RNA–Protein interactions for RNA: ENST00000542328.5

ABCB8-222, Transcript of ATP binding cassette subfamily B member 8, human

TSL 2 BASIC

Gene ABCB8, Length 4,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCB8-222	ENST00000542328	NRAP	Q86VF7	1730 aa		13.5	□□□□□ -0.25
ABCB8-222	ENST00000542328	ASTN2	O75129	1339 aa	Predicted RBP	13.5	□□□□□ -0.25
ABCB8-222	ENST00000542328	TUBB	P07437	444 aa		13.5	□□□□□ -0.25
ABCB8-222	ENST00000542328	YWHAB	P31946	246 aa	Known RBP	13.5	□□□□□ -0.25
ABCB8-222	ENST00000542328	SMC1A	Q14683	1233 aa	Known RBP	13.5	□□□□□ -0.25
ABCB8-222	ENST00000542328	ZRSR2	Q15696	482 aa	Known RBP	13.5	□□□□□ -0.25
ABCB8-222	ENST00000542328	ARHGAP44	Q17R89	818 aa		13.5	□□□□□ -0.25
ABCB8-222	ENST00000542328	SFMBT2	Q5VUG0	894 aa		13.5	□□□□□ -0.25
ABCB8-222	ENST00000542328	CLMN	Q96JQ2	1002 aa		13.5	□□□□□ -0.25
ABCB8-222	ENST00000542328	FAM107B	Q9H098	131 aa		13.5	□□□□□ -0.25
ABCB8-222	ENST00000542328		A0A1W2PRG0	241 aa		13.5	□□□□□ -0.25
ABCB8-222	ENST00000542328	DGAT1	O75907	488 aa		13.5	□□□□□ -0.25
ABCB8-222	ENST00000542328	PGK2	P07205	417 aa		13.5	□□□□□ -0.25
ABCB8-222	ENST00000542328	CYP2C8	P10632	490 aa		13.5	□□□□□ -0.25
ABCB8-222	ENST00000542328	TNNC1	P63316	161 aa		13.5	□□□□□ -0.25
ABCB8-222	ENST00000542328	NFX1	Q12986	1120 aa	Known RBP	13.5	□□□□□ -0.25
ABCB8-222	ENST00000542328	NOG	Q13253	232 aa		13.5	□□□□□ -0.25
ABCB8-222	ENST00000542328	SURF1	Q15526	300 aa		13.5	□□□□□ -0.25
ABCB8-222	ENST00000542328	MYRIP	Q8NFW9	859 aa		13.5	□□□□□ -0.25
ABCB8-222	ENST00000542328	PPP1R16B	Q96T49	567 aa		13.5	□□□□□ -0.25
ABCB8-222	ENST00000542328	CCDC94	Q9BW85	323 aa	Predicted RBP	13.5	□□□□□ -0.25
ABCB8-222	ENST00000542328	PCIF1	Q9H4Z3	704 aa		13.5	□□□□□ -0.25
ABCB8-222	ENST00000542328	PARP2	Q9UGN5	583 aa		13.5	□□□□□ -0.25
ABCB8-222	ENST00000542328	GDA	Q9Y2T3	454 aa		13.5	□□□□□ -0.25
ABCB8-222	ENST00000542328	ZNF500	O60304	480 aa	Predicted RBP	13.49	□□□□□ -0.25
ABCB8-222	ENST00000542328	RARB	P10826	455 aa		13.49	□□□□□ -0.25
ABCB8-222	ENST00000542328	RPA1	P27694	616 aa		13.49	□□□□□ -0.25
ABCB8-222	ENST00000542328	ERVK-9	P63128	1117 aa		13.49	□□□□□ -0.25
ABCB8-222	ENST00000542328	ERVK-24	P63145	666 aa		13.49	□□□□□ -0.25
ABCB8-222	ENST00000542328	COASY	Q13057	564 aa		13.49	□□□□□ -0.25
ABCB8-222	ENST00000542328	ZNF746	Q6NUN9	644 aa	Predicted RBP	13.49	□□□□□ -0.25
ABCB8-222	ENST00000542328	WNK4	Q96J92	1243 aa		13.49	□□□□□ -0.25
ABCB8-222	ENST00000542328	NMRK2	Q9NPI5	230 aa		13.49	□□□□□ -0.25
ABCB8-222	ENST00000542328	PXMP2	Q9NR77	195 aa		13.49	□□□□□ -0.25
ABCB8-222	ENST00000542328	MSH4	O15457	936 aa		13.49	□□□□□ -0.25
ABCB8-222	ENST00000542328	USP2	O75604	605 aa	Predicted RBP	13.49	□□□□□ -0.25
ABCB8-222	ENST00000542328	LDHA	P00338	332 aa	Known RBP	13.49	□□□□□ -0.25
ABCB8-222	ENST00000542328	MAN2A1	Q16706	1144 aa		13.49	□□□□□ -0.25
ABCB8-222	ENST00000542328	PTPN21	Q16825	1174 aa		13.49	□□□□□ -0.25
ABCB8-222	ENST00000542328	PCNX4	Q63HM2	1172 aa		13.49	□□□□□ -0.25
ABCB8-222	ENST00000542328	BTNL9	Q6UXG8	535 aa		13.49	□□□□□ -0.25
ABCB8-222	ENST00000542328	SPOP	O43791	374 aa		13.49	□□□□□ -0.25
ABCB8-222	ENST00000542328	STAT1	P42224	750 aa		13.49	□□□□□ -0.25
ABCB8-222	ENST00000542328	CACTIN	Q8WUQ7	758 aa	Known RBP	13.49	□□□□□ -0.25
ABCB8-222	ENST00000542328	IFIH1	Q9BYX4	1025 aa	Known RBP	13.49	□□□□□ -0.25
ABCB8-222	ENST00000542328	PYCARD	Q9ULZ3	195 aa		13.49	□□□□□ -0.25
ABCB8-222	ENST00000542328	CASP1	P29466	404 aa		13.48	□□□□□ -0.25
ABCB8-222	ENST00000542328	TNFAIP2	Q03169	654 aa		13.48	□□□□□ -0.25
ABCB8-222	ENST00000542328	ELF2	Q15723	593 aa		13.48	□□□□□ -0.25
ABCB8-222	ENST00000542328	EXOC3L4	Q17RC7	722 aa		13.48	□□□□□ -0.25
ABCB8-222	ENST00000542328	ANKRD36BP1	Q96IX9	119 aa		13.48	□□□□□ -0.25
ABCB8-222	ENST00000542328	POLR3F	Q9H1D9	316 aa	Predicted RBP	13.48	□□□□□ -0.25
ABCB8-222	ENST00000542328	LRFN2	Q9ULH4	789 aa		13.48	□□□□□ -0.25
ABCB8-222	ENST00000542328	TLR3	O15455	904 aa	Known RBP	13.48	□□□□□ -0.25
ABCB8-222	ENST00000542328	GSTA5	Q7RTV2	222 aa		13.48	□□□□□ -0.25
ABCB8-222	ENST00000542328	CCDC155	Q8N6L0	562 aa		13.48	□□□□□ -0.25
ABCB8-222	ENST00000542328	BBX	Q8WY36	941 aa	Predicted RBP	13.48	□□□□□ -0.25
ABCB8-222	ENST00000542328	MAGEB2	O15479	319 aa		13.48	□□□□□ -0.25
ABCB8-222	ENST00000542328	PLA2G6	O60733	806 aa		13.48	□□□□□ -0.25
ABCB8-222	ENST00000542328	EZR	P15311	586 aa	Known RBP	13.48	□□□□□ -0.25
ABCB8-222	ENST00000542328	PPFIA1	Q13136	1202 aa		13.48	□□□□□ -0.25
ABCB8-222	ENST00000542328	RIOX2	Q8IUF8	465 aa		13.48	□□□□□ -0.25
ABCB8-222	ENST00000542328	MSTO1	Q9BUK6	570 aa		13.48	□□□□□ -0.25
ABCB8-222	ENST00000542328	THAP9	Q9H5L6	903 aa		13.48	□□□□□ -0.25
ABCB8-222	ENST00000542328	SPEF2	Q9C093	1822 aa		13.48	□□□□□ -0.25
ABCB8-222	ENST00000542328	ZNF233	A6NK53	670 aa		13.48	□□□□□ -0.25
ABCB8-222	ENST00000542328	SLC16A4	O15374	487 aa		13.48	□□□□□ -0.25
ABCB8-222	ENST00000542328	NUP188	Q5SRE5	1749 aa		13.48	□□□□□ -0.25
ABCB8-222	ENST00000542328	ZBTB33	Q86T24	672 aa		13.48	□□□□□ -0.25
ABCB8-222	ENST00000542328	MKRN1	Q9UHC7	482 aa	Known RBP	13.48	□□□□□ -0.25
ABCB8-222	ENST00000542328	ATRNL1	Q5VV63	1379 aa		13.47	□□□□□ -0.25
ABCB8-222	ENST00000542328	DENND3	A2RUS2	1198 aa		13.47	□□□□□ -0.25
ABCB8-222	ENST00000542328	TMEM88B	A6NKF7	163 aa		13.47	□□□□□ -0.25
ABCB8-222	ENST00000542328	SLC37A4	O43826	429 aa		13.47	□□□□□ -0.25
ABCB8-222	ENST00000542328	LPXN	O60711	386 aa		13.47	□□□□□ -0.25
ABCB8-222	ENST00000542328	AFP	P02771	609 aa	Known RBP	13.47	□□□□□ -0.25
ABCB8-222	ENST00000542328	KCNA3	P22001	575 aa		13.47	□□□□□ -0.25
ABCB8-222	ENST00000542328	MYL7	Q01449	175 aa		13.47	□□□□□ -0.25
ABCB8-222	ENST00000542328	LIN9	Q5TKA1	542 aa		13.47	□□□□□ -0.25
ABCB8-222	ENST00000542328	RHPN2	Q8IUC4	686 aa		13.47	□□□□□ -0.25
ABCB8-222	ENST00000542328	POLR3C	Q9BUI4	534 aa	Predicted RBP	13.47	□□□□□ -0.25
ABCB8-222	ENST00000542328	TMEM106C	Q9BVX2	250 aa		13.47	□□□□□ -0.25
ABCB8-222	ENST00000542328	GCOM2	Q9BZD3	368 aa	Predicted RBP	13.47	□□□□□ -0.25
ABCB8-222	ENST00000542328	KCND2	Q9NZV8	630 aa		13.47	□□□□□ -0.25
ABCB8-222	ENST00000542328	ODF2L	Q9ULJ1	636 aa		13.47	□□□□□ -0.25
ABCB8-222	ENST00000542328	NUB1	Q9Y5A7	615 aa		13.47	□□□□□ -0.25
ABCB8-222	ENST00000542328	KBTBD13	C9JR72	458 aa		13.47	□□□□□ -0.25
ABCB8-222	ENST00000542328	ETF1	P62495	437 aa	Known RBP	13.47	□□□□□ -0.25
ABCB8-222	ENST00000542328	ST3GAL1	Q11201	340 aa		13.47	□□□□□ -0.25
ABCB8-222	ENST00000542328	PPM1K	Q8N3J5	372 aa		13.47	□□□□□ -0.25
ABCB8-222	ENST00000542328	NT5C1B	Q96P26	610 aa		13.47	□□□□□ -0.25
ABCB8-222	ENST00000542328	FERMT1	Q9BQL6	677 aa		13.47	□□□□□ -0.25
ABCB8-222	ENST00000542328	TRIM9	Q9C026	710 aa		13.47	□□□□□ -0.25
ABCB8-222	ENST00000542328	KIAA1586	Q9HCI6	787 aa		13.47	□□□□□ -0.25
ABCB8-222	ENST00000542328	ANKEF1	Q9NU02	776 aa		13.47	□□□□□ -0.25
ABCB8-222	ENST00000542328	ERAP1	Q9NZ08	941 aa		13.47	□□□□□ -0.25
ABCB8-222	ENST00000542328	FAM170A	A1A519	330 aa		13.47	□□□□□ -0.25
ABCB8-222	ENST00000542328	FOXP2	O15409	715 aa		13.47	□□□□□ -0.25
ABCB8-222	ENST00000542328	HIP1R	O75146	1068 aa		13.47	□□□□□ -0.25
ABCB8-222	ENST00000542328	PRKCE	Q02156	737 aa		13.47	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms