RNA–Protein interactions for RNA: ENST00000542552.1

ECHDC2-223, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 1 (best)

Gene ECHDC2, Length 981 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-223ENST00000542552 SLFN12Q8IYM2 578 aa17.4■□□□□ 0.38
ECHDC2-223ENST00000542552 FAM184AQ8NB25 1140 aa17.4■□□□□ 0.38
ECHDC2-223ENST00000542552 ZNF576Q9H609 170 aa17.4■□□□□ 0.38
ECHDC2-223ENST00000542552 NRBP2Q9NSY0 501 aa17.4■□□□□ 0.38
ECHDC2-223ENST00000542552 CEP131Q9UPN4 1083 aa17.4■□□□□ 0.38
ECHDC2-223ENST00000542552 STXBP5LQ9Y2K9 1186 aa17.4■□□□□ 0.38
ECHDC2-223ENST00000542552 SQORQ9Y6N5 450 aa17.4■□□□□ 0.38
ECHDC2-223ENST00000542552 LOXHD1Q8IVV2 1947 aa17.4■□□□□ 0.38
ECHDC2-223ENST00000542552 KDM3AQ9Y4C1 1321 aa17.4■□□□□ 0.38
ECHDC2-223ENST00000542552 GHRP10912 638 aa17.39■□□□□ 0.37
ECHDC2-223ENST00000542552 MYOGP15173 224 aa17.39■□□□□ 0.37
ECHDC2-223ENST00000542552 TARBP2Q15633 366 aaKnown RBP17.39■□□□□ 0.37
ECHDC2-223ENST00000542552 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.39■□□□□ 0.37
ECHDC2-223ENST00000542552 LINC01465Q8N7H1 131 aa17.39■□□□□ 0.37
ECHDC2-223ENST00000542552 APBB2Q92870 758 aa17.39■□□□□ 0.37
ECHDC2-223ENST00000542552 CDX2Q99626 313 aaPredicted RBP17.39■□□□□ 0.37
ECHDC2-223ENST00000542552 NIFKQ9BYG3 293 aaKnown RBP17.39■□□□□ 0.37
ECHDC2-223ENST00000542552 IFIH1Q9BYX4 1025 aaKnown RBP17.39■□□□□ 0.37
ECHDC2-223ENST00000542552 NKX2-4Q9H2Z4 354 aa17.39■□□□□ 0.37
ECHDC2-223ENST00000542552 PRUNE2Q8WUY3 3088 aa17.38■□□□□ 0.37
ECHDC2-223ENST00000542552 MAGEB2O15479 319 aa17.38■□□□□ 0.37
ECHDC2-223ENST00000542552 BAG4O95429 457 aaKnown RBP17.38■□□□□ 0.37
ECHDC2-223ENST00000542552 TMEM62Q0P6H9 643 aa17.38■□□□□ 0.37
ECHDC2-223ENST00000542552 GRIN2CQ14957 1233 aa17.38■□□□□ 0.37
ECHDC2-223ENST00000542552 XKR3Q5GH77 459 aa17.38■□□□□ 0.37
ECHDC2-223ENST00000542552 TSHZ1Q6ZSZ6 1077 aa17.38■□□□□ 0.37
ECHDC2-223ENST00000542552 USP38Q8NB14 1042 aa17.38■□□□□ 0.37
ECHDC2-223ENST00000542552 MTMR9Q96QG7 549 aa17.38■□□□□ 0.37
ECHDC2-223ENST00000542552 CEP89Q96ST8 783 aa17.38■□□□□ 0.37
ECHDC2-223ENST00000542552 CELF4Q9BZC1 486 aaKnown RBP17.38■□□□□ 0.37
ECHDC2-223ENST00000542552 SLC28A3Q9HAS3 691 aa17.38■□□□□ 0.37
ECHDC2-223ENST00000542552 TRPV2Q9Y5S1 764 aa17.38■□□□□ 0.37
ECHDC2-223ENST00000542552 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.37■□□□□ 0.37
ECHDC2-223ENST00000542552 NEMFO60524 1076 aa17.37■□□□□ 0.37
ECHDC2-223ENST00000542552 GJB5O95377 273 aa17.37■□□□□ 0.37
ECHDC2-223ENST00000542552 U2AF2P26368 475 aaKnown RBP eCLIP17.37■□□□□ 0.371e-11■■□□□ 13.1
ECHDC2-223ENST00000542552 PSMC5P62195 406 aa17.37■□□□□ 0.37
ECHDC2-223ENST00000542552 EPHA7Q15375 998 aa17.37■□□□□ 0.37
ECHDC2-223ENST00000542552 CALCRLQ16602 461 aa17.37■□□□□ 0.37
ECHDC2-223ENST00000542552 TRMT1LQ7Z2T5 733 aaKnown RBP17.37■□□□□ 0.37
ECHDC2-223ENST00000542552 TMCO2Q7Z6W1 182 aaPredicted RBP17.37■□□□□ 0.37
ECHDC2-223ENST00000542552 NOSTRINQ8IVI9 506 aa17.37■□□□□ 0.37
ECHDC2-223ENST00000542552 BANK1Q8NDB2 785 aa17.37■□□□□ 0.37
ECHDC2-223ENST00000542552 AGO3Q9H9G7 860 aaKnown RBP17.37■□□□□ 0.37
ECHDC2-223ENST00000542552 REV3LO60673 3130 aa17.36■□□□□ 0.37
ECHDC2-223ENST00000542552 KIF28PB7ZC32 967 aa17.36■□□□□ 0.37
ECHDC2-223ENST00000542552 M0QZ92 97 aa17.36■□□□□ 0.37
ECHDC2-223ENST00000542552 MARCH6O60337 910 aa17.36■□□□□ 0.37
ECHDC2-223ENST00000542552 P4HBP07237 508 aaKnown RBP17.36■□□□□ 0.37
ECHDC2-223ENST00000542552 CA3P07451 260 aa17.36■□□□□ 0.37
ECHDC2-223ENST00000542552 QARSP47897 775 aaKnown RBP17.36■□□□□ 0.37
ECHDC2-223ENST00000542552 ORC2Q13416 577 aaPredicted RBP17.36■□□□□ 0.37
ECHDC2-223ENST00000542552 ANO5Q75V66 913 aa17.36■□□□□ 0.37
ECHDC2-223ENST00000542552 CDHR5Q9HBB8 845 aa17.36■□□□□ 0.37
ECHDC2-223ENST00000542552 PCDHA12Q9UN75 941 aa17.36■□□□□ 0.37
ECHDC2-223ENST00000542552 UNC80Q8N2C7 3258 aa17.35■□□□□ 0.37
ECHDC2-223ENST00000542552 TMEM150BA6NC51 233 aa17.35■□□□□ 0.37
ECHDC2-223ENST00000542552 TLL1O43897 1013 aa17.35■□□□□ 0.37
ECHDC2-223ENST00000542552 GPR32O75388 356 aa17.35■□□□□ 0.37
ECHDC2-223ENST00000542552 AMHP03971 560 aa17.35■□□□□ 0.37
ECHDC2-223ENST00000542552 CD52P31358 61 aa17.35■□□□□ 0.37
ECHDC2-223ENST00000542552 EFCAB12Q6NXP0 572 aa17.35■□□□□ 0.37
ECHDC2-223ENST00000542552 METTL13Q8N6R0 699 aa17.35■□□□□ 0.37
ECHDC2-223ENST00000542552 MYLIPQ8WY64 445 aa17.35■□□□□ 0.37
ECHDC2-223ENST00000542552 TOP1MTQ969P6 601 aa17.35■□□□□ 0.37
ECHDC2-223ENST00000542552 RAD9AQ99638 391 aa17.35■□□□□ 0.37
ECHDC2-223ENST00000542552 TMEM60Q9H2L4 133 aa17.35■□□□□ 0.37
ECHDC2-223ENST00000542552 WRAP73Q9P2S5 460 aaPredicted RBP17.35■□□□□ 0.37
ECHDC2-223ENST00000542552 PADI3Q9ULW8 664 aa17.35■□□□□ 0.37
ECHDC2-223ENST00000542552 KIF3AQ9Y496 699 aa17.35■□□□□ 0.37
ECHDC2-223ENST00000542552 MYO9BQ13459 2157 aa17.35■□□□□ 0.37
ECHDC2-223ENST00000542552 A0A0C4DFX4 3053 aa17.34■□□□□ 0.37
ECHDC2-223ENST00000542552 IGKV6-21A0A0C4DH24 114 aa17.34■□□□□ 0.37
ECHDC2-223ENST00000542552 DDX11L8A8MPP1 907 aa17.34■□□□□ 0.37
ECHDC2-223ENST00000542552 ENPP3O14638 875 aa17.34■□□□□ 0.37
ECHDC2-223ENST00000542552 DKC1O60832 514 aaKnown RBP eCLIP17.34■□□□□ 0.37
ECHDC2-223ENST00000542552 ARHGEF15O94989 841 aa17.34■□□□□ 0.37
ECHDC2-223ENST00000542552 TRAPPC10P48553 1259 aa17.34■□□□□ 0.37
ECHDC2-223ENST00000542552 CLCN3P51790 818 aa17.34■□□□□ 0.37
ECHDC2-223ENST00000542552 CRYBB1P53674 252 aaPredicted RBP17.34■□□□□ 0.37
ECHDC2-223ENST00000542552 HTRA4P83105 476 aaPredicted RBP17.34■□□□□ 0.37
ECHDC2-223ENST00000542552 TAP1Q03518 808 aa17.34■□□□□ 0.37
ECHDC2-223ENST00000542552 PPP2R2DQ66LE6 453 aa17.34■□□□□ 0.37
ECHDC2-223ENST00000542552 NCAPH2Q6IBW4 605 aa17.34■□□□□ 0.37
ECHDC2-223ENST00000542552 FAM43BQ6ZT52 329 aaPredicted RBP17.34■□□□□ 0.37
ECHDC2-223ENST00000542552 C4orf19Q8IY42 314 aa17.34■□□□□ 0.37
ECHDC2-223ENST00000542552 ZNF710Q8N1W2 664 aa17.34■□□□□ 0.37
ECHDC2-223ENST00000542552 HSD17B14Q9BPX1 270 aa17.34■□□□□ 0.37
ECHDC2-223ENST00000542552 TTC12Q9H892 705 aaPredicted RBP17.34■□□□□ 0.37
ECHDC2-223ENST00000542552 SEPT9Q9UHD8 586 aaPredicted RBP17.34■□□□□ 0.37
ECHDC2-223ENST00000542552 TTC3P53804 2025 aa17.33■□□□□ 0.37
ECHDC2-223ENST00000542552 LCHNA4D1U4 455 aa17.33■□□□□ 0.36
ECHDC2-223ENST00000542552 SLITRK3O94933 977 aa17.33■□□□□ 0.36
ECHDC2-223ENST00000542552 VTNP04004 478 aa17.33■□□□□ 0.36
ECHDC2-223ENST00000542552 ATP2B1P20020 1258 aa17.33■□□□□ 0.36
ECHDC2-223ENST00000542552 TMOD1P28289 359 aa17.33■□□□□ 0.36
ECHDC2-223ENST00000542552 GJB2P29033 226 aa17.33■□□□□ 0.36
ECHDC2-223ENST00000542552 MCM7P33993 719 aa17.33■□□□□ 0.36
ECHDC2-223ENST00000542552 TXKP42681 527 aa17.33■□□□□ 0.36
ECHDC2-223ENST00000542552 TOB1P50616 345 aaPredicted RBP17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms