RNA–Protein interactions for RNA: ENST00000542340.1

CACNA2D4-215, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, humanhuman

TSL 3

Gene CACNA2D4, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4-215ENST00000542340 ORC2Q13416 577 aaPredicted RBP22.57■■□□□ 1.2
CACNA2D4-215ENST00000542340 MKRN4PQ13434 485 aaPredicted RBP22.57■■□□□ 1.2
CACNA2D4-215ENST00000542340 LPIN1Q14693 890 aa22.57■■□□□ 1.2
CACNA2D4-215ENST00000542340 EPHA7Q15375 998 aa22.57■■□□□ 1.2
CACNA2D4-215ENST00000542340 FBXO47Q5MNV8 452 aa22.57■■□□□ 1.2
CACNA2D4-215ENST00000542340 USP38Q8NB14 1042 aa22.57■■□□□ 1.2
CACNA2D4-215ENST00000542340 FAM161BQ96MY7 647 aa22.57■■□□□ 1.2
CACNA2D4-215ENST00000542340 MTMR9Q96QG7 549 aa22.57■■□□□ 1.2
CACNA2D4-215ENST00000542340 NIFKQ9BYG3 293 aaKnown RBP22.57■■□□□ 1.2
CACNA2D4-215ENST00000542340 IFIH1Q9BYX4 1025 aaKnown RBP22.57■■□□□ 1.2
CACNA2D4-215ENST00000542340 CELF4Q9BZC1 486 aaKnown RBP22.57■■□□□ 1.2
CACNA2D4-215ENST00000542340 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.57■■□□□ 1.2
CACNA2D4-215ENST00000542340 TRPV2Q9Y5S1 764 aa22.57■■□□□ 1.2
CACNA2D4-215ENST00000542340 KDM3AQ9Y4C1 1321 aa22.57■■□□□ 1.2
CACNA2D4-215ENST00000542340 DKC1O60832 514 aaKnown RBP eCLIP22.56■■□□□ 1.2
CACNA2D4-215ENST00000542340 P4HBP07237 508 aaKnown RBP22.56■■□□□ 1.2
CACNA2D4-215ENST00000542340 GHRP10912 638 aa22.56■■□□□ 1.2
CACNA2D4-215ENST00000542340 ATP2B1P20020 1258 aa22.56■■□□□ 1.2
CACNA2D4-215ENST00000542340 GJB2P29033 226 aa22.56■■□□□ 1.2
CACNA2D4-215ENST00000542340 QARSP47897 775 aaKnown RBP22.56■■□□□ 1.2
CACNA2D4-215ENST00000542340 TRAPPC10P48553 1259 aa22.56■■□□□ 1.2
CACNA2D4-215ENST00000542340 TARBP2Q15633 366 aaKnown RBP22.56■■□□□ 1.2
CACNA2D4-215ENST00000542340 BANK1Q8NDB2 785 aa22.56■■□□□ 1.2
CACNA2D4-215ENST00000542340 ZNF576Q9H609 170 aa22.56■■□□□ 1.2
CACNA2D4-215ENST00000542340 SMC3Q9UQE7 1217 aa22.56■■□□□ 1.2
CACNA2D4-215ENST00000542340 YBX2Q9Y2T7 364 aaKnown RBP22.56■■□□□ 1.2
CACNA2D4-215ENST00000542340 WDR81Q562E7 1941 aa22.56■■□□□ 1.2
CACNA2D4-215ENST00000542340 KIF28PB7ZC32 967 aa22.55■■□□□ 1.2
CACNA2D4-215ENST00000542340 MCM7P33993 719 aa22.55■■□□□ 1.2
CACNA2D4-215ENST00000542340 DEFB103AP81534 67 aa22.55■■□□□ 1.2
CACNA2D4-215ENST00000542340 TMEM62Q0P6H9 643 aa22.55■■□□□ 1.2
CACNA2D4-215ENST00000542340 NCAPH2Q6IBW4 605 aa22.55■■□□□ 1.2
CACNA2D4-215ENST00000542340 TSHZ1Q6ZSZ6 1077 aa22.55■■□□□ 1.2
CACNA2D4-215ENST00000542340 TTC12Q9H892 705 aaPredicted RBP22.55■■□□□ 1.2
CACNA2D4-215ENST00000542340 SLC28A3Q9HAS3 691 aa22.55■■□□□ 1.2
CACNA2D4-215ENST00000542340 NOL7Q9UMY1 257 aaKnown RBP22.55■■□□□ 1.2
CACNA2D4-215ENST00000542340 RBAK-RBAKDNI3L0D1 243 aa22.54■■□□□ 1.2
CACNA2D4-215ENST00000542340 AMHP03971 560 aa22.54■■□□□ 1.2
CACNA2D4-215ENST00000542340 TMOD1P28289 359 aa22.54■■□□□ 1.2
CACNA2D4-215ENST00000542340 TXKP42681 527 aa22.54■■□□□ 1.2
CACNA2D4-215ENST00000542340 CUL4AQ13619 759 aa22.54■■□□□ 1.2
CACNA2D4-215ENST00000542340 EFCAB12Q6NXP0 572 aa22.54■■□□□ 1.2
CACNA2D4-215ENST00000542340 LIN28BQ6ZN17 250 aaKnown RBP eCLIP22.54■■□□□ 1.2
CACNA2D4-215ENST00000542340 METTL13Q8N6R0 699 aa22.54■■□□□ 1.2
CACNA2D4-215ENST00000542340 LINC01465Q8N7H1 131 aa22.54■■□□□ 1.2
CACNA2D4-215ENST00000542340 GUCD1Q96NT3 240 aa22.54■■□□□ 1.2
CACNA2D4-215ENST00000542340 TMEM60Q9H2L4 133 aa22.54■■□□□ 1.2
CACNA2D4-215ENST00000542340 NKX2-4Q9H2Z4 354 aa22.54■■□□□ 1.2
CACNA2D4-215ENST00000542340 SEPT9Q9UHD8 586 aaPredicted RBP22.54■■□□□ 1.2
CACNA2D4-215ENST00000542340 DDX11L8A8MPP1 907 aa22.53■■□□□ 1.2
CACNA2D4-215ENST00000542340 MYOGP15173 224 aa22.53■■□□□ 1.2
CACNA2D4-215ENST00000542340 TBC1D8BQ0IIM8 1120 aa22.53■■□□□ 1.2
CACNA2D4-215ENST00000542340 ZNF174Q15697 407 aa22.53■■□□□ 1.2
CACNA2D4-215ENST00000542340 TTC38Q5R3I4 469 aa22.53■■□□□ 1.2
CACNA2D4-215ENST00000542340 ANO5Q75V66 913 aa22.53■■□□□ 1.2
CACNA2D4-215ENST00000542340 C4orf19Q8IY42 314 aa22.53■■□□□ 1.2
CACNA2D4-215ENST00000542340 ZNF710Q8N1W2 664 aa22.53■■□□□ 1.2
CACNA2D4-215ENST00000542340 CEP89Q96ST8 783 aa22.53■■□□□ 1.2
CACNA2D4-215ENST00000542340 AGO3Q9H9G7 860 aaKnown RBP22.53■■□□□ 1.2
CACNA2D4-215ENST00000542340 GJB5O95377 273 aa22.52■■□□□ 1.2
CACNA2D4-215ENST00000542340 CLCN3P51790 818 aa22.52■■□□□ 1.2
CACNA2D4-215ENST00000542340 MTERF2Q49AM1 385 aa22.52■■□□□ 1.2
CACNA2D4-215ENST00000542340 FAM43BQ6ZT52 329 aaPredicted RBP22.52■■□□□ 1.2
CACNA2D4-215ENST00000542340 MAP7D2Q96T17 732 aa22.52■■□□□ 1.2
CACNA2D4-215ENST00000542340 CDX2Q99626 313 aaPredicted RBP22.52■■□□□ 1.2
CACNA2D4-215ENST00000542340 ZBED2Q9BTP6 218 aa22.52■■□□□ 1.2
CACNA2D4-215ENST00000542340 ZSWIM4Q9H7M6 989 aa22.52■■□□□ 1.2
CACNA2D4-215ENST00000542340 STXBP5LQ9Y2K9 1186 aa22.52■■□□□ 1.2
CACNA2D4-215ENST00000542340 CHD9Q3L8U1 2897 aa22.52■■□□□ 1.19
CACNA2D4-215ENST00000542340 LOC101059915A0A1B0GWI6 518 aaPredicted RBP22.51■■□□□ 1.19
CACNA2D4-215ENST00000542340 H3BQV1 296 aa22.51■■□□□ 1.19
CACNA2D4-215ENST00000542340 TLL1O43897 1013 aa22.51■■□□□ 1.19
CACNA2D4-215ENST00000542340 CD52P31358 61 aa22.51■■□□□ 1.19
CACNA2D4-215ENST00000542340 CRYBB1P53674 252 aaPredicted RBP22.51■■□□□ 1.19
CACNA2D4-215ENST00000542340 TMCO2Q7Z6W1 182 aaPredicted RBP22.51■■□□□ 1.19
CACNA2D4-215ENST00000542340 LRRC71Q8N4P6 559 aa22.51■■□□□ 1.19
CACNA2D4-215ENST00000542340 NEK9Q8TD19 979 aa22.51■■□□□ 1.19
CACNA2D4-215ENST00000542340 DYDC2Q96IM9 177 aa22.51■■□□□ 1.19
CACNA2D4-215ENST00000542340 RAD9AQ99638 391 aa22.51■■□□□ 1.19
CACNA2D4-215ENST00000542340 HSD17B14Q9BPX1 270 aa22.51■■□□□ 1.19
CACNA2D4-215ENST00000542340 LXNQ9BS40 222 aa22.51■■□□□ 1.19
CACNA2D4-215ENST00000542340 SUGCTQ9HAC7 445 aa22.51■■□□□ 1.19
CACNA2D4-215ENST00000542340 RGL1Q9NZL6 768 aa22.51■■□□□ 1.19
CACNA2D4-215ENST00000542340 WRAP73Q9P2S5 460 aaPredicted RBP22.51■■□□□ 1.19
CACNA2D4-215ENST00000542340 PPME1Q9Y570 386 aa22.51■■□□□ 1.19
CACNA2D4-215ENST00000542340 SIP14410 1827 aa22.5■■□□□ 1.19
CACNA2D4-215ENST00000542340 IGKV6-21A0A0C4DH24 114 aa22.5■■□□□ 1.19
CACNA2D4-215ENST00000542340 TMEM150BA6NC51 233 aa22.5■■□□□ 1.19
CACNA2D4-215ENST00000542340 GPR32O75388 356 aa22.5■■□□□ 1.19
CACNA2D4-215ENST00000542340 SLITRK3O94933 977 aa22.5■■□□□ 1.19
CACNA2D4-215ENST00000542340 VTNP04004 478 aa22.5■■□□□ 1.19
CACNA2D4-215ENST00000542340 CA3P07451 260 aa22.5■■□□□ 1.19
CACNA2D4-215ENST00000542340 OR52Z1P0C646 297 aa22.5■■□□□ 1.19
CACNA2D4-215ENST00000542340 GRIN2CQ14957 1233 aa22.5■■□□□ 1.19
CACNA2D4-215ENST00000542340 LARP1BQ659C4 914 aaKnown RBP22.5■■□□□ 1.19
CACNA2D4-215ENST00000542340 PPP2R2DQ66LE6 453 aa22.5■■□□□ 1.19
CACNA2D4-215ENST00000542340 MYOCDQ8IZQ8 938 aa22.5■■□□□ 1.19
CACNA2D4-215ENST00000542340 EIF2AK1Q9BQI3 630 aaKnown RBP22.5■■□□□ 1.19
CACNA2D4-215ENST00000542340 CDHR5Q9HBB8 845 aa22.5■■□□□ 1.19
CACNA2D4-215ENST00000542340 CYP26B1Q9NR63 512 aa22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms