RNA–Protein interactions for RNA: ENST00000542717.1

CHD4-209, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 204 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-209ENST00000542717 CRNKL1Q9BZJ0 848 aaKnown RBP3.89□□□□□ -1.79
CHD4-209ENST00000542717 TMEM9BQ9NQ34 198 aa3.89□□□□□ -1.79
CHD4-209ENST00000542717 EPS15L1Q9UBC2 864 aa3.89□□□□□ -1.79
CHD4-209ENST00000542717 HCSTQ9UBK5 93 aa3.89□□□□□ -1.79
CHD4-209ENST00000542717 NXF1Q9UBU9 619 aaKnown RBP3.89□□□□□ -1.79
CHD4-209ENST00000542717 NAV1Q8NEY1 1877 aa3.89□□□□□ -1.79
CHD4-209ENST00000542717 NRCAMQ92823 1304 aa3.89□□□□□ -1.79
CHD4-209ENST00000542717 SALL3Q9BXA9 1300 aa3.89□□□□□ -1.79
CHD4-209ENST00000542717 AKAP13Q12802 2813 aa3.89□□□□□ -1.79
CHD4-209ENST00000542717 PTPRQQ9UMZ3 2332 aa3.88□□□□□ -1.79
CHD4-209ENST00000542717 ITPR1Q14643 2758 aa3.88□□□□□ -1.79
CHD4-209ENST00000542717 FAM205CA6NFA0 338 aa3.88□□□□□ -1.79
CHD4-209ENST00000542717 H3BRB1 525 aa3.88□□□□□ -1.79
CHD4-209ENST00000542717 CHRNA1P02708 482 aa3.88□□□□□ -1.79
CHD4-209ENST00000542717 CAPNS1P04632 268 aa3.88□□□□□ -1.79
CHD4-209ENST00000542717 MYBP10242 640 aa3.88□□□□□ -1.79
CHD4-209ENST00000542717 BMP3P12645 472 aa3.88□□□□□ -1.79
CHD4-209ENST00000542717 GP1BBP13224 206 aa3.88□□□□□ -1.79
CHD4-209ENST00000542717 TDGF1P13385 188 aa3.88□□□□□ -1.79
CHD4-209ENST00000542717 LAMP2P13473 410 aa3.88□□□□□ -1.79
CHD4-209ENST00000542717 KLRC2P26717 231 aa3.88□□□□□ -1.79
CHD4-209ENST00000542717 PBX3P40426 434 aa3.88□□□□□ -1.79
CHD4-209ENST00000542717 CSRP3P50461 194 aa3.88□□□□□ -1.79
CHD4-209ENST00000542717 STAT2P52630 851 aa3.88□□□□□ -1.79
CHD4-209ENST00000542717 ARHGAP4P98171 946 aa3.88□□□□□ -1.79
CHD4-209ENST00000542717 CREB5Q02930 508 aa3.88□□□□□ -1.79
CHD4-209ENST00000542717 HTR4Q13639 388 aa3.88□□□□□ -1.79
CHD4-209ENST00000542717 LAMC2Q13753 1193 aa3.88□□□□□ -1.79
CHD4-209ENST00000542717 GIT2Q14161 759 aa3.88□□□□□ -1.79
CHD4-209ENST00000542717 CCDC158Q5M9N0 1113 aa3.88□□□□□ -1.79
CHD4-209ENST00000542717 FAM102BQ5T8I3 360 aa3.88□□□□□ -1.79
CHD4-209ENST00000542717 ELMSAN1Q6PJG2 1045 aa3.88□□□□□ -1.79
CHD4-209ENST00000542717 KCNT2Q6UVM3 1135 aa3.88□□□□□ -1.79
CHD4-209ENST00000542717 RNF207Q6ZRF8 634 aa3.88□□□□□ -1.79
CHD4-209ENST00000542717 C15orf39Q6ZRI6 1047 aa3.88□□□□□ -1.79
CHD4-209ENST00000542717 TSHZ1Q6ZSZ6 1077 aa3.88□□□□□ -1.79
CHD4-209ENST00000542717 CACNA2D4Q7Z3S7 1137 aa3.88□□□□□ -1.79
CHD4-209ENST00000542717 VPS52Q8N1B4 723 aa3.88□□□□□ -1.79
CHD4-209ENST00000542717 SDR42E1Q8WUS8 393 aa3.88□□□□□ -1.79
CHD4-209ENST00000542717 LINC01599Q8WXQ3 324 aa3.88□□□□□ -1.79
CHD4-209ENST00000542717 AUTS2Q8WXX7 1259 aa3.88□□□□□ -1.79
CHD4-209ENST00000542717 SMG7Q92540 1137 aaKnown RBP3.88□□□□□ -1.79
CHD4-209ENST00000542717 PHKBQ93100 1093 aa3.88□□□□□ -1.79
CHD4-209ENST00000542717 TMEM169Q96HH4 297 aa3.88□□□□□ -1.79
CHD4-209ENST00000542717 SPATA33Q96N06 139 aa3.88□□□□□ -1.79
CHD4-209ENST00000542717 FCRL3Q96P31 734 aaPredicted RBP3.88□□□□□ -1.79
CHD4-209ENST00000542717 RPP25Q9BUL9 199 aaKnown RBP3.88□□□□□ -1.79
CHD4-209ENST00000542717 CCDC8Q9H0W5 538 aaPredicted RBP3.88□□□□□ -1.79
CHD4-209ENST00000542717 CHRDQ9H2X0 955 aa3.88□□□□□ -1.79
CHD4-209ENST00000542717 RNPEPQ9H4A4 650 aa3.88□□□□□ -1.79
CHD4-209ENST00000542717 TUT1Q9H6E5 874 aaKnown RBP3.88□□□□□ -1.79
CHD4-209ENST00000542717 LMAN1LQ9HAT1 526 aa3.88□□□□□ -1.79
CHD4-209ENST00000542717 WDR6Q9NNW5 1121 aaKnown RBP3.88□□□□□ -1.79
CHD4-209ENST00000542717 PIH1D3Q9NQM4 214 aaKnown RBP3.88□□□□□ -1.79
CHD4-209ENST00000542717 SETD4Q9NVD3 440 aa3.88□□□□□ -1.79
CHD4-209ENST00000542717 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP3.88□□□□□ -1.79
CHD4-209ENST00000542717 SPG21Q9NZD8 308 aa3.88□□□□□ -1.79
CHD4-209ENST00000542717 CLIP2Q9UDT6 1046 aa3.88□□□□□ -1.79
CHD4-209ENST00000542717 DDX41Q9UJV9 622 aaKnown RBP3.88□□□□□ -1.79
CHD4-209ENST00000542717 PCDHGA5Q9Y5G8 931 aa3.88□□□□□ -1.79
CHD4-209ENST00000542717 MRVI1Q9Y6F6 885 aa3.88□□□□□ -1.79
CHD4-209ENST00000542717 CACNA1FO60840 1977 aa3.88□□□□□ -1.79
CHD4-209ENST00000542717 DOPEY2Q9Y3R5 2298 aa3.88□□□□□ -1.79
CHD4-209ENST00000542717 CLUHO75153 1309 aa3.88□□□□□ -1.79
CHD4-209ENST00000542717 DOCK8Q8NF50 2099 aa3.88□□□□□ -1.79
CHD4-209ENST00000542717 DENND4AQ7Z401 1863 aa3.88□□□□□ -1.79
CHD4-209ENST00000542717 MYH8P13535 1937 aa3.87□□□□□ -1.79
CHD4-209ENST00000542717 APC2O95996 2303 aa3.87□□□□□ -1.79
CHD4-209ENST00000542717 FREM2Q5SZK8 3169 aa3.87□□□□□ -1.79
CHD4-209ENST00000542717 CCDC195A0A1B0GUA6 201 aa3.87□□□□□ -1.79
CHD4-209ENST00000542717 FAM221BA6H8Z2 402 aa3.87□□□□□ -1.79
CHD4-209ENST00000542717 B8ZZF3 427 aa3.87□□□□□ -1.79
CHD4-209ENST00000542717 M0QZ92 97 aa3.87□□□□□ -1.79
CHD4-209ENST00000542717 NFIBO00712 420 aa3.87□□□□□ -1.79
CHD4-209ENST00000542717 KHNYNO15037 678 aaKnown RBP3.87□□□□□ -1.79
CHD4-209ENST00000542717 PPFIA4O75335 1185 aa3.87□□□□□ -1.79
CHD4-209ENST00000542717 RPP40O75818 363 aaKnown RBP3.87□□□□□ -1.79
CHD4-209ENST00000542717 CAVIN2O95810 425 aa3.87□□□□□ -1.79
CHD4-209ENST00000542717 PDE4AP27815 886 aa3.87□□□□□ -1.79
CHD4-209ENST00000542717 ZAP70P43403 619 aa3.87□□□□□ -1.79
CHD4-209ENST00000542717 ALDH7A1P49419 539 aaKnown RBP3.87□□□□□ -1.79
CHD4-209ENST00000542717 METAP2P50579 478 aaKnown RBP eCLIP3.87□□□□□ -1.796e-12■■■□□ 17.5
CHD4-209ENST00000542717 NFX1Q12986 1120 aaKnown RBP3.87□□□□□ -1.79
CHD4-209ENST00000542717 PAK2Q13177 524 aa3.87□□□□□ -1.79
CHD4-209ENST00000542717 ZNF423Q2M1K9 1284 aa3.87□□□□□ -1.79
CHD4-209ENST00000542717 FAM26DQ5JW98 314 aa3.87□□□□□ -1.79
CHD4-209ENST00000542717 FBXO47Q5MNV8 452 aa3.87□□□□□ -1.79
CHD4-209ENST00000542717 PLA2G2CQ5R387 149 aa3.87□□□□□ -1.79
CHD4-209ENST00000542717 SLFN13Q68D06 897 aa3.87□□□□□ -1.79
CHD4-209ENST00000542717 CCDC62Q6P9F0 684 aa3.87□□□□□ -1.79
CHD4-209ENST00000542717 SLC30A10Q6XR72 485 aa3.87□□□□□ -1.79
CHD4-209ENST00000542717 LRRC69Q6ZNQ3 347 aa3.87□□□□□ -1.79
CHD4-209ENST00000542717 PRICKLE2Q7Z3G6 844 aa3.87□□□□□ -1.79
CHD4-209ENST00000542717 RTN4RL1Q86UN2 441 aaPredicted RBP3.87□□□□□ -1.79
CHD4-209ENST00000542717 FAM160B2Q86V87 743 aa3.87□□□□□ -1.79
CHD4-209ENST00000542717 KBTBD6Q86V97 674 aa3.87□□□□□ -1.79
CHD4-209ENST00000542717 RPAP2Q8IXW5 612 aaPredicted RBP3.87□□□□□ -1.79
CHD4-209ENST00000542717 ABI1Q8IZP0 508 aa3.87□□□□□ -1.79
CHD4-209ENST00000542717 STK11IPQ8N1F8 1099 aa3.87□□□□□ -1.79
CHD4-209ENST00000542717 PPTC7Q8NI37 304 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms