFR6 353 aa14.06□□□□□ -0.16
DDX11-223ENST00000542838 NR3C1P04150 777 aa14.06□□□□□ -0.16
DDX11-223ENST00000542838 PAEPP09466 180 aa14.06□□□□□ -0.16
DDX11-223ENST00000542838 PRPF4BQ13523 1007 aaKnown RBP14.06□□□□□ -0.16
DDX11-223ENST00000542838 SPRED3Q2MJR0 410 aa14.06□□□□□ -0.16
DDX11-223ENST00000542838 EPM2AIP1Q7L775 607 aaPredicted RBP14.06□□□□□ -0.16
DDX11-223ENST00000542838 PTF1AQ7RTS3 328 aa14.06□□□□□ -0.16
DDX11-223ENST00000542838 CPLX4Q7Z7G2 160 aa14.06□□□□□ -0.16
DDX11-223ENST00000542838 SEC14L1Q92503 715 aa14.06□□□□□ -0.16
DDX11-223ENST00000542838 OSGEPQ9NPF4 335 aa14.06□□□□□ -0.16
DDX11-223ENST00000542838 DAGLAQ9Y4D2 1042 aa14.06□□□□□ -0.16
DDX11-223ENST00000542838 DNM1LO00429 736 aa14.06□□□□□ -0.16
DDX11-223ENST00000542838 MPHOSPH10O00566 681 aaKnown RBP14.06□□□□□ -0.16
DDX11-223ENST00000542838 RAD21O60216 631 aa14.06□□□□□ -0.16
DDX11-223ENST00000542838 FERP16591 822 aa14.06□□□□□ -0.16
DDX11-223ENST00000542838 ANKRD20A8PQ5CZ79 823 aa14.06□□□□□ -0.16
DDX11-223ENST00000542838 SYT2Q8N9I0 419 aaPredicted RBP14.06□□□□□ -0.16
DDX11-223ENST00000542838 ERMNQ8TAM6 284 aa14.06□□□□□ -0.16
DDX11-223ENST00000542838 LNX1Q8TBB1 728 aaPredicted RBP14.06□□□□□ -0.16
DDX11-223ENST00000542838 ZKSCAN4Q969J2 545 aaPredicted RBP14.06□□□□□ -0.16
DDX11-223ENST00000542838 SLC35C1Q96A29 364 aa14.06□□□□□ -0.16
DDX11-223ENST00000542838 FMO2Q99518 471 aa14.06□□□□□ -0.16
DDX11-223ENST00000542838 TYW1Q9NV66 732 aaKnown RBP14.06□□□□□ -0.16
DDX11-223ENST00000542838 GGA1Q9UJY5 639 aa14.06□□□□□ -0.16
DDX11-223ENST00000542838 PCDHB13Q9Y5F0 798 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms